RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SPTY2D1Q68D10 685 aaPredicted RBP10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 INTS3Q68E01 1043 aaKnown RBP10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 PABPN1Q86U42 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 CNNM3Q8NE01 707 aa10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 GAS2L2Q8NHY3 880 aa10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 CEP89Q96ST8 783 aa10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 SPINK5Q9NQ38 1064 aaPredicted RBP10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 PPFIA3O75145 1194 aa10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 VPS41P49754 854 aa10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 CAPRIN2Q6IMN6 1127 aaKnown RBP10.34□□□□□ -0.75
GTF2A1-203ENST00000553612 ZC3H6P61129 1189 aaKnown RBP10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 UPF3BQ9BZI7 483 aaKnown RBP10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 ANKRD7Q92527 254 aa10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 ERBB3P21860 1342 aa10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 HNRNPH1P31943 449 aaKnown RBP10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 TSR1Q2NL82 804 aaKnown RBP10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 GKAP1Q5VSY0 366 aaPredicted RBP10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 TBC1D22AQ8WUA7 517 aa10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 FAM167BQ9BTA0 163 aa10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 CCAR1Q8IX12 1150 aaKnown RBP10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 NECTIN2Q92692 538 aa10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 ZCWPW1Q9H0M4 648 aa10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 NUP62CLQ9H1M0 184 aa10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 VPS8Q8N3P4 1428 aa10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 CPLX2Q6PUV4 134 aaKnown RBP10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 ABCF2Q9UG63 623 aa10.33□□□□□ -0.76
GTF2A1-203ENST00000553612 LSM1O15116 133 aaKnown RBP10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 FBLN2P98095 1184 aa10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 CCDC73Q6ZRK6 1079 aa10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 TMEM63CQ9P1W3 806 aa10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 HNRNPCP07910 306 aaKnown RBP eCLIP10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 GNG11P61952 73 aa10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 SIX5Q8N196 739 aa10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 MIEF2Q96C03 454 aa10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 ZNF396Q96N95 335 aaPredicted RBP10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 ZNF711Q9Y462 761 aa10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 ABCC8Q09428 1581 aa10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 SMIM23A6NLE4 172 aa10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 BAG1Q99933 345 aaPredicted RBP10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 ANTXR1Q9H6X2 564 aa10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 FAN1Q9Y2M0 1017 aa10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 SFPQP23246 707 aaKnown RBP eCLIP10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 SF3B2Q13435 895 aaKnown RBP10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 SPECC1Q5M775 1068 aa10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 BSDC1Q9NW68 430 aaPredicted RBP10.32□□□□□ -0.76
GTF2A1-203ENST00000553612 PYGLP06737 847 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 ZNF365Q70YC5 407 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 MSL3Q8N5Y2 521 aaKnown RBP10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 ADAM21Q9UKJ8 722 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 TRIM21P19474 475 aaKnown RBP10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 SLC30A9Q6PML9 568 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 HDXQ7Z353 690 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 KIF5CO60282 957 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 TSPY2A6NKD2 308 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 SRGAP3O43295 1099 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 CLTAP09496 248 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 TSPY3P0CV98 308 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 TSPY8P0CW00 308 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 CCNHP51946 323 aaPredicted RBP10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 TSPY1Q01534 308 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 ZGPATQ8N5A5 531 aaKnown RBP10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 FAM76AQ8TAV0 307 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 CPLX3Q8WVH0 158 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 GDAP1L1Q96MZ0 367 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 PFDN4Q9NQP4 134 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 SERPINA10Q9UK55 444 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 GJA8P48165 433 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 C3orf20Q8ND61 904 aa10.31□□□□□ -0.76
GTF2A1-203ENST00000553612 HGSO14964 777 aaPredicted RBP10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 ERC2O15083 957 aa10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 PPP2R3AQ06190 1150 aa10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 KIF4BQ2VIQ3 1234 aa10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 SNRNP27Q8WVK2 155 aaKnown RBP10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 TSR2Q969E8 191 aaKnown RBP10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 ADCY2Q08462 1091 aa10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 MAP3K11Q16584 847 aa10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 LRRD1A4D1F6 860 aa10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 SMARCA5O60264 1052 aaPredicted RBP10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 PKD2Q13563 968 aa10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 C17orf50Q8WW18 174 aa10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 CHUKO15111 745 aa10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 NBPF7P0C2Y1 421 aaPredicted RBP10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 SCRN1Q12765 414 aa10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 PAIP2BQ9ULR5 123 aaKnown RBP10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 CNPY2Q9Y2B0 182 aa10.3□□□□□ -0.76
GTF2A1-203ENST00000553612 PPFIA2O75334 1257 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 MATR3P43243 847 aaKnown RBP eCLIP10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 TMCO4Q5TGY1 634 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 APBB1IPQ7Z5R6 666 aaPredicted RBP10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 BCAS4Q8TDM0 211 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 CCDC12Q8WUD4 166 aaPredicted RBP10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 USP6NLQ92738 828 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 BIN1O00499 593 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 NEMFO60524 1076 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 CCDC96Q2M329 555 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 FBXO9Q9UK97 447 aaPredicted RBP10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 MTMR7Q9Y216 660 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 FOXD4Q12950 439 aaPredicted RBP10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 PHC3Q8NDX5 983 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms