RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 C1orf115Q9H7X2 142 aa36.13■■■■□ 3.37
BRF1-213ENST00000548421 BCL2L12Q9HB09 334 aa36.13■■■■□ 3.37
BRF1-213ENST00000548421 GNAI2P04899 355 aa36.12■■■■□ 3.37
BRF1-213ENST00000548421 SLC15A2Q16348 729 aa36.12■■■■□ 3.37
BRF1-213ENST00000548421 NLRP10Q86W26 655 aa36.12■■■■□ 3.37
BRF1-213ENST00000548421 HDAC5Q9UQL6 1122 aa36.11■■■■□ 3.37
BRF1-213ENST00000548421 PCDHB15Q9Y5E8 787 aa36.11■■■■□ 3.37
BRF1-213ENST00000548421 UBN2Q6ZU65 1347 aa36.1■■■■□ 3.37
BRF1-213ENST00000548421 NIP7Q9Y221 180 aaKnown RBP eCLIP36.1■■■■□ 3.37
BRF1-213ENST00000548421 PARP10Q53GL7 1025 aa36.09■■■■□ 3.37
BRF1-213ENST00000548421 CCDC136Q96JN2 1154 aa36.09■■■■□ 3.37
BRF1-213ENST00000548421 PNPLA7Q6ZV29 1317 aa36.08■■■■□ 3.37
BRF1-213ENST00000548421 COL24A1Q17RW2 1714 aa36.07■■■■□ 3.37
BRF1-213ENST00000548421 UBE3BQ7Z3V4 1068 aa36.07■■■■□ 3.37
BRF1-213ENST00000548421 COL23A1Q86Y22 540 aaPredicted RBP36.07■■■■□ 3.37
BRF1-213ENST00000548421 LRRFIP2Q9Y608 721 aaKnown RBP36.07■■■■□ 3.37
BRF1-213ENST00000548421 H7C1W4 665 aa36.06■■■■□ 3.36
BRF1-213ENST00000548421 TBC1D9BQ66K14 1250 aa36.05■■■■□ 3.36
BRF1-213ENST00000548421 GYS1P13807 737 aa36.05■■■■□ 3.36
BRF1-213ENST00000548421 B4GALNT3Q6L9W6 998 aa36.05■■■■□ 3.36
BRF1-213ENST00000548421 ZBTB38Q8NAP3 1195 aaPredicted RBP36.05■■■■□ 3.36
BRF1-213ENST00000548421 PCCAP05165 728 aaPredicted RBP36.04■■■■□ 3.36
BRF1-213ENST00000548421 CASP7P55210 303 aa36.04■■■■□ 3.36
BRF1-213ENST00000548421 MSH5O43196 834 aa36.02■■■■□ 3.36
BRF1-213ENST00000548421 PPP1R42Q7Z4L9 355 aa36.02■■■■□ 3.36
BRF1-213ENST00000548421 RPAP2Q8IXW5 612 aaPredicted RBP36.02■■■■□ 3.36
BRF1-213ENST00000548421 SUCLG2Q96I99 432 aa36.02■■■■□ 3.36
BRF1-213ENST00000548421 SETDB2Q96T68 719 aa36.02■■■■□ 3.36
BRF1-213ENST00000548421 SUSD4Q5VX71 490 aa36.01■■■■□ 3.36
BRF1-213ENST00000548421 CEP85Q6P2H3 762 aa36.01■■■■□ 3.36
BRF1-213ENST00000548421 BICDL1Q6ZP65 573 aa36.01■■■■□ 3.36
BRF1-213ENST00000548421 JARID2Q92833 1246 aaPredicted RBP36.01■■■■□ 3.36
BRF1-213ENST00000548421 TRMT112Q9UI30 125 aaKnown RBP36.01■■■■□ 3.36
BRF1-213ENST00000548421 ANKRD44Q8N8A2 993 aa36■■■■□ 3.35
BRF1-213ENST00000548421 UTP14AQ9BVJ6 771 aaKnown RBP36■■■■□ 3.35
BRF1-213ENST00000548421 RTL5Q5HYW3 569 aaPredicted RBP35.99■■■■□ 3.35
BRF1-213ENST00000548421 FAM89AQ96GI7 184 aa35.99■■■■□ 3.35
BRF1-213ENST00000548421 CDHR2Q9BYE9 1310 aa35.98■■■■□ 3.35
BRF1-213ENST00000548421 KAZALD1Q96I82 304 aa35.98■■■■□ 3.35
BRF1-213ENST00000548421 NTSR2O95665 410 aa35.97■■■■□ 3.35
BRF1-213ENST00000548421 HDAC1Q13547 482 aaPredicted RBP35.97■■■■□ 3.35
BRF1-213ENST00000548421 RWDD1Q9H446 243 aaPredicted RBP35.97■■■■□ 3.35
BRF1-213ENST00000548421 CARMIL3Q8ND23 1372 aa35.97■■■■□ 3.35
BRF1-213ENST00000548421 LAMB2P55268 1798 aa35.96■■■■□ 3.35
BRF1-213ENST00000548421 MYH3P11055 1940 aa35.96■■■■□ 3.35
BRF1-213ENST00000548421 NFIXQ14938 502 aa35.96■■■■□ 3.35
BRF1-213ENST00000548421 SIRT2Q8IXJ6 389 aa35.96■■■■□ 3.35
BRF1-213ENST00000548421 BICC1Q9H694 974 aaKnown RBP35.96■■■■□ 3.35
BRF1-213ENST00000548421 SH3TC1Q8TE82 1336 aa35.96■■■■□ 3.35
BRF1-213ENST00000548421 FAM177BA6PVY3 158 aa35.95■■■■□ 3.35
BRF1-213ENST00000548421 NYXQ9GZU5 481 aa35.94■■■■□ 3.34
BRF1-213ENST00000548421 ATP8B2P98198 1209 aa35.93■■■■□ 3.34
BRF1-213ENST00000548421 NLGN1Q8N2Q7 840 aa35.93■■■■□ 3.34
BRF1-213ENST00000548421 DDX60Q8IY21 1712 aaKnown RBP35.93■■■■□ 3.34
BRF1-213ENST00000548421 IGHDP01880 384 aa35.92■■■■□ 3.34
BRF1-213ENST00000548421 PLA2G12BQ9BX93 195 aa35.92■■■■□ 3.34
BRF1-213ENST00000548421 HMMRO75330 724 aa35.92■■■■□ 3.34
BRF1-213ENST00000548421 MTX1Q13505 466 aa35.92■■■■□ 3.34
BRF1-213ENST00000548421 EPHA10Q5JZY3 1008 aa35.92■■■■□ 3.34
BRF1-213ENST00000548421 SYNE4Q8N205 404 aa35.92■■■■□ 3.34
BRF1-213ENST00000548421 IRS4O14654 1257 aaPredicted RBP35.91■■■■□ 3.34
BRF1-213ENST00000548421 TM4SF1P30408 202 aa35.91■■■■□ 3.34
BRF1-213ENST00000548421 NBPF5PQ86XG9 351 aaPredicted RBP35.91■■■■□ 3.34
BRF1-213ENST00000548421 RABL6Q3YEC7 729 aaPredicted RBP35.9■■■■□ 3.34
BRF1-213ENST00000548421 KDM2BQ8NHM5 1336 aa35.89■■■■□ 3.34
BRF1-213ENST00000548421 FOXO4P98177 505 aa35.89■■■■□ 3.34
BRF1-213ENST00000548421 PNMA6EA0A0J9YXQ4 647 aa35.88■■■■□ 3.33
BRF1-213ENST00000548421 HSP90B1P14625 803 aaKnown RBP35.88■■■■□ 3.33
BRF1-213ENST00000548421 TPTE2Q6XPS3 522 aa35.88■■■■□ 3.33
BRF1-213ENST00000548421 CENPQQ7L2Z9 268 aaPredicted RBP35.88■■■■□ 3.33
BRF1-213ENST00000548421 NUTM1Q86Y26 1132 aa35.88■■■■□ 3.33
BRF1-213ENST00000548421 SRGAP3O43295 1099 aa35.87■■■■□ 3.33
BRF1-213ENST00000548421 GTF2E1P29083 439 aaPredicted RBP35.86■■■■□ 3.33
BRF1-213ENST00000548421 SSH3Q8TE77 659 aa35.86■■■■□ 3.33
BRF1-213ENST00000548421 PDE8AO60658 829 aa35.86■■■■□ 3.33
BRF1-213ENST00000548421 POLA2Q14181 598 aa35.85■■■■□ 3.33
BRF1-213ENST00000548421 ERFEQ4G0M1 354 aa35.85■■■■□ 3.33
BRF1-213ENST00000548421 CASZ1Q86V15 1759 aa35.85■■■■□ 3.33
BRF1-213ENST00000548421 DDR1Q08345 913 aa35.84■■■■□ 3.33
BRF1-213ENST00000548421 LMBR1LQ6UX01 489 aa35.84■■■■□ 3.33
BRF1-213ENST00000548421 POLRMTO00411 1230 aaKnown RBP35.83■■■■□ 3.33
BRF1-213ENST00000548421 NRXN2Q9P2S2 1712 aa35.82■■■■□ 3.33
BRF1-213ENST00000548421 NPHP1O15259 732 aa35.82■■■■□ 3.32
BRF1-213ENST00000548421 SERPINB2P05120 415 aa35.82■■■■□ 3.32
BRF1-213ENST00000548421 HCLS1P14317 486 aaPredicted RBP35.82■■■■□ 3.32
BRF1-213ENST00000548421 CTSWP56202 376 aa35.82■■■■□ 3.32
BRF1-213ENST00000548421 MSL1Q68DK7 614 aa35.82■■■■□ 3.32
BRF1-213ENST00000548421 CNBD1Q8NA66 436 aa35.82■■■■□ 3.32
BRF1-213ENST00000548421 ABCC12Q96J65 1359 aa35.81■■■■□ 3.32
BRF1-213ENST00000548421 SLC16A10Q8TF71 515 aa35.81■■■■□ 3.32
BRF1-213ENST00000548421 SLC10A5Q5PT55 438 aa35.8■■■■□ 3.32
BRF1-213ENST00000548421 PDGFDQ9GZP0 370 aaPredicted RBP35.8■■■■□ 3.32
BRF1-213ENST00000548421 CSF1RP07333 972 aa35.8■■■■□ 3.32
BRF1-213ENST00000548421 CHMP3Q9Y3E7 222 aa35.8■■■■□ 3.32
BRF1-213ENST00000548421 MMP10P09238 476 aa35.79■■■■□ 3.32
BRF1-213ENST00000548421 GCC1Q96CN9 775 aa35.79■■■■□ 3.32
BRF1-213ENST00000548421 DCTPP1Q9H773 170 aa35.79■■■■□ 3.32
BRF1-213ENST00000548421 PRR5LQ6MZQ0 368 aa35.78■■■■□ 3.32
BRF1-213ENST00000548421 SMC5Q8IY18 1101 aa35.78■■■■□ 3.32
BRF1-213ENST00000548421 TTLL11Q8NHH1 800 aa35.78■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms