RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 A1BGP04217 495 aa25.87■■□□□ 1.73
CTDSP2-204ENST00000548823 GOLGA2Q08379 1002 aa25.87■■□□□ 1.73
CTDSP2-204ENST00000548823 DZIP3Q86Y13 1208 aaKnown RBP25.87■■□□□ 1.73
CTDSP2-204ENST00000548823 CCDC146Q8IYE0 955 aa25.87■■□□□ 1.73
CTDSP2-204ENST00000548823 SYNE4Q8N205 404 aa25.87■■□□□ 1.73
CTDSP2-204ENST00000548823 TSKSQ9UJT2 592 aa25.87■■□□□ 1.73
CTDSP2-204ENST00000548823 CA12O43570 354 aa25.86■■□□□ 1.73
CTDSP2-204ENST00000548823 CLEC4GQ6UXB4 293 aa25.86■■□□□ 1.73
CTDSP2-204ENST00000548823 JDP2Q8WYK2 163 aa25.86■■□□□ 1.73
CTDSP2-204ENST00000548823 LMOD1P29536 600 aaPredicted RBP25.85■■□□□ 1.73
CTDSP2-204ENST00000548823 FMR1Q06787 632 aaKnown RBP eCLIP25.85■■□□□ 1.73
CTDSP2-204ENST00000548823 CST9Q5W186 159 aa25.85■■□□□ 1.73
CTDSP2-204ENST00000548823 CDCA7LQ96GN5 454 aa25.85■■□□□ 1.73
CTDSP2-204ENST00000548823 TLL2Q9Y6L7 1015 aa25.85■■□□□ 1.73
CTDSP2-204ENST00000548823 TNRC18O15417 2968 aaPredicted RBP25.85■■□□□ 1.73
CTDSP2-204ENST00000548823 TRMT2AQ8IZ69 625 aaKnown RBP25.84■■□□□ 1.73
CTDSP2-204ENST00000548823 LTBP1Q14766 1721 aa25.84■■□□□ 1.73
CTDSP2-204ENST00000548823 CASP8AP2Q9UKL3 1982 aa25.84■■□□□ 1.73
CTDSP2-204ENST00000548823 DIAPH1O60610 1272 aaKnown RBP25.83■■□□□ 1.73
CTDSP2-204ENST00000548823 ALDH1B1P30837 517 aa25.83■■□□□ 1.73
CTDSP2-204ENST00000548823 TEFQ10587 303 aa25.83■■□□□ 1.73
CTDSP2-204ENST00000548823 CCDC27Q2M243 656 aa25.83■■□□□ 1.73
CTDSP2-204ENST00000548823 PDE4DIPQ5VU43 2346 aa25.83■■□□□ 1.73
CTDSP2-204ENST00000548823 AOC2O75106 756 aa25.82■■□□□ 1.72
CTDSP2-204ENST00000548823 EIF6P56537 245 aaKnown RBP25.82■■□□□ 1.72
CTDSP2-204ENST00000548823 FMNL2Q96PY5 1086 aa25.82■■□□□ 1.72
CTDSP2-204ENST00000548823 PSMD1Q99460 953 aa25.82■■□□□ 1.72
CTDSP2-204ENST00000548823 PNNQ9H307 717 aaKnown RBP25.82■■□□□ 1.72
CTDSP2-204ENST00000548823 RCAN3Q9UKA8 241 aa25.82■■□□□ 1.72
CTDSP2-204ENST00000548823 GJA3Q9Y6H8 435 aa25.82■■□□□ 1.72
CTDSP2-204ENST00000548823 SLFN5Q08AF3 891 aa25.82■■□□□ 1.72
CTDSP2-204ENST00000548823 TPTE2Q6XPS3 522 aa25.82■■□□□ 1.72
CTDSP2-204ENST00000548823 U2AF1L5P0DN76 240 aaPredicted RBP25.81■■□□□ 1.72
CTDSP2-204ENST00000548823 U2AF1Q01081 240 aaKnown RBP eCLIP25.81■■□□□ 1.72
CTDSP2-204ENST00000548823 DUSP27Q5VZP5 1158 aa25.81■■□□□ 1.72
CTDSP2-204ENST00000548823 USP50Q70EL3 339 aaPredicted RBP25.81■■□□□ 1.72
CTDSP2-204ENST00000548823 ZNF652Q9Y2D9 606 aa25.81■■□□□ 1.72
CTDSP2-204ENST00000548823 TRAF5O00463 557 aa25.8■■□□□ 1.72
CTDSP2-204ENST00000548823 EPS15P42566 896 aa25.8■■□□□ 1.72
CTDSP2-204ENST00000548823 SCNN1DP51172 638 aa25.8■■□□□ 1.72
CTDSP2-204ENST00000548823 SIPA1L3O60292 1781 aaPredicted RBP25.79■■□□□ 1.72
CTDSP2-204ENST00000548823 IL17REQ8NFR9 667 aa25.79■■□□□ 1.72
CTDSP2-204ENST00000548823 SNED1Q8TER0 1413 aa25.79■■□□□ 1.72
CTDSP2-204ENST00000548823 E9PSI1 815 aa25.78■■□□□ 1.72
CTDSP2-204ENST00000548823 DGKZQ13574 1117 aa25.78■■□□□ 1.72
CTDSP2-204ENST00000548823 BRPF1P55201 1214 aaPredicted RBP25.77■■□□□ 1.72
CTDSP2-204ENST00000548823 SAPCD2Q86UD0 394 aa25.77■■□□□ 1.72
CTDSP2-204ENST00000548823 CC2D2BQ6DHV5 1058 aa25.76■■□□□ 1.71
CTDSP2-204ENST00000548823 WDR63Q8IWG1 891 aa25.76■■□□□ 1.71
CTDSP2-204ENST00000548823 WWC1Q8IX03 1113 aa25.76■■□□□ 1.71
CTDSP2-204ENST00000548823 HHIPL1Q96JK4 782 aa25.76■■□□□ 1.71
CTDSP2-204ENST00000548823 PLEKHF1Q96S99 279 aa25.76■■□□□ 1.71
CTDSP2-204ENST00000548823 PPP4R2Q9NY27 417 aa25.76■■□□□ 1.71
CTDSP2-204ENST00000548823 GNAT3A8MTJ3 354 aa25.75■■□□□ 1.71
CTDSP2-204ENST00000548823 NIP7Q9Y221 180 aaKnown RBP eCLIP25.75■■□□□ 1.71
CTDSP2-204ENST00000548823 COL4A5P29400 1685 aa25.75■■□□□ 1.71
CTDSP2-204ENST00000548823 RGL2O15211 777 aa25.74■■□□□ 1.71
CTDSP2-204ENST00000548823 USP16Q9Y5T5 823 aa25.74■■□□□ 1.71
CTDSP2-204ENST00000548823 RRP1P56182 461 aaKnown RBP25.73■■□□□ 1.71
CTDSP2-204ENST00000548823 U2SURPO15042 1029 aaKnown RBP25.72■■□□□ 1.71
CTDSP2-204ENST00000548823 PIP4K2AP48426 406 aaPredicted RBP25.72■■□□□ 1.71
CTDSP2-204ENST00000548823 CELF2O95319 508 aaKnown RBP25.71■■□□□ 1.71
CTDSP2-204ENST00000548823 IRX6P78412 446 aaPredicted RBP25.71■■□□□ 1.71
CTDSP2-204ENST00000548823 GRIPAP1Q4V328 841 aa25.71■■□□□ 1.71
CTDSP2-204ENST00000548823 LARGE2Q8N3Y3 721 aa25.71■■□□□ 1.71
CTDSP2-204ENST00000548823 GAS2L2Q8NHY3 880 aa25.71■■□□□ 1.71
CTDSP2-204ENST00000548823 FAM177BA6PVY3 158 aa25.7■■□□□ 1.71
CTDSP2-204ENST00000548823 CRY2Q49AN0 593 aa25.7■■□□□ 1.71
CTDSP2-204ENST00000548823 KCNQ3O43525 872 aa25.69■■□□□ 1.7
CTDSP2-204ENST00000548823 GTF2E1P29083 439 aaPredicted RBP25.69■■□□□ 1.7
CTDSP2-204ENST00000548823 ADARB2Q9NS39 739 aaKnown RBP25.69■■□□□ 1.7
CTDSP2-204ENST00000548823 BTBD11A6QL63 1104 aa25.69■■□□□ 1.7
CTDSP2-204ENST00000548823 CIAPIN1Q6FI81 312 aa25.69■■□□□ 1.7
CTDSP2-204ENST00000548823 CEMIPQ8WUJ3 1361 aa25.67■■□□□ 1.7
CTDSP2-204ENST00000548823 MAPK8IP3Q9UPT6 1336 aa25.67■■□□□ 1.7
CTDSP2-204ENST00000548823 GPRC5DQ9NZD1 345 aa25.67■■□□□ 1.7
CTDSP2-204ENST00000548823 TMPOP42166 694 aaKnown RBP25.66■■□□□ 1.7
CTDSP2-204ENST00000548823 NIM1KQ8IY84 436 aa25.66■■□□□ 1.7
CTDSP2-204ENST00000548823 RSPH6AQ9H0K4 717 aa25.66■■□□□ 1.7
CTDSP2-204ENST00000548823 PRAMEF22A3QJZ6 481 aa25.65■■□□□ 1.7
CTDSP2-204ENST00000548823 NOGQ13253 232 aa25.65■■□□□ 1.7
CTDSP2-204ENST00000548823 SNRPA1P09661 255 aaKnown RBP25.64■■□□□ 1.69
CTDSP2-204ENST00000548823 HOXA10P31260 410 aaPredicted RBP25.64■■□□□ 1.69
CTDSP2-204ENST00000548823 GLIS2Q9BZE0 524 aaPredicted RBP25.64■■□□□ 1.69
CTDSP2-204ENST00000548823 SPINK5Q9NQ38 1064 aaPredicted RBP25.64■■□□□ 1.69
CTDSP2-204ENST00000548823 PGAP2Q9UHJ9 254 aa25.64■■□□□ 1.69
CTDSP2-204ENST00000548823 PRPF38BQ5VTL8 546 aaKnown RBP25.63■■□□□ 1.69
CTDSP2-204ENST00000548823 RPGRQ92834 1020 aaKnown RBP25.63■■□□□ 1.69
CTDSP2-204ENST00000548823 NYXQ9GZU5 481 aa25.63■■□□□ 1.69
CTDSP2-204ENST00000548823 IL16Q14005 1332 aa25.63■■□□□ 1.69
CTDSP2-204ENST00000548823 NBPF26B4DH59 902 aa25.62■■□□□ 1.69
CTDSP2-204ENST00000548823 HLFQ16534 295 aa25.62■■□□□ 1.69
CTDSP2-204ENST00000548823 NBPF10Q6P3W6 841 aaKnown RBP25.62■■□□□ 1.69
CTDSP2-204ENST00000548823 NBPF15Q8N660 670 aa25.62■■□□□ 1.69
CTDSP2-204ENST00000548823 NEFMP07197 916 aa25.61■■□□□ 1.69
CTDSP2-204ENST00000548823 SOX10P56693 466 aa25.61■■□□□ 1.69
CTDSP2-204ENST00000548823 RRP7AQ9Y3A4 280 aaKnown RBP25.61■■□□□ 1.69
CTDSP2-204ENST00000548823 ABCC12Q96J65 1359 aa25.61■■□□□ 1.69
CTDSP2-204ENST00000548823 ZC3H15Q8WU90 426 aaKnown RBP25.6■■□□□ 1.69
CTDSP2-204ENST00000548823 VPS33BQ9H267 617 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms