RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 NPHP3Q7Z494 1330 aa16.83■□□□□ 0.28
SRP54-202ENST00000546080 NBPF7P0C2Y1 421 aaPredicted RBP16.82■□□□□ 0.28
SRP54-202ENST00000546080 CLASRPQ8N2M8 674 aaKnown RBP16.82■□□□□ 0.28
SRP54-202ENST00000546080 CLSTN2Q9H4D0 955 aa16.82■□□□□ 0.28
SRP54-202ENST00000546080 CLIP2Q9UDT6 1046 aa16.82■□□□□ 0.28
SRP54-202ENST00000546080 CHD2O14647 1828 aaKnown RBP16.82■□□□□ 0.28
SRP54-202ENST00000546080 CREB3L3Q68CJ9 461 aa16.82■□□□□ 0.28
SRP54-202ENST00000546080 BABAM1Q9NWV8 329 aa16.82■□□□□ 0.28
SRP54-202ENST00000546080 RBM8AQ9Y5S9 174 aaKnown RBP16.82■□□□□ 0.28
SRP54-202ENST00000546080 ROBO2Q9HCK4 1378 aa16.82■□□□□ 0.28
SRP54-202ENST00000546080 PSMA5P28066 241 aa16.81■□□□□ 0.28
SRP54-202ENST00000546080 RBM43Q6ZSC3 357 aaKnown RBP16.81■□□□□ 0.28
SRP54-202ENST00000546080 ECHDC1Q9NTX5 307 aa16.81■□□□□ 0.28
SRP54-202ENST00000546080 ZNF165P49910 485 aa16.81■□□□□ 0.28
SRP54-202ENST00000546080 GABPB1Q06547 395 aaPredicted RBP16.81■□□□□ 0.28
SRP54-202ENST00000546080 IL17REQ8NFR9 667 aa16.81■□□□□ 0.28
SRP54-202ENST00000546080 ADGRL3Q9HAR2 1447 aa16.81■□□□□ 0.28
SRP54-202ENST00000546080 A0A0U1RQG5 324 aaPredicted RBP16.8■□□□□ 0.28
SRP54-202ENST00000546080 ANKRD1Q15327 319 aa16.8■□□□□ 0.28
SRP54-202ENST00000546080 BICD2Q8TD16 824 aa16.8■□□□□ 0.28
SRP54-202ENST00000546080 LEO1Q8WVC0 666 aaPredicted RBP16.8■□□□□ 0.28
SRP54-202ENST00000546080 EVI5LQ96CN4 794 aa16.8■□□□□ 0.28
SRP54-202ENST00000546080 DNAJC25Q9H1X3 360 aa16.8■□□□□ 0.28
SRP54-202ENST00000546080 TFIP11Q9UBB9 837 aaKnown RBP16.8■□□□□ 0.28
SRP54-202ENST00000546080 DDX41Q9UJV9 622 aaKnown RBP16.8■□□□□ 0.28
SRP54-202ENST00000546080 IFIT2P09913 472 aaKnown RBP16.79■□□□□ 0.28
SRP54-202ENST00000546080 HDGFP51858 240 aaKnown RBP16.79■□□□□ 0.28
SRP54-202ENST00000546080 CEP135Q66GS9 1140 aa16.79■□□□□ 0.28
SRP54-202ENST00000546080 CACTINQ8WUQ7 758 aaKnown RBP16.79■□□□□ 0.28
SRP54-202ENST00000546080 CDC25BP30305 580 aa16.79■□□□□ 0.28
SRP54-202ENST00000546080 TAF3Q5VWG9 929 aa16.79■□□□□ 0.28
SRP54-202ENST00000546080 DNAAF4Q8WXU2 420 aa16.79■□□□□ 0.28
SRP54-202ENST00000546080 ZNF592Q92610 1267 aa16.79■□□□□ 0.28
SRP54-202ENST00000546080 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.79■□□□□ 0.28
SRP54-202ENST00000546080 NR1I2O75469 434 aa16.78■□□□□ 0.28
SRP54-202ENST00000546080 EIF2S2P20042 333 aaKnown RBP16.78■□□□□ 0.28
SRP54-202ENST00000546080 NAA30Q147X3 362 aaPredicted RBP16.78■□□□□ 0.28
SRP54-202ENST00000546080 BEND3Q5T5X7 828 aa16.78■□□□□ 0.28
SRP54-202ENST00000546080 BLOC1S2Q6QNY1 142 aa16.78■□□□□ 0.28
SRP54-202ENST00000546080 SLC27A2O14975 620 aa16.78■□□□□ 0.28
SRP54-202ENST00000546080 CCDC144BQ3MJ40 725 aa16.78■□□□□ 0.28
SRP54-202ENST00000546080 LARP1Q6PKG0 1096 aaKnown RBP16.78■□□□□ 0.28
SRP54-202ENST00000546080 CCDC144CPQ8IYA2 1237 aa16.78■□□□□ 0.28
SRP54-202ENST00000546080 MAP4K1Q92918 833 aa16.78■□□□□ 0.28
SRP54-202ENST00000546080 GOLGA6L19H0YKK7 550 aa16.77■□□□□ 0.28
SRP54-202ENST00000546080 HIP1O00291 1037 aa16.77■□□□□ 0.28
SRP54-202ENST00000546080 CAVIN2O95810 425 aa16.77■□□□□ 0.28
SRP54-202ENST00000546080 AGLP35573 1532 aa16.77■□□□□ 0.27
SRP54-202ENST00000546080 PI4KAP2A4QPH2 592 aa16.77■□□□□ 0.27
SRP54-202ENST00000546080 RNF20Q5VTR2 975 aa16.77■□□□□ 0.27
SRP54-202ENST00000546080 ERC1Q8IUD2 1116 aa16.77■□□□□ 0.27
SRP54-202ENST00000546080 PI4KAP1Q8N8J0 262 aa16.77■□□□□ 0.27
SRP54-202ENST00000546080 MORC2Q9Y6X9 1032 aaPredicted RBP16.77■□□□□ 0.27
SRP54-202ENST00000546080 NMIQ13287 307 aaPredicted RBP16.76■□□□□ 0.27
SRP54-202ENST00000546080 KIF18AQ8NI77 898 aa16.76■□□□□ 0.27
SRP54-202ENST00000546080 FAM227BQ96M60 508 aa16.76■□□□□ 0.27
SRP54-202ENST00000546080 NEMFO60524 1076 aa16.75■□□□□ 0.27
SRP54-202ENST00000546080 RPS6KB1P23443 525 aa16.75■□□□□ 0.27
SRP54-202ENST00000546080 LRRC8AQ8IWT6 810 aa16.75■□□□□ 0.27
SRP54-202ENST00000546080 PGBD1Q96JS3 809 aa16.75■□□□□ 0.27
SRP54-202ENST00000546080 TCEANC2Q96MN5 208 aa16.75■□□□□ 0.27
SRP54-202ENST00000546080 STK3Q13188 491 aa16.75■□□□□ 0.27
SRP54-202ENST00000546080 MLECQ14165 292 aa16.75■□□□□ 0.27
SRP54-202ENST00000546080 AACSQ86V21 672 aa16.75■□□□□ 0.27
SRP54-202ENST00000546080 ZNF397Q8NF99 534 aaPredicted RBP16.75■□□□□ 0.27
SRP54-202ENST00000546080 CHPF2Q9P2E5 772 aa16.75■□□□□ 0.27
SRP54-202ENST00000546080 MTX1Q13505 466 aa16.74■□□□□ 0.27
SRP54-202ENST00000546080 SARM1Q6SZW1 724 aa16.74■□□□□ 0.27
SRP54-202ENST00000546080 COL9A3Q14050 684 aaPredicted RBP16.74■□□□□ 0.27
SRP54-202ENST00000546080 TOB2Q14106 344 aaPredicted RBP16.74■□□□□ 0.27
SRP54-202ENST00000546080 PTPN14Q15678 1187 aa16.74■□□□□ 0.27
SRP54-202ENST00000546080 KRT222Q8N1A0 295 aa16.74■□□□□ 0.27
SRP54-202ENST00000546080 ALDH8A1Q9H2A2 487 aaPredicted RBP16.74■□□□□ 0.27
SRP54-202ENST00000546080 PTPRUQ92729 1446 aa16.73■□□□□ 0.27
SRP54-202ENST00000546080 RBM6P78332 1123 aaKnown RBP16.73■□□□□ 0.27
SRP54-202ENST00000546080 MRFAP1L1Q96HT8 127 aa16.73■□□□□ 0.27
SRP54-202ENST00000546080 BCL11BQ9C0K0 894 aaPredicted RBP16.73■□□□□ 0.27
SRP54-202ENST00000546080 PA2G4Q9UQ80 394 aaKnown RBP16.73■□□□□ 0.27
SRP54-202ENST00000546080 GIGYF1O75420 1035 aaPredicted RBP16.72■□□□□ 0.27
SRP54-202ENST00000546080 SLFN14P0C7P3 912 aa16.72■□□□□ 0.27
SRP54-202ENST00000546080 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
SRP54-202ENST00000546080 USP27XA6NNY8 438 aa16.72■□□□□ 0.27
SRP54-202ENST00000546080 IQCB1Q15051 598 aa16.72■□□□□ 0.27
SRP54-202ENST00000546080 ZNF215Q9UL58 517 aaPredicted RBP16.72■□□□□ 0.27
SRP54-202ENST00000546080 NPHP4O75161 1426 aaPredicted RBP16.72■□□□□ 0.27
SRP54-202ENST00000546080 A0A0D9SFI3 127 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 HOXB7P09629 217 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 SKILP12757 684 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 HOXC9P31274 260 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 EIF4A1P60842 406 aaKnown RBP16.71■□□□□ 0.27
SRP54-202ENST00000546080 RESTQ13127 1097 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 STX1AQ16623 288 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.27
SRP54-202ENST00000546080 SNRKQ9NRH2 765 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 C9orf78Q9NZ63 289 aaPredicted RBP16.71■□□□□ 0.27
SRP54-202ENST00000546080 ADCY9O60503 1353 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 NWD1Q149M9 1564 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 H3BQV1 296 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 ARID5BQ14865 1188 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 KMT5BQ4FZB7 885 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms