RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 EPHA10Q5JZY3 1008 aa21.86■■□□□ 1.09
PSEN1-206ENST00000553447 MYH3P11055 1940 aa21.86■■□□□ 1.09
PSEN1-206ENST00000553447 RGL2O15211 777 aa21.85■■□□□ 1.09
PSEN1-206ENST00000553447 PCCAP05165 728 aaPredicted RBP21.85■■□□□ 1.09
PSEN1-206ENST00000553447 RABL6Q3YEC7 729 aaPredicted RBP21.85■■□□□ 1.09
PSEN1-206ENST00000553447 EXOC6BQ9Y2D4 811 aa21.85■■□□□ 1.09
PSEN1-206ENST00000553447 RTCBQ9Y3I0 505 aaKnown RBP21.85■■□□□ 1.09
PSEN1-206ENST00000553447 PLSCR1O15162 318 aa21.84■■□□□ 1.09
PSEN1-206ENST00000553447 ZBTB38Q8NAP3 1195 aaPredicted RBP21.84■■□□□ 1.09
PSEN1-206ENST00000553447 AK7Q96M32 723 aa21.84■■□□□ 1.09
PSEN1-206ENST00000553447 ZNF652Q9Y2D9 606 aa21.84■■□□□ 1.09
PSEN1-206ENST00000553447 UBN2Q6ZU65 1347 aa21.83■■□□□ 1.09
PSEN1-206ENST00000553447 APBA3O96018 575 aa21.83■■□□□ 1.09
PSEN1-206ENST00000553447 TXNRD1Q16881 649 aa21.83■■□□□ 1.09
PSEN1-206ENST00000553447 CLEC4GQ6UXB4 293 aa21.83■■□□□ 1.09
PSEN1-206ENST00000553447 ZBTB47Q9UFB7 747 aaPredicted RBP21.83■■□□□ 1.09
PSEN1-206ENST00000553447 CDHR2Q9BYE9 1310 aa21.82■■□□□ 1.08
PSEN1-206ENST00000553447 LAMB2P55268 1798 aa21.82■■□□□ 1.08
PSEN1-206ENST00000553447 SURF6O75683 361 aaKnown RBP21.82■■□□□ 1.08
PSEN1-206ENST00000553447 HMGB2P26583 209 aaKnown RBP21.82■■□□□ 1.08
PSEN1-206ENST00000553447 FOXO4P98177 505 aa21.82■■□□□ 1.08
PSEN1-206ENST00000553447 RTL5Q5HYW3 569 aaPredicted RBP21.82■■□□□ 1.08
PSEN1-206ENST00000553447 NARFQ9UHQ1 456 aa21.82■■□□□ 1.08
PSEN1-206ENST00000553447 APBB1O00213 710 aa21.81■■□□□ 1.08
PSEN1-206ENST00000553447 RAB11FIP3O75154 756 aa21.81■■□□□ 1.08
PSEN1-206ENST00000553447 SMIM5Q71RC9 77 aa21.81■■□□□ 1.08
PSEN1-206ENST00000553447 PROM2Q8N271 834 aa21.81■■□□□ 1.08
PSEN1-206ENST00000553447 NOP58Q9Y2X3 529 aaKnown RBP21.81■■□□□ 1.08
PSEN1-206ENST00000553447 COL24A1Q17RW2 1714 aa21.8■■□□□ 1.08
PSEN1-206ENST00000553447 PARP10Q53GL7 1025 aa21.8■■□□□ 1.08
PSEN1-206ENST00000553447 AMIGO3Q86WK7 504 aa21.8■■□□□ 1.08
PSEN1-206ENST00000553447 FAM89AQ96GI7 184 aa21.8■■□□□ 1.08
PSEN1-206ENST00000553447 PLA2G12BQ9BX93 195 aa21.8■■□□□ 1.08
PSEN1-206ENST00000553447 SMARCA5O60264 1052 aaPredicted RBP21.79■■□□□ 1.08
PSEN1-206ENST00000553447 HSP90AB4PQ58FF6 505 aa21.79■■□□□ 1.08
PSEN1-206ENST00000553447 LMBR1LQ6UX01 489 aa21.79■■□□□ 1.08
PSEN1-206ENST00000553447 LRRCC1Q9C099 1032 aa21.79■■□□□ 1.08
PSEN1-206ENST00000553447 BCL2L12Q9HB09 334 aa21.79■■□□□ 1.08
PSEN1-206ENST00000553447 TRMT112Q9UI30 125 aaKnown RBP21.79■■□□□ 1.08
PSEN1-206ENST00000553447 NIP7Q9Y221 180 aaKnown RBP eCLIP21.79■■□□□ 1.08
PSEN1-206ENST00000553447 DDX60Q8IY21 1712 aaKnown RBP21.79■■□□□ 1.08
PSEN1-206ENST00000553447 TUBGCP6Q96RT7 1819 aa21.78■■□□□ 1.08
PSEN1-206ENST00000553447 ADRA2BP18089 450 aa21.78■■□□□ 1.08
PSEN1-206ENST00000553447 TRAPPC3LQ5T215 181 aa21.78■■□□□ 1.08
PSEN1-206ENST00000553447 SUSD4Q5VX71 490 aa21.78■■□□□ 1.08
PSEN1-206ENST00000553447 USPL1Q5W0Q7 1092 aa21.78■■□□□ 1.08
PSEN1-206ENST00000553447 ARHGEF1Q92888 912 aaKnown RBP21.78■■□□□ 1.08
PSEN1-206ENST00000553447 ZPR1O75312 459 aa21.77■■□□□ 1.08
PSEN1-206ENST00000553447 RFX5P48382 616 aaPredicted RBP21.77■■□□□ 1.08
PSEN1-206ENST00000553447 SRP68Q9UHB9 627 aaKnown RBP21.77■■□□□ 1.08
PSEN1-206ENST00000553447 PA2G4Q9UQ80 394 aaKnown RBP21.77■■□□□ 1.08
PSEN1-206ENST00000553447 USP42Q9H9J4 1324 aaKnown RBP21.77■■□□□ 1.07
PSEN1-206ENST00000553447 PHF14O94880 888 aa21.76■■□□□ 1.07
PSEN1-206ENST00000553447 UTP14AQ9BVJ6 771 aaKnown RBP21.76■■□□□ 1.07
PSEN1-206ENST00000553447 COPRSQ9NQ92 184 aa21.76■■□□□ 1.07
PSEN1-206ENST00000553447 CASZ1Q86V15 1759 aa21.76■■□□□ 1.07
PSEN1-206ENST00000553447 RFC4P35249 363 aa21.75■■□□□ 1.07
PSEN1-206ENST00000553447 ERC1Q8IUD2 1116 aa21.75■■□□□ 1.07
PSEN1-206ENST00000553447 C16orf71Q8IYS4 520 aaPredicted RBP21.75■■□□□ 1.07
PSEN1-206ENST00000553447 SYNE4Q8N205 404 aa21.75■■□□□ 1.07
PSEN1-206ENST00000553447 RHPN1Q8TCX5 695 aa21.75■■□□□ 1.07
PSEN1-206ENST00000553447 KIF1BPQ96EK5 621 aa21.75■■□□□ 1.07
PSEN1-206ENST00000553447 TSHZ2Q9NRE2 1034 aa21.75■■□□□ 1.07
PSEN1-206ENST00000553447 CHMP3Q9Y3E7 222 aa21.75■■□□□ 1.07
PSEN1-206ENST00000553447 SH3TC1Q8TE82 1336 aa21.75■■□□□ 1.07
PSEN1-206ENST00000553447 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.74■■□□□ 1.07
PSEN1-206ENST00000553447 IRS4O14654 1257 aaPredicted RBP21.74■■□□□ 1.07
PSEN1-206ENST00000553447 NTSR2O95665 410 aa21.74■■□□□ 1.07
PSEN1-206ENST00000553447 SSFA2P28290 1259 aa21.74■■□□□ 1.07
PSEN1-206ENST00000553447 OS9Q13438 667 aaPredicted RBP21.74■■□□□ 1.07
PSEN1-206ENST00000553447 CSF1RP07333 972 aa21.73■■□□□ 1.07
PSEN1-206ENST00000553447 PTPN12Q05209 780 aaKnown RBP21.73■■□□□ 1.07
PSEN1-206ENST00000553447 G3BP1Q13283 466 aaKnown RBP eCLIP21.73■■□□□ 1.07
PSEN1-206ENST00000553447 TBC1D9BQ66K14 1250 aa21.73■■□□□ 1.07
PSEN1-206ENST00000553447 ILDR1Q86SU0 546 aaPredicted RBP21.73■■□□□ 1.07
PSEN1-206ENST00000553447 PLEKHM2Q8IWE5 1019 aa21.73■■□□□ 1.07
PSEN1-206ENST00000553447 KLHDC4Q8TBB5 520 aa21.73■■□□□ 1.07
PSEN1-206ENST00000553447 EP400Q96L91 3159 aa21.73■■□□□ 1.07
PSEN1-206ENST00000553447 FAM177BA6PVY3 158 aa21.72■■□□□ 1.07
PSEN1-206ENST00000553447 PDE8AO60658 829 aa21.72■■□□□ 1.07
PSEN1-206ENST00000553447 OTUD7AQ8TE49 926 aaPredicted RBP21.72■■□□□ 1.07
PSEN1-206ENST00000553447 CTSWP56202 376 aa21.71■■□□□ 1.07
PSEN1-206ENST00000553447 AKT1S1Q96B36 256 aa21.71■■□□□ 1.07
PSEN1-206ENST00000553447 BCL11AQ9H165 835 aa21.71■■□□□ 1.07
PSEN1-206ENST00000553447 IL1RAPL2Q9NP60 686 aa21.71■■□□□ 1.07
PSEN1-206ENST00000553447 FAM161AQ3B820 660 aa21.7■■□□□ 1.06
PSEN1-206ENST00000553447 SIL1Q9H173 461 aa21.7■■□□□ 1.06
PSEN1-206ENST00000553447 SALL3Q9BXA9 1300 aa21.7■■□□□ 1.06
PSEN1-206ENST00000553447 SASH1O94885 1247 aa21.69■■□□□ 1.06
PSEN1-206ENST00000553447 HSP90B1P14625 803 aaKnown RBP21.69■■□□□ 1.06
PSEN1-206ENST00000553447 ZNF827Q17R98 1081 aa21.69■■□□□ 1.06
PSEN1-206ENST00000553447 BICDL1Q6ZP65 573 aa21.69■■□□□ 1.06
PSEN1-206ENST00000553447 TTLL11Q8NHH1 800 aa21.69■■□□□ 1.06
PSEN1-206ENST00000553447 SETDB2Q96T68 719 aa21.69■■□□□ 1.06
PSEN1-206ENST00000553447 CCDC57Q2TAC2 916 aa21.68■■□□□ 1.06
PSEN1-206ENST00000553447 BACH2Q9BYV9 841 aa21.68■■□□□ 1.06
PSEN1-206ENST00000553447 QSER1Q2KHR3 1735 aa21.67■■□□□ 1.06
PSEN1-206ENST00000553447 HCLS1P14317 486 aaPredicted RBP21.67■■□□□ 1.06
PSEN1-206ENST00000553447 C8orf34Q49A92 452 aa21.67■■□□□ 1.06
PSEN1-206ENST00000553447 NUTM1Q86Y26 1132 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms