RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 STK3Q13188 491 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 CREB3L3Q68CJ9 461 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 UBE3BQ7Z3V4 1068 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 DNAJC2Q99543 621 aaKnown RBP11.03□□□□□ -0.64
UBE2N-205ENST00000550657 CCDC171Q6TFL3 1326 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 NPHP3Q7Z494 1330 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 PHKG2P15735 406 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 ATF3P18847 181 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 GCKRQ14397 625 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 FERMT3Q86UX7 667 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 TAF6LQ9Y6J9 622 aa11.03□□□□□ -0.64
UBE2N-205ENST00000550657 USP42Q9H9J4 1324 aaKnown RBP11.02□□□□□ -0.64
UBE2N-205ENST00000550657 DNM1Q05193 864 aaKnown RBP11.02□□□□□ -0.65
UBE2N-205ENST00000550657 ME3Q16798 604 aa11.02□□□□□ -0.65
UBE2N-205ENST00000550657 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.65
UBE2N-205ENST00000550657 RGPD2P0DJD1 1756 aa11.02□□□□□ -0.65
UBE2N-205ENST00000550657 F13A1P00488 732 aa11.02□□□□□ -0.65
UBE2N-205ENST00000550657 ZNF589Q86UQ0 364 aaPredicted RBP11.01□□□□□ -0.65
UBE2N-205ENST00000550657 MED1Q15648 1581 aaPredicted RBP11.01□□□□□ -0.65
UBE2N-205ENST00000550657 EPB41L2O43491 1005 aaKnown RBP11.01□□□□□ -0.65
UBE2N-205ENST00000550657 TFCP2Q12800 502 aa11.01□□□□□ -0.65
UBE2N-205ENST00000550657 FAM173BQ6P4H8 233 aa11.01□□□□□ -0.65
UBE2N-205ENST00000550657 C19orf44Q9H6X5 657 aa11.01□□□□□ -0.65
UBE2N-205ENST00000550657 TPCN1Q9ULQ1 816 aa11.01□□□□□ -0.65
UBE2N-205ENST00000550657 A0A087WZG4 1122 aa11.01□□□□□ -0.65
UBE2N-205ENST00000550657 SLC27A2O14975 620 aa11.01□□□□□ -0.65
UBE2N-205ENST00000550657 NECTIN1Q15223 517 aa11.01□□□□□ -0.65
UBE2N-205ENST00000550657 VPS53Q5VIR6 699 aa11.01□□□□□ -0.65
UBE2N-205ENST00000550657 CCDC129Q6ZRS4 1044 aa11.01□□□□□ -0.65
UBE2N-205ENST00000550657 IFNL2Q8IZJ0 200 aa11.01□□□□□ -0.65
UBE2N-205ENST00000550657 IL17RAQ96F46 866 aa11.01□□□□□ -0.65
UBE2N-205ENST00000550657 METTL22Q9BUU2 404 aaPredicted RBP11.01□□□□□ -0.65
UBE2N-205ENST00000550657 ZSWIM6Q9HCJ5 1215 aa11.01□□□□□ -0.65
UBE2N-205ENST00000550657 CABP4P57796 275 aa11□□□□□ -0.65
UBE2N-205ENST00000550657 ZNF330Q9Y3S2 320 aaPredicted RBP11□□□□□ -0.65
UBE2N-205ENST00000550657 HEG1Q9ULI3 1381 aa11□□□□□ -0.65
UBE2N-205ENST00000550657 NCAPD2Q15021 1401 aa11□□□□□ -0.65
UBE2N-205ENST00000550657 PHF14O94880 888 aa11□□□□□ -0.65
UBE2N-205ENST00000550657 SNRPA1P09661 255 aaKnown RBP11□□□□□ -0.65
UBE2N-205ENST00000550657 CYP27B1O15528 508 aa10.99□□□□□ -0.65
UBE2N-205ENST00000550657 HCLS1P14317 486 aaPredicted RBP10.99□□□□□ -0.65
UBE2N-205ENST00000550657 ST3GAL1Q11201 340 aa10.99□□□□□ -0.65
UBE2N-205ENST00000550657 LARP1BQ659C4 914 aaKnown RBP10.99□□□□□ -0.65
UBE2N-205ENST00000550657 GIMAP6Q6P9H5 292 aa10.99□□□□□ -0.65
UBE2N-205ENST00000550657 BLOC1S2Q6QNY1 142 aa10.99□□□□□ -0.65
UBE2N-205ENST00000550657 DDX46Q7L014 1031 aaKnown RBP10.99□□□□□ -0.65
UBE2N-205ENST00000550657 MAP4K1Q92918 833 aa10.99□□□□□ -0.65
UBE2N-205ENST00000550657 NEUROD6Q96NK8 337 aa10.99□□□□□ -0.65
UBE2N-205ENST00000550657 SEC62Q99442 399 aaKnown RBP10.99□□□□□ -0.65
UBE2N-205ENST00000550657 USP25Q9UHP3 1055 aa10.99□□□□□ -0.65
UBE2N-205ENST00000550657 DBNLQ9UJU6 430 aaKnown RBP10.99□□□□□ -0.65
UBE2N-205ENST00000550657 MTMR6Q9Y217 621 aa10.99□□□□□ -0.65
UBE2N-205ENST00000550657 KDM6AO15550 1401 aaPredicted RBP10.99□□□□□ -0.65
UBE2N-205ENST00000550657 C1orf167Q5SNV9 1468 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 HIP1O00291 1037 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 SLFNL1Q499Z3 407 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 CCDC183Q5T5S1 534 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 PDLIM2Q96JY6 352 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 DBNDD2Q9BQY9 259 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 ATP6V1DQ9Y5K8 247 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 FOSBP53539 338 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 RNF20Q5VTR2 975 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 ZSCAN31Q96LW9 406 aaPredicted RBP10.98□□□□□ -0.65
UBE2N-205ENST00000550657 FMNL2Q96PY5 1086 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 LRRC2Q9BYS8 371 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 R3HCC1Q9Y3T6 440 aaKnown RBP10.98□□□□□ -0.65
UBE2N-205ENST00000550657 PSMA5P28066 241 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 UBE2HP62256 183 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 TNNI3KQ59H18 835 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 LMBR1LQ6UX01 489 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 CDC37L1Q7L3B6 337 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 ZNF830Q96NB3 372 aaPredicted RBP10.98□□□□□ -0.65
UBE2N-205ENST00000550657 SH2B1Q9NRF2 756 aaPredicted RBP10.98□□□□□ -0.65
UBE2N-205ENST00000550657 FPGT-TNNI3KV9GXZ4 949 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 UTYO14607 1347 aa10.98□□□□□ -0.65
UBE2N-205ENST00000550657 PPFIA3O75145 1194 aa10.97□□□□□ -0.65
UBE2N-205ENST00000550657 HSP90B1P14625 803 aaKnown RBP10.97□□□□□ -0.65
UBE2N-205ENST00000550657 PTPN12Q05209 780 aaKnown RBP10.97□□□□□ -0.65
UBE2N-205ENST00000550657 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.97□□□□□ -0.65
UBE2N-205ENST00000550657 NOL7Q9UMY1 257 aaKnown RBP10.97□□□□□ -0.65
UBE2N-205ENST00000550657 KDM3BQ7LBC6 1761 aa10.97□□□□□ -0.65
UBE2N-205ENST00000550657 FGD1P98174 961 aa10.97□□□□□ -0.65
UBE2N-205ENST00000550657 DCAF5Q96JK2 942 aa10.97□□□□□ -0.65
UBE2N-205ENST00000550657 TM6SF1Q9BZW5 370 aa10.97□□□□□ -0.65
UBE2N-205ENST00000550657 TFIP11Q9UBB9 837 aaKnown RBP10.97□□□□□ -0.65
UBE2N-205ENST00000550657 MEGF6O75095 1541 aa10.97□□□□□ -0.65
UBE2N-205ENST00000550657 ZBTB3Q9H5J0 574 aa10.96□□□□□ -0.65
UBE2N-205ENST00000550657 CCDC39Q9UFE4 941 aa10.96□□□□□ -0.65
UBE2N-205ENST00000550657 NAP1L2Q9ULW6 460 aaPredicted RBP10.96□□□□□ -0.65
UBE2N-205ENST00000550657 CAMK4Q16566 473 aa10.96□□□□□ -0.66
UBE2N-205ENST00000550657 DDX11Q96FC9 970 aa10.96□□□□□ -0.66
UBE2N-205ENST00000550657 CCDC85AQ96PX6 553 aaPredicted RBP10.96□□□□□ -0.66
UBE2N-205ENST00000550657 TMEM94Q12767 1356 aa10.96□□□□□ -0.66
UBE2N-205ENST00000550657 RPS6KB1P23443 525 aa10.95□□□□□ -0.66
UBE2N-205ENST00000550657 TTLL7Q6ZT98 887 aa10.95□□□□□ -0.66
UBE2N-205ENST00000550657 ZKSCAN5Q9Y2L8 839 aa10.95□□□□□ -0.66
UBE2N-205ENST00000550657 TUBGCP6Q96RT7 1819 aa10.95□□□□□ -0.66
UBE2N-205ENST00000550657 CACNA1FO60840 1977 aa10.95□□□□□ -0.66
UBE2N-205ENST00000550657 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.95□□□□□ -0.66
UBE2N-205ENST00000550657 TAF5LO75529 589 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms