RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 USP44Q9H0E7 712 aa20.53■□□□□ 0.88
HECTD4-206ENST00000548140 FAM177BA6PVY3 158 aa20.53■□□□□ 0.88
HECTD4-206ENST00000548140 GRM8O00222 908 aa20.53■□□□□ 0.88
HECTD4-206ENST00000548140 SETDB2Q96T68 719 aa20.53■□□□□ 0.88
HECTD4-206ENST00000548140 GNAI3P08754 354 aa20.52■□□□□ 0.87
HECTD4-206ENST00000548140 R3HDM1Q15032 1099 aaKnown RBP20.52■□□□□ 0.87
HECTD4-206ENST00000548140 NLGN1Q8N2Q7 840 aa20.52■□□□□ 0.87
HECTD4-206ENST00000548140 NBPF7P0C2Y1 421 aaPredicted RBP20.51■□□□□ 0.87
HECTD4-206ENST00000548140 NFIXQ14938 502 aa20.51■□□□□ 0.87
HECTD4-206ENST00000548140 SUSD4Q5VX71 490 aa20.51■□□□□ 0.87
HECTD4-206ENST00000548140 JARID2Q92833 1246 aaPredicted RBP20.51■□□□□ 0.87
HECTD4-206ENST00000548140 PDGFDQ9GZP0 370 aaPredicted RBP20.51■□□□□ 0.87
HECTD4-206ENST00000548140 TRMT112Q9UI30 125 aaKnown RBP20.51■□□□□ 0.87
HECTD4-206ENST00000548140 IBTKQ9P2D0 1353 aaPredicted RBP20.5■□□□□ 0.87
HECTD4-206ENST00000548140 UBTFL1P0CB47 393 aaPredicted RBP20.5■□□□□ 0.87
HECTD4-206ENST00000548140 RTL5Q5HYW3 569 aaPredicted RBP20.5■□□□□ 0.87
HECTD4-206ENST00000548140 MSL1Q68DK7 614 aa20.5■□□□□ 0.87
HECTD4-206ENST00000548140 PPP1R42Q7Z4L9 355 aa20.5■□□□□ 0.87
HECTD4-206ENST00000548140 ZBTB40Q9NUA8 1239 aa20.5■□□□□ 0.87
HECTD4-206ENST00000548140 UBE3BQ7Z3V4 1068 aa20.49■□□□□ 0.87
HECTD4-206ENST00000548140 UTP14AQ9BVJ6 771 aaKnown RBP20.49■□□□□ 0.87
HECTD4-206ENST00000548140 UTYO14607 1347 aa20.48■□□□□ 0.87
HECTD4-206ENST00000548140 H7C1W4 665 aa20.48■□□□□ 0.87
HECTD4-206ENST00000548140 PCCAP05165 728 aaPredicted RBP20.48■□□□□ 0.87
HECTD4-206ENST00000548140 TM4SF1P30408 202 aa20.48■□□□□ 0.87
HECTD4-206ENST00000548140 ZBTB38Q8NAP3 1195 aaPredicted RBP20.48■□□□□ 0.87
HECTD4-206ENST00000548140 FAM89AQ96GI7 184 aa20.48■□□□□ 0.87
HECTD4-206ENST00000548140 AAMPQ13685 434 aa20.47■□□□□ 0.87
HECTD4-206ENST00000548140 NBPF5PQ86XG9 351 aaPredicted RBP20.47■□□□□ 0.87
HECTD4-206ENST00000548140 SLC16A10Q8TF71 515 aa20.47■□□□□ 0.87
HECTD4-206ENST00000548140 C1orf115Q9H7X2 142 aa20.47■□□□□ 0.87
HECTD4-206ENST00000548140 CARMIL3Q8ND23 1372 aa20.47■□□□□ 0.87
HECTD4-206ENST00000548140 PSDA5PKW4 1024 aaPredicted RBP20.46■□□□□ 0.87
HECTD4-206ENST00000548140 NTSR2O95665 410 aa20.46■□□□□ 0.87
HECTD4-206ENST00000548140 GNAI2P04899 355 aa20.46■□□□□ 0.87
HECTD4-206ENST00000548140 NYXQ9GZU5 481 aa20.46■□□□□ 0.87
HECTD4-206ENST00000548140 HDAC5Q9UQL6 1122 aa20.46■□□□□ 0.87
HECTD4-206ENST00000548140 LRRFIP2Q9Y608 721 aaKnown RBP20.46■□□□□ 0.87
HECTD4-206ENST00000548140 NPHP1O15259 732 aa20.45■□□□□ 0.86
HECTD4-206ENST00000548140 GTF2E1P29083 439 aaPredicted RBP20.45■□□□□ 0.86
HECTD4-206ENST00000548140 CASP7P55210 303 aa20.45■□□□□ 0.86
HECTD4-206ENST00000548140 ERICH6BQ5W0A0 696 aa20.45■□□□□ 0.86
HECTD4-206ENST00000548140 SYNE4Q8N205 404 aa20.45■□□□□ 0.86
HECTD4-206ENST00000548140 SUCLG2Q96I99 432 aa20.45■□□□□ 0.86
HECTD4-206ENST00000548140 SERPINB2P05120 415 aa20.44■□□□□ 0.86
HECTD4-206ENST00000548140 DDR1Q08345 913 aa20.44■□□□□ 0.86
HECTD4-206ENST00000548140 TPTE2Q6XPS3 522 aa20.44■□□□□ 0.86
HECTD4-206ENST00000548140 NUTM1Q86Y26 1132 aa20.44■□□□□ 0.86
HECTD4-206ENST00000548140 SH3TC1Q8TE82 1336 aa20.44■□□□□ 0.86
HECTD4-206ENST00000548140 POLRMTO00411 1230 aaKnown RBP20.44■□□□□ 0.86
HECTD4-206ENST00000548140 MMP10P09238 476 aa20.44■□□□□ 0.86
HECTD4-206ENST00000548140 GTF3C3Q9Y5Q9 886 aa20.44■□□□□ 0.86
HECTD4-206ENST00000548140 PARP3Q9Y6F1 533 aa20.44■□□□□ 0.86
HECTD4-206ENST00000548140 CDHR2Q9BYE9 1310 aa20.43■□□□□ 0.86
HECTD4-206ENST00000548140 COL24A1Q17RW2 1714 aa20.43■□□□□ 0.86
HECTD4-206ENST00000548140 IRS4O14654 1257 aaPredicted RBP20.43■□□□□ 0.86
HECTD4-206ENST00000548140 ERFEQ4G0M1 354 aa20.43■□□□□ 0.86
HECTD4-206ENST00000548140 ZBTB7AO95365 584 aa20.42■□□□□ 0.86
HECTD4-206ENST00000548140 CNBD1Q8NA66 436 aa20.42■□□□□ 0.86
HECTD4-206ENST00000548140 CCDC24Q8N4L8 307 aa20.41■□□□□ 0.86
HECTD4-206ENST00000548140 KAZALD1Q96I82 304 aa20.41■□□□□ 0.86
HECTD4-206ENST00000548140 BICC1Q9H694 974 aaKnown RBP20.41■□□□□ 0.86
HECTD4-206ENST00000548140 PCDHB15Q9Y5E8 787 aa20.41■□□□□ 0.86
HECTD4-206ENST00000548140 HCLS1P14317 486 aaPredicted RBP20.4■□□□□ 0.86
HECTD4-206ENST00000548140 EPHA10Q5JZY3 1008 aa20.4■□□□□ 0.86
HECTD4-206ENST00000548140 PRR5LQ6MZQ0 368 aa20.4■□□□□ 0.86
HECTD4-206ENST00000548140 CASZ1Q86V15 1759 aa20.4■□□□□ 0.86
HECTD4-206ENST00000548140 PDE8AO60658 829 aa20.39■□□□□ 0.85
HECTD4-206ENST00000548140 HSP90B1P14625 803 aaKnown RBP20.39■□□□□ 0.85
HECTD4-206ENST00000548140 FOXO4P98177 505 aa20.39■□□□□ 0.85
HECTD4-206ENST00000548140 PLA2G12BQ9BX93 195 aa20.39■□□□□ 0.85
HECTD4-206ENST00000548140 MTFR1LQ9H019 292 aa20.39■□□□□ 0.85
HECTD4-206ENST00000548140 ATF5Q9Y2D1 282 aaPredicted RBP20.39■□□□□ 0.85
HECTD4-206ENST00000548140 ST5P78524 1137 aa20.38■□□□□ 0.85
HECTD4-206ENST00000548140 CEP85Q6P2H3 762 aa20.38■□□□□ 0.85
HECTD4-206ENST00000548140 RPAP2Q8IXW5 612 aaPredicted RBP20.38■□□□□ 0.85
HECTD4-206ENST00000548140 SLC10A5Q5PT55 438 aa20.37■□□□□ 0.85
HECTD4-206ENST00000548140 ANKRD44Q8N8A2 993 aa20.37■□□□□ 0.85
HECTD4-206ENST00000548140 PPP4R2Q9NY27 417 aa20.37■□□□□ 0.85
HECTD4-206ENST00000548140 ABCC12Q96J65 1359 aa20.37■□□□□ 0.85
HECTD4-206ENST00000548140 ATP8B2P98198 1209 aa20.36■□□□□ 0.85
HECTD4-206ENST00000548140 LMBR1LQ6UX01 489 aa20.36■□□□□ 0.85
HECTD4-206ENST00000548140 CHMP3Q9Y3E7 222 aa20.36■□□□□ 0.85
HECTD4-206ENST00000548140 CTSWP56202 376 aa20.36■□□□□ 0.85
HECTD4-206ENST00000548140 RABL6Q3YEC7 729 aaPredicted RBP20.36■□□□□ 0.85
HECTD4-206ENST00000548140 POLD1P28340 1107 aa20.35■□□□□ 0.85
HECTD4-206ENST00000548140 SIRT2Q8IXJ6 389 aa20.35■□□□□ 0.85
HECTD4-206ENST00000548140 NLRP3Q96P20 1036 aa20.35■□□□□ 0.85
HECTD4-206ENST00000548140 CCDC85AQ96PX6 553 aaPredicted RBP20.35■□□□□ 0.85
HECTD4-206ENST00000548140 PNMA6EA0A0J9YXQ4 647 aa20.34■□□□□ 0.85
HECTD4-206ENST00000548140 SRGAP3O43295 1099 aa20.34■□□□□ 0.85
HECTD4-206ENST00000548140 CSF1RP07333 972 aa20.34■□□□□ 0.85
HECTD4-206ENST00000548140 MTX1Q13505 466 aa20.34■□□□□ 0.85
HECTD4-206ENST00000548140 TTLL11Q8NHH1 800 aa20.34■□□□□ 0.85
HECTD4-206ENST00000548140 CCDC136Q96JN2 1154 aa20.34■□□□□ 0.85
HECTD4-206ENST00000548140 DDX60Q8IY21 1712 aaKnown RBP20.34■□□□□ 0.85
HECTD4-206ENST00000548140 NRXN2Q9P2S2 1712 aa20.33■□□□□ 0.84
HECTD4-206ENST00000548140 HMMRO75330 724 aa20.33■□□□□ 0.84
HECTD4-206ENST00000548140 C3orf67Q6ZVT6 689 aa20.33■□□□□ 0.84
HECTD4-206ENST00000548140 RWDD1Q9H446 243 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms