RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 FRAT1Q92837 279 aaPredicted RBP14.89□□□□□ -0.03
SNHG1-221ENST00000544983 SRCIN1Q9C0H9 1055 aa14.89□□□□□ -0.03
SNHG1-221ENST00000544983 CD2APQ9Y5K6 639 aa14.89□□□□□ -0.03
SNHG1-221ENST00000544983 UBN2Q6ZU65 1347 aa14.89□□□□□ -0.03
SNHG1-221ENST00000544983 NEURL1BA8MQ27 555 aa14.88□□□□□ -0.03
SNHG1-221ENST00000544983 F6X3S4 739 aa14.88□□□□□ -0.03
SNHG1-221ENST00000544983 PPP1R1BQ9UD71 204 aaPredicted RBP14.88□□□□□ -0.03
SNHG1-221ENST00000544983 NRXN2Q9P2S2 1712 aa14.88□□□□□ -0.03
SNHG1-221ENST00000544983 ATP5J2-PTCD1G3V325 749 aa14.87□□□□□ -0.03
SNHG1-221ENST00000544983 NTSR2O95665 410 aa14.87□□□□□ -0.03
SNHG1-221ENST00000544983 IGKV5-2P06315 115 aa14.87□□□□□ -0.03
SNHG1-221ENST00000544983 TRIM27P14373 513 aa14.87□□□□□ -0.03
SNHG1-221ENST00000544983 SUSD4Q5VX71 490 aa14.87□□□□□ -0.03
SNHG1-221ENST00000544983 SLC4A10Q6U841 1118 aa14.87□□□□□ -0.03
SNHG1-221ENST00000544983 ZBTB38Q8NAP3 1195 aaPredicted RBP14.87□□□□□ -0.03
SNHG1-221ENST00000544983 BRIP1Q9BX63 1249 aa14.87□□□□□ -0.03
SNHG1-221ENST00000544983 TRMT112Q9UI30 125 aaKnown RBP14.87□□□□□ -0.03
SNHG1-221ENST00000544983 SH3TC1Q8TE82 1336 aa14.87□□□□□ -0.03
SNHG1-221ENST00000544983 RIC1Q4ADV7 1423 aa14.86□□□□□ -0.03
SNHG1-221ENST00000544983 PCCAP05165 728 aaPredicted RBP14.86□□□□□ -0.03
SNHG1-221ENST00000544983 GCKRQ14397 625 aa14.86□□□□□ -0.03
SNHG1-221ENST00000544983 SLC10A5Q5PT55 438 aa14.86□□□□□ -0.03
SNHG1-221ENST00000544983 PRR5LQ6MZQ0 368 aa14.86□□□□□ -0.03
SNHG1-221ENST00000544983 HDAC5Q9UQL6 1122 aa14.86□□□□□ -0.03
SNHG1-221ENST00000544983 ABCC4O15439 1325 aa14.86□□□□□ -0.03
SNHG1-221ENST00000544983 C10orf71Q711Q0 1435 aa14.85□□□□□ -0.03
SNHG1-221ENST00000544983 PDE6BP35913 854 aa14.85□□□□□ -0.03
SNHG1-221ENST00000544983 TGFB2P61812 414 aa14.85□□□□□ -0.03
SNHG1-221ENST00000544983 INTS3Q68E01 1043 aaKnown RBP14.85□□□□□ -0.03
SNHG1-221ENST00000544983 FTSJ3Q8IY81 847 aaKnown RBP14.85□□□□□ -0.03
SNHG1-221ENST00000544983 DZIP1LQ8IYY4 767 aaKnown RBP14.85□□□□□ -0.03
SNHG1-221ENST00000544983 AFDNP55196 1824 aaKnown RBP14.85□□□□□ -0.03
SNHG1-221ENST00000544983 PDE3AQ14432 1141 aa14.84□□□□□ -0.03
SNHG1-221ENST00000544983 CWF19L2Q2TBE0 894 aaKnown RBP14.84□□□□□ -0.03
SNHG1-221ENST00000544983 C9orf78Q9NZ63 289 aaPredicted RBP14.84□□□□□ -0.03
SNHG1-221ENST00000544983 CDHR2Q9BYE9 1310 aa14.84□□□□□ -0.03
SNHG1-221ENST00000544983 KLRG2A4D1S0 409 aaPredicted RBP14.83□□□□□ -0.04
SNHG1-221ENST00000544983 H7C1W4 665 aa14.83□□□□□ -0.04
SNHG1-221ENST00000544983 GRM8O00222 908 aa14.83□□□□□ -0.04
SNHG1-221ENST00000544983 KIF13BQ9NQT8 1826 aa14.82□□□□□ -0.04
SNHG1-221ENST00000544983 FAM177BA6PVY3 158 aa14.82□□□□□ -0.04
SNHG1-221ENST00000544983 ERFEQ4G0M1 354 aa14.82□□□□□ -0.04
SNHG1-221ENST00000544983 FAM89AQ96GI7 184 aa14.82□□□□□ -0.04
SNHG1-221ENST00000544983 NLRP3Q96P20 1036 aa14.82□□□□□ -0.04
SNHG1-221ENST00000544983 CHMP4BQ9H444 224 aaKnown RBP14.82□□□□□ -0.04
SNHG1-221ENST00000544983 UTYO14607 1347 aa14.82□□□□□ -0.04
SNHG1-221ENST00000544983 N4BP2Q86UW6 1770 aaPredicted RBP14.81□□□□□ -0.04
SNHG1-221ENST00000544983 IRS4O14654 1257 aaPredicted RBP14.81□□□□□ -0.04
SNHG1-221ENST00000544983 NUTM1Q86Y26 1132 aa14.81□□□□□ -0.04
SNHG1-221ENST00000544983 PLA2G12BQ9BX93 195 aa14.81□□□□□ -0.04
SNHG1-221ENST00000544983 H0YIN7 160 aa14.8□□□□□ -0.04
SNHG1-221ENST00000544983 PDE8AO60658 829 aa14.8□□□□□ -0.04
SNHG1-221ENST00000544983 GNAI3P08754 354 aa14.8□□□□□ -0.04
SNHG1-221ENST00000544983 CRY2Q49AN0 593 aa14.8□□□□□ -0.04
SNHG1-221ENST00000544983 UBE3BQ7Z3V4 1068 aa14.8□□□□□ -0.04
SNHG1-221ENST00000544983 CLUAP1Q96AJ1 413 aa14.8□□□□□ -0.04
SNHG1-221ENST00000544983 FHDC1Q9C0D6 1143 aaPredicted RBP14.8□□□□□ -0.04
SNHG1-221ENST00000544983 DCAF8L1A6NGE4 600 aa14.79□□□□□ -0.04
SNHG1-221ENST00000544983 CENPBP07199 599 aaPredicted RBP14.79□□□□□ -0.04
SNHG1-221ENST00000544983 RRP1P56182 461 aaKnown RBP14.79□□□□□ -0.04
SNHG1-221ENST00000544983 C1QTNF8P60827 252 aa14.79□□□□□ -0.04
SNHG1-221ENST00000544983 ZNF784Q8NCA9 323 aaPredicted RBP14.79□□□□□ -0.04
SNHG1-221ENST00000544983 SYT17Q9BSW7 474 aa14.79□□□□□ -0.04
SNHG1-221ENST00000544983 USP44Q9H0E7 712 aa14.79□□□□□ -0.04
SNHG1-221ENST00000544983 ABCC12Q96J65 1359 aa14.78□□□□□ -0.04
SNHG1-221ENST00000544983 SRGNP10124 158 aa14.78□□□□□ -0.04
SNHG1-221ENST00000544983 HCLS1P14317 486 aaPredicted RBP14.78□□□□□ -0.04
SNHG1-221ENST00000544983 NPR1P16066 1061 aa14.78□□□□□ -0.04
SNHG1-221ENST00000544983 HOXA10P31260 410 aaPredicted RBP14.78□□□□□ -0.04
SNHG1-221ENST00000544983 CASP7P55210 303 aa14.78□□□□□ -0.04
SNHG1-221ENST00000544983 SF3B3Q15393 1217 aaKnown RBP14.78□□□□□ -0.04
SNHG1-221ENST00000544983 STYK1Q6J9G0 422 aa14.78□□□□□ -0.04
SNHG1-221ENST00000544983 TMEM57Q8N5G2 664 aa14.78□□□□□ -0.04
SNHG1-221ENST00000544983 UBTFL1P0CB47 393 aaPredicted RBP14.77□□□□□ -0.05
SNHG1-221ENST00000544983 ALDH1B1P30837 517 aa14.77□□□□□ -0.05
SNHG1-221ENST00000544983 CCDC152Q4G0S7 254 aa14.77□□□□□ -0.05
SNHG1-221ENST00000544983 C2CD5Q86YS7 1000 aa14.77□□□□□ -0.05
SNHG1-221ENST00000544983 ITPRIPQ8IWB1 547 aa14.77□□□□□ -0.05
SNHG1-221ENST00000544983 KLHL34Q8N239 644 aa14.77□□□□□ -0.05
SNHG1-221ENST00000544983 RPGRQ92834 1020 aaKnown RBP14.77□□□□□ -0.05
SNHG1-221ENST00000544983 MASTLQ96GX5 879 aa14.77□□□□□ -0.05
SNHG1-221ENST00000544983 DDX19BQ9UMR2 479 aa14.77□□□□□ -0.05
SNHG1-221ENST00000544983 LAMB2P55268 1798 aa14.76□□□□□ -0.05
SNHG1-221ENST00000544983 PLIN1O60240 522 aa14.76□□□□□ -0.05
SNHG1-221ENST00000544983 RLBP1P12271 317 aa14.76□□□□□ -0.05
SNHG1-221ENST00000544983 MVPQ14764 893 aaKnown RBP14.76□□□□□ -0.05
SNHG1-221ENST00000544983 RTL5Q5HYW3 569 aaPredicted RBP14.76□□□□□ -0.05
SNHG1-221ENST00000544983 SYNE4Q8N205 404 aa14.76□□□□□ -0.05
SNHG1-221ENST00000544983 CNKSR1Q969H4 720 aa14.76□□□□□ -0.05
SNHG1-221ENST00000544983 RBM17Q96I25 401 aaKnown RBP14.76□□□□□ -0.05
SNHG1-221ENST00000544983 CRAMP1Q96RY5 1269 aa14.76□□□□□ -0.05
SNHG1-221ENST00000544983 PIM2Q9P1W9 311 aa14.76□□□□□ -0.05
SNHG1-221ENST00000544983 ANKRD31Q8N7Z5 1873 aa14.76□□□□□ -0.05
SNHG1-221ENST00000544983 RTL9Q8NET4 1388 aa14.75□□□□□ -0.05
SNHG1-221ENST00000544983 CSF1RP07333 972 aa14.75□□□□□ -0.05
SNHG1-221ENST00000544983 NBPF7P0C2Y1 421 aaPredicted RBP14.75□□□□□ -0.05
SNHG1-221ENST00000544983 CTSWP56202 376 aa14.75□□□□□ -0.05
SNHG1-221ENST00000544983 CCDC24Q8N4L8 307 aa14.75□□□□□ -0.05
SNHG1-221ENST00000544983 PANK1Q8TE04 598 aa14.75□□□□□ -0.05
SNHG1-221ENST00000544983 A0A0G2JLW4 131 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms