RNA–Protein interactions for RNA: ENST00000544868.2

MALAT1-203, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-203ENST00000544868 USP42Q9H9J4 1324 aaKnown RBP11.6□□□□□ -0.55
MALAT1-203ENST00000544868 NRXN2Q9P2S2 1712 aa11.6□□□□□ -0.55
MALAT1-203ENST00000544868 HUNKP57058 714 aa11.6□□□□□ -0.55
MALAT1-203ENST00000544868 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.6□□□□□ -0.55
MALAT1-203ENST00000544868 HTTP42858 3142 aa11.6□□□□□ -0.55
MALAT1-203ENST00000544868 TTC21AQ8NDW8 1320 aa11.6□□□□□ -0.55
MALAT1-203ENST00000544868 PCDH11XQ9BZA7 1347 aa11.6□□□□□ -0.55
MALAT1-203ENST00000544868 PCDH11YQ9BZA8 1340 aa11.6□□□□□ -0.55
MALAT1-203ENST00000544868 RGPD2P0DJD1 1756 aa11.59□□□□□ -0.55
MALAT1-203ENST00000544868 CENPFP49454 3210 aa11.59□□□□□ -0.55
MALAT1-203ENST00000544868 LMOD1P29536 600 aaPredicted RBP11.59□□□□□ -0.55
MALAT1-203ENST00000544868 TM4SF1P30408 202 aa11.59□□□□□ -0.55
MALAT1-203ENST00000544868 RC3H1Q5TC82 1133 aaKnown RBP11.59□□□□□ -0.55
MALAT1-203ENST00000544868 GPC2Q8N158 579 aa11.59□□□□□ -0.55
MALAT1-203ENST00000544868 COL5A3P25940 1745 aaPredicted RBP11.59□□□□□ -0.55
MALAT1-203ENST00000544868 CNTNAP4Q9C0A0 1308 aa11.59□□□□□ -0.55
MALAT1-203ENST00000544868 TMEM265A0A087WTH1 108 aa11.58□□□□□ -0.56
MALAT1-203ENST00000544868 ZNF622Q969S3 477 aaKnown RBP eCLIP11.58□□□□□ -0.56not detected■■□□□ 12.5
MALAT1-203ENST00000544868 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
MALAT1-203ENST00000544868 CGNL1Q0VF96 1302 aa11.58□□□□□ -0.56
MALAT1-203ENST00000544868 SYNGAP1Q96PV0 1343 aa11.58□□□□□ -0.56
MALAT1-203ENST00000544868 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
MALAT1-203ENST00000544868 A0A1W2PPC1 479 aa11.57□□□□□ -0.56
MALAT1-203ENST00000544868 RGMBQ6NW40 437 aa11.57□□□□□ -0.56
MALAT1-203ENST00000544868 USP50Q70EL3 339 aaPredicted RBP11.57□□□□□ -0.56
MALAT1-203ENST00000544868 Q7L0L9 218 aa11.57□□□□□ -0.56
MALAT1-203ENST00000544868 ASAP1Q9ULH1 1129 aa11.57□□□□□ -0.56
MALAT1-203ENST00000544868 MYH14Q7Z406 1995 aaKnown RBP11.57□□□□□ -0.56
MALAT1-203ENST00000544868 KDRP35968 1356 aa11.56□□□□□ -0.56
MALAT1-203ENST00000544868 CARMIL3Q8ND23 1372 aa11.56□□□□□ -0.56
MALAT1-203ENST00000544868 GPR153Q6NV75 609 aa11.56□□□□□ -0.56
MALAT1-203ENST00000544868 CCDC102AQ96A19 550 aa11.56□□□□□ -0.56
MALAT1-203ENST00000544868 CSRNP1Q96S65 589 aa11.56□□□□□ -0.56
MALAT1-203ENST00000544868 GLIS2Q9BZE0 524 aaPredicted RBP11.56□□□□□ -0.56
MALAT1-203ENST00000544868 CACNA1SQ13698 1873 aa11.55□□□□□ -0.56
MALAT1-203ENST00000544868 BCORQ6W2J9 1755 aa11.55□□□□□ -0.56
MALAT1-203ENST00000544868 EPS15P42566 896 aa11.55□□□□□ -0.56
MALAT1-203ENST00000544868 SOGA3Q5TF21 947 aa11.55□□□□□ -0.56
MALAT1-203ENST00000544868 COL11A2P13942 1736 aaPredicted RBP11.55□□□□□ -0.56
MALAT1-203ENST00000544868 FZD9O00144 591 aa11.54□□□□□ -0.56
MALAT1-203ENST00000544868 MAP3K12Q12852 859 aa11.54□□□□□ -0.56
MALAT1-203ENST00000544868 MTMR10Q9NXD2 777 aa11.54□□□□□ -0.56
MALAT1-203ENST00000544868 MAP3K19Q56UN5 1328 aa11.54□□□□□ -0.56
MALAT1-203ENST00000544868 SLX4Q8IY92 1834 aa11.53□□□□□ -0.56
MALAT1-203ENST00000544868 ZNF831Q5JPB2 1677 aa11.53□□□□□ -0.56
MALAT1-203ENST00000544868 PPEF1O14829 653 aaPredicted RBP11.53□□□□□ -0.56
MALAT1-203ENST00000544868 CYP27B1O15528 508 aa11.53□□□□□ -0.56
MALAT1-203ENST00000544868 PDE4AP27815 886 aa11.53□□□□□ -0.56
MALAT1-203ENST00000544868 TMC2Q8TDI7 906 aa11.53□□□□□ -0.56
MALAT1-203ENST00000544868 RAPGEF4Q8WZA2 1011 aa11.53□□□□□ -0.56
MALAT1-203ENST00000544868 IP6K1Q92551 441 aa11.53□□□□□ -0.56
MALAT1-203ENST00000544868 TBC1D8O95759 1140 aa11.52□□□□□ -0.57
MALAT1-203ENST00000544868 SCNN1DP51172 638 aa11.52□□□□□ -0.57
MALAT1-203ENST00000544868 ZNF157P51786 506 aaPredicted RBP11.52□□□□□ -0.57
MALAT1-203ENST00000544868 ZNF277Q9NRM2 450 aaPredicted RBP11.52□□□□□ -0.57
MALAT1-203ENST00000544868 TMOD3Q9NYL9 352 aa11.52□□□□□ -0.57
MALAT1-203ENST00000544868 GJA3Q9Y6H8 435 aa11.52□□□□□ -0.57
MALAT1-203ENST00000544868 ANKRD31Q8N7Z5 1873 aa11.51□□□□□ -0.57
MALAT1-203ENST00000544868 GPR25O00155 361 aa11.51□□□□□ -0.57
MALAT1-203ENST00000544868 SERPINB2P05120 415 aa11.51□□□□□ -0.57
MALAT1-203ENST00000544868 NFIXQ14938 502 aa11.51□□□□□ -0.57
MALAT1-203ENST00000544868 SLC4A9Q96Q91 983 aa11.51□□□□□ -0.57
MALAT1-203ENST00000544868 MON2Q7Z3U7 1717 aa11.5□□□□□ -0.57
MALAT1-203ENST00000544868 ARFGEF2Q9Y6D5 1785 aa11.5□□□□□ -0.57
MALAT1-203ENST00000544868 SLC10A3P09131 477 aa11.5□□□□□ -0.57
MALAT1-203ENST00000544868 TATP17735 454 aaPredicted RBP11.5□□□□□ -0.57
MALAT1-203ENST00000544868 SYMPKQ92797 1274 aaKnown RBP11.5□□□□□ -0.57
MALAT1-203ENST00000544868 ATG3Q9NT62 314 aa11.5□□□□□ -0.57
MALAT1-203ENST00000544868 CACNA1GO43497 2377 aa11.49□□□□□ -0.57
MALAT1-203ENST00000544868 TNFRSF10AO00220 468 aa11.49□□□□□ -0.57
MALAT1-203ENST00000544868 NOM1Q5C9Z4 860 aaKnown RBP11.49□□□□□ -0.57
MALAT1-203ENST00000544868 USPL1Q5W0Q7 1092 aa11.49□□□□□ -0.57
MALAT1-203ENST00000544868 PRPF40BQ6NWY9 871 aaKnown RBP11.49□□□□□ -0.57
MALAT1-203ENST00000544868 DPF3Q92784 378 aa11.49□□□□□ -0.57
MALAT1-203ENST00000544868 CRISPLD2Q9H0B8 497 aa11.49□□□□□ -0.57
MALAT1-203ENST00000544868 GPHNQ9NQX3 736 aaPredicted RBP11.49□□□□□ -0.57
MALAT1-203ENST00000544868 PDZRN3Q9UPQ7 1066 aa11.49□□□□□ -0.57
MALAT1-203ENST00000544868 LAMA2P24043 3122 aaKnown RBP11.49□□□□□ -0.57
MALAT1-203ENST00000544868 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
MALAT1-203ENST00000544868 FKBP4Q02790 459 aaKnown RBP eCLIP11.48□□□□□ -0.57
MALAT1-203ENST00000544868 CCDC93Q567U6 631 aa11.48□□□□□ -0.57
MALAT1-203ENST00000544868 USHBP1Q8N6Y0 703 aa11.48□□□□□ -0.57
MALAT1-203ENST00000544868 SLAIN1Q8ND83 568 aa11.48□□□□□ -0.57
MALAT1-203ENST00000544868 RPTORQ8N122 1335 aa11.48□□□□□ -0.57
MALAT1-203ENST00000544868 PKD1L2Q7Z442 2459 aa11.48□□□□□ -0.57
MALAT1-203ENST00000544868 FKTNO75072 461 aa11.47□□□□□ -0.57
MALAT1-203ENST00000544868 ZPR1O75312 459 aa11.47□□□□□ -0.57
MALAT1-203ENST00000544868 EIF6P56537 245 aaKnown RBP11.47□□□□□ -0.57
MALAT1-203ENST00000544868 VSIG10Q8N0Z9 540 aa11.47□□□□□ -0.57
MALAT1-203ENST00000544868 CNKSR1Q969H4 720 aa11.47□□□□□ -0.57
MALAT1-203ENST00000544868 ARMC5Q96C12 935 aa11.47□□□□□ -0.57
MALAT1-203ENST00000544868 TRIM17Q9Y577 477 aa11.47□□□□□ -0.57
MALAT1-203ENST00000544868 C2orf72A6NCS6 295 aa11.46□□□□□ -0.57
MALAT1-203ENST00000544868 PDE6BP35913 854 aa11.46□□□□□ -0.57
MALAT1-203ENST00000544868 IARSP41252 1262 aaKnown RBP11.46□□□□□ -0.57
MALAT1-203ENST00000544868 TMEM92Q6UXU6 159 aa11.46□□□□□ -0.57
MALAT1-203ENST00000544868 CDC37L1Q7L3B6 337 aa11.46□□□□□ -0.57
MALAT1-203ENST00000544868 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.46□□□□□ -0.57
MALAT1-203ENST00000544868 FAM163AQ96GL9 167 aaPredicted RBP11.46□□□□□ -0.57
MALAT1-203ENST00000544868 LARP6Q9BRS8 491 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms