RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 NLRP10Q86W26 655 aa17.74■□□□□ 0.43
PRKCH-206ENST00000553830 GNAI3P08754 354 aa17.73■□□□□ 0.43
PRKCH-206ENST00000553830 ZNF34Q8IZ26 560 aa17.73■□□□□ 0.43
PRKCH-206ENST00000553830 CCDC191Q8NCU4 936 aa17.73■□□□□ 0.43
PRKCH-206ENST00000553830 FLAD1Q8NFF5 587 aa17.73■□□□□ 0.43
PRKCH-206ENST00000553830 ZBTB40Q9NUA8 1239 aa17.73■□□□□ 0.43
PRKCH-206ENST00000553830 LRRFIP2Q9Y608 721 aaKnown RBP17.73■□□□□ 0.43
PRKCH-206ENST00000553830 MSL1Q68DK7 614 aa17.72■□□□□ 0.43
PRKCH-206ENST00000553830 COL24A1Q17RW2 1714 aa17.72■□□□□ 0.43
PRKCH-206ENST00000553830 MYH3P11055 1940 aa17.71■□□□□ 0.43
PRKCH-206ENST00000553830 GNAI2P04899 355 aa17.71■□□□□ 0.43
PRKCH-206ENST00000553830 GYS1P13807 737 aa17.71■□□□□ 0.43
PRKCH-206ENST00000553830 SUSD4Q5VX71 490 aa17.71■□□□□ 0.43
PRKCH-206ENST00000553830 ERICH6BQ5W0A0 696 aa17.71■□□□□ 0.43
PRKCH-206ENST00000553830 B4GALNT3Q6L9W6 998 aa17.71■□□□□ 0.43
PRKCH-206ENST00000553830 CLEC4GQ6UXB4 293 aa17.71■□□□□ 0.43
PRKCH-206ENST00000553830 SUCLG2Q96I99 432 aa17.71■□□□□ 0.43
PRKCH-206ENST00000553830 PPP4R2Q9NY27 417 aa17.71■□□□□ 0.43
PRKCH-206ENST00000553830 TRMT112Q9UI30 125 aaKnown RBP17.71■□□□□ 0.43
PRKCH-206ENST00000553830 CASZ1Q86V15 1759 aa17.71■□□□□ 0.43
PRKCH-206ENST00000553830 SYNE4Q8N205 404 aa17.7■□□□□ 0.42
PRKCH-206ENST00000553830 FAM89AQ96GI7 184 aa17.7■□□□□ 0.42
PRKCH-206ENST00000553830 CCDC136Q96JN2 1154 aa17.7■□□□□ 0.42
PRKCH-206ENST00000553830 SETDB2Q96T68 719 aa17.7■□□□□ 0.42
PRKCH-206ENST00000553830 PCDHB15Q9Y5E8 787 aa17.7■□□□□ 0.42
PRKCH-206ENST00000553830 NPHP1O15259 732 aa17.69■□□□□ 0.42
PRKCH-206ENST00000553830 TRIM28Q13263 835 aaKnown RBP17.69■□□□□ 0.42
PRKCH-206ENST00000553830 NFIXQ14938 502 aa17.69■□□□□ 0.42
PRKCH-206ENST00000553830 PARP10Q53GL7 1025 aa17.69■□□□□ 0.42
PRKCH-206ENST00000553830 NUTM1Q86Y26 1132 aa17.69■□□□□ 0.42
PRKCH-206ENST00000553830 UTP14AQ9BVJ6 771 aaKnown RBP17.69■□□□□ 0.42
PRKCH-206ENST00000553830 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
PRKCH-206ENST00000553830 GTF2E1P29083 439 aaPredicted RBP17.68■□□□□ 0.42
PRKCH-206ENST00000553830 PPP1R42Q7Z4L9 355 aa17.68■□□□□ 0.42
PRKCH-206ENST00000553830 DDX60Q8IY21 1712 aaKnown RBP17.68■□□□□ 0.42
PRKCH-206ENST00000553830 CCDC24Q8N4L8 307 aa17.68■□□□□ 0.42
PRKCH-206ENST00000553830 PDGFDQ9GZP0 370 aaPredicted RBP17.68■□□□□ 0.42
PRKCH-206ENST00000553830 LAMB2P55268 1798 aa17.67■□□□□ 0.42
PRKCH-206ENST00000553830 H7C1W4 665 aa17.67■□□□□ 0.42
PRKCH-206ENST00000553830 R3HDM1Q15032 1099 aaKnown RBP17.67■□□□□ 0.42
PRKCH-206ENST00000553830 NBPF5PQ86XG9 351 aaPredicted RBP17.67■□□□□ 0.42
PRKCH-206ENST00000553830 ZBTB38Q8NAP3 1195 aaPredicted RBP17.67■□□□□ 0.42
PRKCH-206ENST00000553830 UTYO14607 1347 aa17.67■□□□□ 0.42
PRKCH-206ENST00000553830 PSDA5PKW4 1024 aaPredicted RBP17.66■□□□□ 0.42
PRKCH-206ENST00000553830 NTSR2O95665 410 aa17.66■□□□□ 0.42
PRKCH-206ENST00000553830 CASP7P55210 303 aa17.66■□□□□ 0.42
PRKCH-206ENST00000553830 AAMPQ13685 434 aa17.66■□□□□ 0.42
PRKCH-206ENST00000553830 BICC1Q9H694 974 aaKnown RBP17.66■□□□□ 0.42
PRKCH-206ENST00000553830 CHMP3Q9Y3E7 222 aa17.66■□□□□ 0.42
PRKCH-206ENST00000553830 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
PRKCH-206ENST00000553830 IRS4O14654 1257 aaPredicted RBP17.65■□□□□ 0.42
PRKCH-206ENST00000553830 RGL2O15211 777 aa17.65■□□□□ 0.42
PRKCH-206ENST00000553830 HCLS1P14317 486 aaPredicted RBP17.65■□□□□ 0.42
PRKCH-206ENST00000553830 ERFEQ4G0M1 354 aa17.65■□□□□ 0.42
PRKCH-206ENST00000553830 EPHA10Q5JZY3 1008 aa17.65■□□□□ 0.42
PRKCH-206ENST00000553830 CEP85Q6P2H3 762 aa17.65■□□□□ 0.42
PRKCH-206ENST00000553830 CCDC85AQ96PX6 553 aaPredicted RBP17.65■□□□□ 0.42
PRKCH-206ENST00000553830 HDAC5Q9UQL6 1122 aa17.65■□□□□ 0.42
PRKCH-206ENST00000553830 SH3TC1Q8TE82 1336 aa17.65■□□□□ 0.42
PRKCH-206ENST00000553830 DDR1Q08345 913 aa17.64■□□□□ 0.41
PRKCH-206ENST00000553830 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
PRKCH-206ENST00000553830 MMP10P09238 476 aa17.63■□□□□ 0.41
PRKCH-206ENST00000553830 NLGN1Q8N2Q7 840 aa17.63■□□□□ 0.41
PRKCH-206ENST00000553830 ANKRD44Q8N8A2 993 aa17.63■□□□□ 0.41
PRKCH-206ENST00000553830 NYXQ9GZU5 481 aa17.63■□□□□ 0.41
PRKCH-206ENST00000553830 ABCC12Q96J65 1359 aa17.63■□□□□ 0.41
PRKCH-206ENST00000553830 IBTKQ9P2D0 1353 aaPredicted RBP17.63■□□□□ 0.41
PRKCH-206ENST00000553830 SPEF2Q9C093 1822 aa17.63■□□□□ 0.41
PRKCH-206ENST00000553830 TNRC6CQ9HCJ0 1690 aaKnown RBP17.62■□□□□ 0.41
PRKCH-206ENST00000553830 PNMA6EA0A0J9YXQ4 647 aa17.62■□□□□ 0.41
PRKCH-206ENST00000553830 IGHDP01880 384 aa17.62■□□□□ 0.41
PRKCH-206ENST00000553830 SERPINB2P05120 415 aa17.62■□□□□ 0.41
PRKCH-206ENST00000553830 TM4SF1P30408 202 aa17.62■□□□□ 0.41
PRKCH-206ENST00000553830 SIRT2Q8IXJ6 389 aa17.62■□□□□ 0.41
PRKCH-206ENST00000553830 CNBD1Q8NA66 436 aa17.62■□□□□ 0.41
PRKCH-206ENST00000553830 RWDD1Q9H446 243 aaPredicted RBP17.62■□□□□ 0.41
PRKCH-206ENST00000553830 CDHR2Q9BYE9 1310 aa17.62■□□□□ 0.41
PRKCH-206ENST00000553830 POLRMTO00411 1230 aaKnown RBP17.61■□□□□ 0.41
PRKCH-206ENST00000553830 SRGAP3O43295 1099 aa17.61■□□□□ 0.41
PRKCH-206ENST00000553830 ZBTB7AO95365 584 aa17.61■□□□□ 0.41
PRKCH-206ENST00000553830 FOXO4P98177 505 aa17.61■□□□□ 0.41
PRKCH-206ENST00000553830 ATP8B2P98198 1209 aa17.61■□□□□ 0.41
PRKCH-206ENST00000553830 LMBR1LQ6UX01 489 aa17.61■□□□□ 0.41
PRKCH-206ENST00000553830 TPTE2Q6XPS3 522 aa17.61■□□□□ 0.41
PRKCH-206ENST00000553830 RPAP2Q8IXW5 612 aaPredicted RBP17.61■□□□□ 0.41
PRKCH-206ENST00000553830 PARP3Q9Y6F1 533 aa17.61■□□□□ 0.41
PRKCH-206ENST00000553830 BCL11AQ9H165 835 aa17.6■□□□□ 0.41
PRKCH-206ENST00000553830 TAF1P21675 1872 aa17.6■□□□□ 0.41
PRKCH-206ENST00000553830 PDE8AO60658 829 aa17.59■□□□□ 0.41
PRKCH-206ENST00000553830 HMMRO75330 724 aa17.59■□□□□ 0.41
PRKCH-206ENST00000553830 CTSWP56202 376 aa17.59■□□□□ 0.41
PRKCH-206ENST00000553830 ST5P78524 1137 aa17.59■□□□□ 0.41
PRKCH-206ENST00000553830 PRR5LQ6MZQ0 368 aa17.59■□□□□ 0.41
PRKCH-206ENST00000553830 ATF5Q9Y2D1 282 aaPredicted RBP17.59■□□□□ 0.41
PRKCH-206ENST00000553830 ANKRD31Q8N7Z5 1873 aa17.58■□□□□ 0.41
PRKCH-206ENST00000553830 NRXN2Q9P2S2 1712 aa17.58■□□□□ 0.41
PRKCH-206ENST00000553830 APBB1O00213 710 aa17.58■□□□□ 0.4
PRKCH-206ENST00000553830 FAM161AQ3B820 660 aa17.58■□□□□ 0.4
PRKCH-206ENST00000553830 PLA2G12BQ9BX93 195 aa17.58■□□□□ 0.4
PRKCH-206ENST00000553830 HDAC1Q13547 482 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms