RNA–Protein interactions for RNA: ENST00000549993.1

AC138331.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC138331.1, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138331.1-201ENST00000549993 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
AC138331.1-201ENST00000549993 HIRAP54198 1017 aaPredicted RBP12.8□□□□□ -0.36
AC138331.1-201ENST00000549993 FMNL2Q96PY5 1086 aa12.8□□□□□ -0.36
AC138331.1-201ENST00000549993 HPS5Q9UPZ3 1129 aa12.8□□□□□ -0.36
AC138331.1-201ENST00000549993 ZNF652Q9Y2D9 606 aa12.8□□□□□ -0.36
AC138331.1-201ENST00000549993 KIF23Q02241 960 aaPredicted RBP12.79□□□□□ -0.36
AC138331.1-201ENST00000549993 CXCL9Q07325 125 aa12.79□□□□□ -0.36
AC138331.1-201ENST00000549993 RGMBQ6NW40 437 aa12.79□□□□□ -0.36
AC138331.1-201ENST00000549993 IL17REQ8NFR9 667 aa12.79□□□□□ -0.36
AC138331.1-201ENST00000549993 CCDC102AQ96A19 550 aa12.79□□□□□ -0.36
AC138331.1-201ENST00000549993 VPS33BQ9H267 617 aa12.79□□□□□ -0.36
AC138331.1-201ENST00000549993 ZNF408Q9H9D4 720 aa12.79□□□□□ -0.36
AC138331.1-201ENST00000549993 NIP7Q9Y221 180 aaKnown RBP eCLIP12.79□□□□□ -0.36
AC138331.1-201ENST00000549993 GMPSP49915 693 aaPredicted RBP12.78□□□□□ -0.36
AC138331.1-201ENST00000549993 MORC1Q86VD1 984 aa12.78□□□□□ -0.36
AC138331.1-201ENST00000549993 NIM1KQ8IY84 436 aa12.78□□□□□ -0.36
AC138331.1-201ENST00000549993 USP16Q9Y5T5 823 aa12.78□□□□□ -0.36
AC138331.1-201ENST00000549993 SZT2Q5T011 3432 aa12.78□□□□□ -0.36
AC138331.1-201ENST00000549993 SCN11AQ9UI33 1791 aa12.78□□□□□ -0.36
AC138331.1-201ENST00000549993 HMOX1P09601 288 aa12.77□□□□□ -0.37
AC138331.1-201ENST00000549993 TEFQ10587 303 aa12.77□□□□□ -0.37
AC138331.1-201ENST00000549993 PKN2Q16513 984 aaKnown RBP12.77□□□□□ -0.37
AC138331.1-201ENST00000549993 CSRNP1Q96S65 589 aa12.77□□□□□ -0.37
AC138331.1-201ENST00000549993 ZNRF3Q9ULT6 936 aa12.77□□□□□ -0.37
AC138331.1-201ENST00000549993 NPC1L1Q9UHC9 1359 aa12.77□□□□□ -0.37
AC138331.1-201ENST00000549993 SCN7AQ01118 1682 aa12.77□□□□□ -0.37
AC138331.1-201ENST00000549993 ARFGEF2Q9Y6D5 1785 aa12.76□□□□□ -0.37
AC138331.1-201ENST00000549993 USP48Q86UV5 1035 aa12.76□□□□□ -0.37
AC138331.1-201ENST00000549993 PANK3Q9H999 370 aa12.76□□□□□ -0.37
AC138331.1-201ENST00000549993 CDHR2Q9BYE9 1310 aa12.76□□□□□ -0.37
AC138331.1-201ENST00000549993 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
AC138331.1-201ENST00000549993 PPIP5K2O43314 1243 aa12.75□□□□□ -0.37
AC138331.1-201ENST00000549993 GTF2E1P29083 439 aaPredicted RBP12.75□□□□□ -0.37
AC138331.1-201ENST00000549993 PIP4K2AP48426 406 aaPredicted RBP12.75□□□□□ -0.37
AC138331.1-201ENST00000549993 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
AC138331.1-201ENST00000549993 DLK2Q6UY11 383 aa12.75□□□□□ -0.37
AC138331.1-201ENST00000549993 TRPM4Q8TD43 1214 aa12.75□□□□□ -0.37
AC138331.1-201ENST00000549993 CRAMP1Q96RY5 1269 aa12.75□□□□□ -0.37
AC138331.1-201ENST00000549993 KCNQ3O43525 872 aa12.74□□□□□ -0.37
AC138331.1-201ENST00000549993 FXR1P51114 621 aaKnown RBP eCLIP12.74□□□□□ -0.37
AC138331.1-201ENST00000549993 ZNF157P51786 506 aaPredicted RBP12.74□□□□□ -0.37
AC138331.1-201ENST00000549993 HLFQ16534 295 aa12.74□□□□□ -0.37
AC138331.1-201ENST00000549993 AOC3Q16853 763 aa12.74□□□□□ -0.37
AC138331.1-201ENST00000549993 SLC51AQ86UW1 340 aa12.74□□□□□ -0.37
AC138331.1-201ENST00000549993 NBPF26B4DH59 902 aa12.73□□□□□ -0.37
AC138331.1-201ENST00000549993 NBPF10Q6P3W6 841 aaKnown RBP12.73□□□□□ -0.37
AC138331.1-201ENST00000549993 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
AC138331.1-201ENST00000549993 C2orf69Q8N8R5 385 aa12.73□□□□□ -0.37
AC138331.1-201ENST00000549993 RTFDC1Q9BY42 306 aaPredicted RBP12.73□□□□□ -0.37
AC138331.1-201ENST00000549993 GBA2Q9HCG7 927 aaPredicted RBP12.73□□□□□ -0.37
AC138331.1-201ENST00000549993 CNOT7Q9UIV1 285 aaKnown RBP12.73□□□□□ -0.37
AC138331.1-201ENST00000549993 CACNA1SQ13698 1873 aa12.72□□□□□ -0.37
AC138331.1-201ENST00000549993 HTTP42858 3142 aa12.72□□□□□ -0.37
AC138331.1-201ENST00000549993 GNAT3A8MTJ3 354 aa12.72□□□□□ -0.37
AC138331.1-201ENST00000549993 SLC10A3P09131 477 aa12.72□□□□□ -0.37
AC138331.1-201ENST00000549993 TNIP1Q15025 636 aa12.72□□□□□ -0.37
AC138331.1-201ENST00000549993 RPGRQ92834 1020 aaKnown RBP12.72□□□□□ -0.37
AC138331.1-201ENST00000549993 RBM17Q96I25 401 aaKnown RBP12.72□□□□□ -0.37
AC138331.1-201ENST00000549993 NYXQ9GZU5 481 aa12.72□□□□□ -0.37
AC138331.1-201ENST00000549993 CUL9Q8IWT3 2517 aa12.71□□□□□ -0.37
AC138331.1-201ENST00000549993 UBR2Q8IWV8 1755 aa12.71□□□□□ -0.37
AC138331.1-201ENST00000549993 ABCC12Q96J65 1359 aa12.71□□□□□ -0.37
AC138331.1-201ENST00000549993 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.37
AC138331.1-201ENST00000549993 BTBD11A6QL63 1104 aa12.71□□□□□ -0.37
AC138331.1-201ENST00000549993 H7C1D1 291 aa12.71□□□□□ -0.37
AC138331.1-201ENST00000549993 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
AC138331.1-201ENST00000549993 SNRPA1P09661 255 aaKnown RBP12.71□□□□□ -0.37
AC138331.1-201ENST00000549993 NUTM1Q86Y26 1132 aa12.71□□□□□ -0.37
AC138331.1-201ENST00000549993 BCL2L13Q9BXK5 485 aa12.71□□□□□ -0.37
AC138331.1-201ENST00000549993 ATP6V0A2Q9Y487 856 aa12.71□□□□□ -0.37
AC138331.1-201ENST00000549993 TRPM7Q96QT4 1865 aa12.71□□□□□ -0.37
AC138331.1-201ENST00000549993 BCORQ6W2J9 1755 aa12.71□□□□□ -0.38
AC138331.1-201ENST00000549993 CEMIPQ8WUJ3 1361 aa12.7□□□□□ -0.38
AC138331.1-201ENST00000549993 SHTN1A0MZ66 631 aa12.7□□□□□ -0.38
AC138331.1-201ENST00000549993 KRT26Q7Z3Y9 468 aa12.7□□□□□ -0.38
AC138331.1-201ENST00000549993 SUPT20HQ8NEM7 779 aa12.7□□□□□ -0.38
AC138331.1-201ENST00000549993 POLR3GLQ9BT43 218 aa12.7□□□□□ -0.38
AC138331.1-201ENST00000549993 RANBP2P49792 3224 aaKnown RBP12.7□□□□□ -0.38
AC138331.1-201ENST00000549993 TCERG1O14776 1098 aaKnown RBP12.69□□□□□ -0.38
AC138331.1-201ENST00000549993 RAD17O75943 681 aa12.69□□□□□ -0.38
AC138331.1-201ENST00000549993 KIAA2012Q0VF49 1180 aa12.69□□□□□ -0.38
AC138331.1-201ENST00000549993 NOM1Q5C9Z4 860 aaKnown RBP12.69□□□□□ -0.38
AC138331.1-201ENST00000549993 FBXO46Q6PJ61 603 aaPredicted RBP12.69□□□□□ -0.38
AC138331.1-201ENST00000549993 GAS2L2Q8NHY3 880 aa12.69□□□□□ -0.38
AC138331.1-201ENST00000549993 ZNF296Q8WUU4 475 aaPredicted RBP12.69□□□□□ -0.38
AC138331.1-201ENST00000549993 DPF2Q92785 391 aa12.69□□□□□ -0.38
AC138331.1-201ENST00000549993 RIC1Q4ADV7 1423 aa12.69□□□□□ -0.38
AC138331.1-201ENST00000549993 ERVV-1B6SEH8 477 aa12.68□□□□□ -0.38
AC138331.1-201ENST00000549993 DIAPH1O60610 1272 aaKnown RBP12.68□□□□□ -0.38
AC138331.1-201ENST00000549993 C3orf67Q6ZVT6 689 aa12.68□□□□□ -0.38
AC138331.1-201ENST00000549993 MICALL2Q8IY33 904 aa12.68□□□□□ -0.38
AC138331.1-201ENST00000549993 TMX4Q9H1E5 349 aaPredicted RBP12.68□□□□□ -0.38
AC138331.1-201ENST00000549993 HDAC9Q9UKV0 1011 aa12.68□□□□□ -0.38
AC138331.1-201ENST00000549993 BRCA2P51587 3418 aa12.68□□□□□ -0.38
AC138331.1-201ENST00000549993 CENPFP49454 3210 aa12.67□□□□□ -0.38
AC138331.1-201ENST00000549993 YDJCA8MPS7 323 aa12.67□□□□□ -0.38
AC138331.1-201ENST00000549993 SAMD7Q7Z3H4 446 aa12.67□□□□□ -0.38
AC138331.1-201ENST00000549993 ADM5C9JUS6 153 aa12.66□□□□□ -0.38
AC138331.1-201ENST00000549993 EGFRP00533 1210 aa12.66□□□□□ -0.38
AC138331.1-201ENST00000549993 DPP8Q6V1X1 898 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms