RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ADCY9O60503 1353 aa21.44■■□□□ 1.02
LTBR-215ENST00000546296 IBTKQ9P2D0 1353 aaPredicted RBP21.44■■□□□ 1.02
LTBR-215ENST00000546296 NRXN2Q9P2S2 1712 aa21.43■■□□□ 1.02
LTBR-215ENST00000546296 DNAAF4Q8WXU2 420 aa21.43■■□□□ 1.02
LTBR-215ENST00000546296 ZNF622Q969S3 477 aaKnown RBP eCLIP21.43■■□□□ 1.02
LTBR-215ENST00000546296 KCNA3P22001 575 aa21.42■■□□□ 1.02
LTBR-215ENST00000546296 RNF123Q5XPI4 1314 aa21.42■■□□□ 1.02
LTBR-215ENST00000546296 CCDC191Q8NCU4 936 aa21.42■■□□□ 1.02
LTBR-215ENST00000546296 SH3TC1Q8TE82 1336 aa21.42■■□□□ 1.02
LTBR-215ENST00000546296 YTHDC1Q96MU7 727 aaKnown RBP21.42■■□□□ 1.02
LTBR-215ENST00000546296 CWC25Q9NXE8 425 aaPredicted RBP21.42■■□□□ 1.02
LTBR-215ENST00000546296 BCS1LQ9Y276 419 aa21.41■■□□□ 1.02
LTBR-215ENST00000546296 F6X3S4 739 aa21.4■■□□□ 1.02
LTBR-215ENST00000546296 RARSP54136 660 aaKnown RBP21.4■■□□□ 1.02
LTBR-215ENST00000546296 DALRD3Q5D0E6 543 aaKnown RBP21.4■■□□□ 1.02
LTBR-215ENST00000546296 RTL5Q5HYW3 569 aaPredicted RBP21.4■■□□□ 1.02
LTBR-215ENST00000546296 FAM89AQ96GI7 184 aa21.4■■□□□ 1.02
LTBR-215ENST00000546296 NLRP3Q96P20 1036 aa21.4■■□□□ 1.02
LTBR-215ENST00000546296 KIF13BQ9NQT8 1826 aa21.4■■□□□ 1.02
LTBR-215ENST00000546296 ABCC12Q96J65 1359 aa21.39■■□□□ 1.02
LTBR-215ENST00000546296 IGKV5-2P06315 115 aa21.39■■□□□ 1.01
LTBR-215ENST00000546296 HCLS1P14317 486 aaPredicted RBP21.39■■□□□ 1.01
LTBR-215ENST00000546296 YBX3P16989 372 aaKnown RBP eCLIP21.39■■□□□ 1.016e-11■■□□□ 12.3
LTBR-215ENST00000546296 SLC10A5Q5PT55 438 aa21.39■■□□□ 1.01
LTBR-215ENST00000546296 SLC4A10Q6U841 1118 aa21.39■■□□□ 1.01
LTBR-215ENST00000546296 SYNE4Q8N205 404 aa21.39■■□□□ 1.01
LTBR-215ENST00000546296 PTPRCP08575 1304 aa21.38■■□□□ 1.01
LTBR-215ENST00000546296 GRIN3BO60391 1043 aa21.38■■□□□ 1.01
LTBR-215ENST00000546296 SRGNP10124 158 aa21.38■■□□□ 1.01
LTBR-215ENST00000546296 NPR1P16066 1061 aa21.38■■□□□ 1.01
LTBR-215ENST00000546296 CWF19L2Q2TBE0 894 aaKnown RBP21.38■■□□□ 1.01
LTBR-215ENST00000546296 TTLL6Q8N841 843 aa21.38■■□□□ 1.01
LTBR-215ENST00000546296 ZBTB38Q8NAP3 1195 aaPredicted RBP21.38■■□□□ 1.01
LTBR-215ENST00000546296 MASTLQ96GX5 879 aa21.38■■□□□ 1.01
LTBR-215ENST00000546296 ARFGEF2Q9Y6D5 1785 aa21.38■■□□□ 1.01
LTBR-215ENST00000546296 KLRG2A4D1S0 409 aaPredicted RBP21.37■■□□□ 1.01
LTBR-215ENST00000546296 NEURL1BA8MQ27 555 aa21.37■■□□□ 1.01
LTBR-215ENST00000546296 STYK1Q6J9G0 422 aa21.37■■□□□ 1.01
LTBR-215ENST00000546296 LINS1Q8NG48 757 aa21.37■■□□□ 1.01
LTBR-215ENST00000546296 RPGRQ92834 1020 aaKnown RBP21.37■■□□□ 1.01
LTBR-215ENST00000546296 N4BP2Q86UW6 1770 aaPredicted RBP21.37■■□□□ 1.01
LTBR-215ENST00000546296 HSP90B1P14625 803 aaKnown RBP21.36■■□□□ 1.01
LTBR-215ENST00000546296 JARID2Q92833 1246 aaPredicted RBP21.36■■□□□ 1.01
LTBR-215ENST00000546296 CNKSR1Q969H4 720 aa21.36■■□□□ 1.01
LTBR-215ENST00000546296 NOB1Q9ULX3 412 aaKnown RBP21.36■■□□□ 1.01
LTBR-215ENST00000546296 ANKRD36CQ5JPF3 1778 aa21.36■■□□□ 1.01
LTBR-215ENST00000546296 IRS4O14654 1257 aaPredicted RBP21.35■■□□□ 1.01
LTBR-215ENST00000546296 PCCAP05165 728 aaPredicted RBP21.35■■□□□ 1.01
LTBR-215ENST00000546296 CACNA1FO60840 1977 aa21.35■■□□□ 1.01
LTBR-215ENST00000546296 GCKRQ14397 625 aa21.34■■□□□ 1.01
LTBR-215ENST00000546296 BEND3Q5T5X7 828 aa21.34■■□□□ 1.01
LTBR-215ENST00000546296 C3orf67Q6ZVT6 689 aa21.34■■□□□ 1.01
LTBR-215ENST00000546296 KIAA1551Q9HCM1 1747 aa21.33■■□□□ 1.01
LTBR-215ENST00000546296 RIC1Q4ADV7 1423 aa21.33■■□□□ 1.01
LTBR-215ENST00000546296 ALDH1B1P30837 517 aa21.33■■□□□ 1.01
LTBR-215ENST00000546296 BRPF1P55201 1214 aaPredicted RBP21.33■■□□□ 1.01
LTBR-215ENST00000546296 CRY2Q49AN0 593 aa21.33■■□□□ 1.01
LTBR-215ENST00000546296 RBM17Q96I25 401 aaKnown RBP21.33■■□□□ 1.01
LTBR-215ENST00000546296 SRCIN1Q9C0H9 1055 aa21.33■■□□□ 1.01
LTBR-215ENST00000546296 ANKRD31Q8N7Z5 1873 aa21.32■■□□□ 1
LTBR-215ENST00000546296 BCAR3O75815 825 aa21.32■■□□□ 1
LTBR-215ENST00000546296 ARHGAP27Q6ZUM4 889 aa21.32■■□□□ 1
LTBR-215ENST00000546296 API5Q9BZZ5 524 aaKnown RBP21.32■■□□□ 1
LTBR-215ENST00000546296 ZNF219Q9P2Y4 722 aaPredicted RBP21.32■■□□□ 1
LTBR-215ENST00000546296 KIF16BQ96L93 1317 aa21.31■■□□□ 1
LTBR-215ENST00000546296 IPO8O15397 1037 aaKnown RBP21.31■■□□□ 1
LTBR-215ENST00000546296 PRPF40BQ6NWY9 871 aaKnown RBP21.31■■□□□ 1
LTBR-215ENST00000546296 FRAT1Q92837 279 aaPredicted RBP21.31■■□□□ 1
LTBR-215ENST00000546296 H7C1W4 665 aa21.3■■□□□ 1
LTBR-215ENST00000546296 ALDH1L1O75891 902 aa21.3■■□□□ 1
LTBR-215ENST00000546296 HOXA10P31260 410 aaPredicted RBP21.3■■□□□ 1
LTBR-215ENST00000546296 UBE3BQ7Z3V4 1068 aa21.3■■□□□ 1
LTBR-215ENST00000546296 C21orf2O43822 256 aa21.29■■□□□ 1
LTBR-215ENST00000546296 PDE8AO60658 829 aa21.29■■□□□ 1
LTBR-215ENST00000546296 DDX46Q7L014 1031 aaKnown RBP21.29■■□□□ 1
LTBR-215ENST00000546296 C9orf78Q9NZ63 289 aaPredicted RBP21.29■■□□□ 1
LTBR-215ENST00000546296 CDHR2Q9BYE9 1310 aa21.29■■□□□ 1
LTBR-215ENST00000546296 ARHGAP45Q92619 1136 aa21.28■■□□□ 1
LTBR-215ENST00000546296 CRAMP1Q96RY5 1269 aa21.28■■□□□ 1
LTBR-215ENST00000546296 SF3B3Q15393 1217 aaKnown RBP21.27■■□□□ 1
LTBR-215ENST00000546296 TNRC6CQ9HCJ0 1690 aaKnown RBP21.27■■□□□ 1
LTBR-215ENST00000546296 GRM8O00222 908 aa21.26■□□□□ 0.99
LTBR-215ENST00000546296 COL11A2P13942 1736 aaPredicted RBP21.26■□□□□ 0.99
LTBR-215ENST00000546296 CCT4P50991 539 aaKnown RBP21.25■□□□□ 0.99
LTBR-215ENST00000546296 CCDC152Q4G0S7 254 aa21.25■□□□□ 0.99
LTBR-215ENST00000546296 SOGA3Q5TF21 947 aa21.25■□□□□ 0.99
LTBR-215ENST00000546296 CCDC85AQ96PX6 553 aaPredicted RBP21.25■□□□□ 0.99
LTBR-215ENST00000546296 TMX4Q9H1E5 349 aaPredicted RBP21.25■□□□□ 0.99
LTBR-215ENST00000546296 GOLGB1Q14789 3259 aaKnown RBP21.24■□□□□ 0.99
LTBR-215ENST00000546296 ZKSCAN2Q63HK3 967 aa21.24■□□□□ 0.99
LTBR-215ENST00000546296 ABCC4O15439 1325 aa21.24■□□□□ 0.99
LTBR-215ENST00000546296 DLEC1Q9Y238 1755 aa21.23■□□□□ 0.99
LTBR-215ENST00000546296 PPEF1O14829 653 aaPredicted RBP21.23■□□□□ 0.99
LTBR-215ENST00000546296 BBOX1O75936 387 aa21.23■□□□□ 0.99
LTBR-215ENST00000546296 CASP7P55210 303 aa21.23■□□□□ 0.99
LTBR-215ENST00000546296 CTSWP56202 376 aa21.23■□□□□ 0.99
LTBR-215ENST00000546296 ATF7IPQ6VMQ6 1270 aa21.23■□□□□ 0.99
LTBR-215ENST00000546296 RCAN3Q9UKA8 241 aa21.23■□□□□ 0.99
LTBR-215ENST00000546296 BRCA1P38398 1863 aaKnown RBP21.22■□□□□ 0.99
LTBR-215ENST00000546296 GRAPQ13588 217 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms