RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 CNTNAP1P78357 1384 aa17.9■□□□□ 0.46
TROAP-211ENST00000549891 TMEM88BA6NKF7 163 aa17.89■□□□□ 0.45
TROAP-211ENST00000549891 HOXA10P31260 410 aaPredicted RBP17.89■□□□□ 0.45
TROAP-211ENST00000549891 TTLL7Q6ZT98 887 aa17.89■□□□□ 0.45
TROAP-211ENST00000549891 ZBTB3Q9H5J0 574 aa17.89■□□□□ 0.45
TROAP-211ENST00000549891 CAPN15O75808 1086 aa17.88■□□□□ 0.45
TROAP-211ENST00000549891 GPTP24298 496 aa17.88■□□□□ 0.45
TROAP-211ENST00000549891 EIF6P56537 245 aaKnown RBP17.88■□□□□ 0.45
TROAP-211ENST00000549891 GIGYF2Q6Y7W6 1299 aaKnown RBP17.88■□□□□ 0.45
TROAP-211ENST00000549891 PPP1R42Q7Z4L9 355 aa17.88■□□□□ 0.45
TROAP-211ENST00000549891 RBM17Q96I25 401 aaKnown RBP17.88■□□□□ 0.45
TROAP-211ENST00000549891 THUMPD2Q9BTF0 503 aaKnown RBP17.88■□□□□ 0.45
TROAP-211ENST00000549891 RNF123Q5XPI4 1314 aa17.88■□□□□ 0.45
TROAP-211ENST00000549891 SNED1Q8TER0 1413 aa17.88■□□□□ 0.45
TROAP-211ENST00000549891 ITGBL1O95965 494 aaPredicted RBP17.87■□□□□ 0.45
TROAP-211ENST00000549891 PARP10Q53GL7 1025 aa17.87■□□□□ 0.45
TROAP-211ENST00000549891 ZNF34Q8IZ26 560 aa17.87■□□□□ 0.45
TROAP-211ENST00000549891 CRAMP1Q96RY5 1269 aa17.87■□□□□ 0.45
TROAP-211ENST00000549891 TMX4Q9H1E5 349 aaPredicted RBP17.87■□□□□ 0.45
TROAP-211ENST00000549891 TSPYL4Q9UJ04 414 aa17.87■□□□□ 0.45
TROAP-211ENST00000549891 UBN2Q6ZU65 1347 aa17.87■□□□□ 0.45
TROAP-211ENST00000549891 LMOD1P29536 600 aaPredicted RBP17.86■□□□□ 0.45
TROAP-211ENST00000549891 SUSD4Q5VX71 490 aa17.86■□□□□ 0.45
TROAP-211ENST00000549891 PPEF1O14829 653 aaPredicted RBP17.85■□□□□ 0.45
TROAP-211ENST00000549891 ANKRD36CQ5JPF3 1778 aa17.85■□□□□ 0.45
TROAP-211ENST00000549891 CNTROBQ8N137 903 aa17.85■□□□□ 0.45
TROAP-211ENST00000549891 NLRP3Q96P20 1036 aa17.85■□□□□ 0.45
TROAP-211ENST00000549891 BABAM1Q9NWV8 329 aa17.85■□□□□ 0.45
TROAP-211ENST00000549891 NTSR2O95665 410 aa17.84■□□□□ 0.45
TROAP-211ENST00000549891 LMOD3Q0VAK6 560 aa17.84■□□□□ 0.45
TROAP-211ENST00000549891 LARGE2Q8N3Y3 721 aa17.84■□□□□ 0.45
TROAP-211ENST00000549891 AIDAQ96BJ3 306 aa17.84■□□□□ 0.45
TROAP-211ENST00000549891 GJA3Q9Y6H8 435 aa17.84■□□□□ 0.45
TROAP-211ENST00000549891 RIPK4P57078 832 aa17.83■□□□□ 0.44
TROAP-211ENST00000549891 MAP1SQ66K74 1059 aaPredicted RBP17.83■□□□□ 0.44
TROAP-211ENST00000549891 EIF2S2P20042 333 aaKnown RBP17.82■□□□□ 0.44
TROAP-211ENST00000549891 VEGFBP49765 207 aa17.82■□□□□ 0.44
TROAP-211ENST00000549891 NIM1KQ8IY84 436 aa17.82■□□□□ 0.44
TROAP-211ENST00000549891 UTP14AQ9BVJ6 771 aaKnown RBP17.82■□□□□ 0.44
TROAP-211ENST00000549891 VPS33BQ9H267 617 aa17.82■□□□□ 0.44
TROAP-211ENST00000549891 FOXN1O15353 648 aa17.81■□□□□ 0.44
TROAP-211ENST00000549891 RALBP1Q15311 655 aa17.81■□□□□ 0.44
TROAP-211ENST00000549891 DEFB115Q30KQ5 88 aa17.81■□□□□ 0.44
TROAP-211ENST00000549891 HSP90AB3PQ58FF7 597 aa17.81■□□□□ 0.44
TROAP-211ENST00000549891 PRDM10Q9NQV6 1147 aa17.81■□□□□ 0.44
TROAP-211ENST00000549891 TRPM7Q96QT4 1865 aa17.81■□□□□ 0.44
TROAP-211ENST00000549891 LAMB2P55268 1798 aa17.81■□□□□ 0.44
TROAP-211ENST00000549891 COL4A5P29400 1685 aa17.8■□□□□ 0.44
TROAP-211ENST00000549891 RASSF10A6NK89 507 aa17.8■□□□□ 0.44
TROAP-211ENST00000549891 TCERG1O14776 1098 aaKnown RBP17.8■□□□□ 0.44
TROAP-211ENST00000549891 CTCFP49711 727 aaPredicted RBP17.8■□□□□ 0.44
TROAP-211ENST00000549891 SLC10A5Q5PT55 438 aa17.8■□□□□ 0.44
TROAP-211ENST00000549891 LRP10Q7Z4F1 713 aa17.8■□□□□ 0.44
TROAP-211ENST00000549891 SUPT20HQ8NEM7 779 aa17.8■□□□□ 0.44
TROAP-211ENST00000549891 ATP6V0A2Q9Y487 856 aa17.8■□□□□ 0.44
TROAP-211ENST00000549891 LTBP1Q14766 1721 aa17.8■□□□□ 0.44
TROAP-211ENST00000549891 PPIP5K2O43314 1243 aa17.79■□□□□ 0.44
TROAP-211ENST00000549891 SCNN1DP51172 638 aa17.79■□□□□ 0.44
TROAP-211ENST00000549891 PDIA6Q15084 440 aa17.79■□□□□ 0.44
TROAP-211ENST00000549891 USP50Q70EL3 339 aaPredicted RBP17.79■□□□□ 0.44
TROAP-211ENST00000549891 DDX21Q9NR30 783 aaKnown RBP eCLIP17.79■□□□□ 0.44
TROAP-211ENST00000549891 ABT1Q9ULW3 272 aaKnown RBP17.79■□□□□ 0.44
TROAP-211ENST00000549891 TMPOP42166 694 aaKnown RBP17.78■□□□□ 0.44
TROAP-211ENST00000549891 C3orf67Q6ZVT6 689 aa17.78■□□□□ 0.44
TROAP-211ENST00000549891 ABCC4O15439 1325 aa17.77■□□□□ 0.44
TROAP-211ENST00000549891 BBOX1O75936 387 aa17.77■□□□□ 0.44
TROAP-211ENST00000549891 EPS15P42566 896 aa17.77■□□□□ 0.44
TROAP-211ENST00000549891 MAP2K1Q02750 393 aaPredicted RBP17.77■□□□□ 0.44
TROAP-211ENST00000549891 AOC3Q16853 763 aa17.77■□□□□ 0.44
TROAP-211ENST00000549891 WBP1LQ9NX94 342 aa17.77■□□□□ 0.44
TROAP-211ENST00000549891 WDR33Q9C0J8 1336 aaKnown RBP17.76■□□□□ 0.43
TROAP-211ENST00000549891 PROSER3Q2NL68 480 aa17.76■□□□□ 0.43
TROAP-211ENST00000549891 COPS6Q7L5N1 327 aa17.76■□□□□ 0.43
TROAP-211ENST00000549891 ANXA1P04083 346 aa17.75■□□□□ 0.43
TROAP-211ENST00000549891 AIMP1Q12904 312 aaKnown RBP17.75■□□□□ 0.43
TROAP-211ENST00000549891 DPP8Q6V1X1 898 aaPredicted RBP17.75■□□□□ 0.43
TROAP-211ENST00000549891 DDX46Q7L014 1031 aaKnown RBP17.75■□□□□ 0.43
TROAP-211ENST00000549891 NLRP10Q86W26 655 aa17.75■□□□□ 0.43
TROAP-211ENST00000549891 SP8Q8IXZ3 490 aa17.75■□□□□ 0.43
TROAP-211ENST00000549891 XAGE3Q8WTP9 111 aa17.75■□□□□ 0.43
TROAP-211ENST00000549891 RTFDC1Q9BY42 306 aaPredicted RBP17.75■□□□□ 0.43
TROAP-211ENST00000549891 ADARB2Q9NS39 739 aaKnown RBP17.75■□□□□ 0.43
TROAP-211ENST00000549891 ZNRF3Q9ULT6 936 aa17.75■□□□□ 0.43
TROAP-211ENST00000549891 SH3TC1Q8TE82 1336 aa17.74■□□□□ 0.43
TROAP-211ENST00000549891 ECE1P42892 770 aa17.74■□□□□ 0.43
TROAP-211ENST00000549891 TCIRG1Q13488 830 aa17.74■□□□□ 0.43
TROAP-211ENST00000549891 NECTIN2Q92692 538 aa17.74■□□□□ 0.43
TROAP-211ENST00000549891 GPRC5DQ9NZD1 345 aa17.74■□□□□ 0.43
TROAP-211ENST00000549891 TRMT112Q9UI30 125 aaKnown RBP17.74■□□□□ 0.43
TROAP-211ENST00000549891 TMC4Q7Z404 712 aa17.73■□□□□ 0.43
TROAP-211ENST00000549891 MPNDQ8N594 471 aa17.73■□□□□ 0.43
TROAP-211ENST00000549891 CDHR2Q9BYE9 1310 aa17.72■□□□□ 0.43
TROAP-211ENST00000549891 TAF1P21675 1872 aa17.72■□□□□ 0.43
TROAP-211ENST00000549891 HCLS1P14317 486 aaPredicted RBP17.72■□□□□ 0.43
TROAP-211ENST00000549891 LBX1P52954 281 aa17.72■□□□□ 0.43
TROAP-211ENST00000549891 CXCL9Q07325 125 aa17.72■□□□□ 0.43
TROAP-211ENST00000549891 KIAA2012Q0VF49 1180 aa17.72■□□□□ 0.43
TROAP-211ENST00000549891 GRAPQ13588 217 aa17.72■□□□□ 0.43
TROAP-211ENST00000549891 NEUROD2Q15784 382 aa17.72■□□□□ 0.43
TROAP-211ENST00000549891 PAXIP1Q6ZW49 1069 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms