RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 BAG6P46379 1132 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 F8W031 263 aaPredicted RBP8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 PRPF40AO75400 957 aaKnown RBP8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 ZNF804AQ7Z570 1209 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 CATIPQ7Z7H3 387 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 CEP131Q9UPN4 1083 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 A0A1W2PP64 1363 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 RDXP35241 583 aaKnown RBP8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 EYA3Q99504 573 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 TANGO6Q9C0B7 1094 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 EHMT1Q9H9B1 1298 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 ENOX2Q16206 610 aaKnown RBP8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 PPP4R3AQ6IN85 833 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 LINS1Q8NG48 757 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 SMARCE1Q969G3 411 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 UPF3BQ9BZI7 483 aaKnown RBP8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 IQSEC3Q9UPP2 1182 aaPredicted RBP8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 SMC2O95347 1197 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 RNF214Q8ND24 703 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 IPO4Q8TEX9 1081 aaKnown RBP8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 TRIM5Q9C035 493 aa8.05□□□□□ -1.12
SRGAP1-206ENST00000543397 EIF2AK4Q9P2K8 1649 aaKnown RBP8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 EXOC8Q8IYI6 725 aa8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 PIK3R5Q8WYR1 880 aa8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 IL15P40933 162 aaPredicted RBP8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 CAVIN1Q6NZI2 390 aaKnown RBP8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 CNBD1Q8NA66 436 aa8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 ZFYVE9O95405 1425 aa8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 KIF5BP33176 963 aa8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 SPATA32Q96LK8 384 aa8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 RAB34Q9BZG1 259 aa8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 IRS4O14654 1257 aaPredicted RBP8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 RNMTO43148 476 aaKnown RBP8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 ARHGAP45Q92619 1136 aa8.04□□□□□ -1.12
SRGAP1-206ENST00000543397 GPS2Q13227 327 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 CEP57L1Q8IYX8 460 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 ZNHIT6Q9NWK9 470 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 STX8Q9UNK0 236 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 CCDC194A0A1B0GVG4 234 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 GOLGA8AA7E2F4 631 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 GOLGA8BA8MQT2 603 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 LMOD1P29536 600 aaPredicted RBP8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 MFSD6Q6ZSS7 791 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 DDX17Q92841 729 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 CYP7A1P22680 504 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 CCDC12Q8WUD4 166 aaPredicted RBP8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 KAT14Q9H8E8 782 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 ZFYP08048 801 aaPredicted RBP8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 SLC4A8Q2Y0W8 1093 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 NAA16Q6N069 864 aaPredicted RBP8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 RHPN1Q8TCX5 695 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 SPOCK2Q92563 424 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 TNMDQ9H2S6 317 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 VEZTQ9HBM0 779 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 APBA3O96018 575 aa8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 TRIM21P19474 475 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 MPHOSPH6Q99547 160 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-206ENST00000543397 ABCA5Q8WWZ7 1642 aa8.02□□□□□ -1.12
SRGAP1-206ENST00000543397 LTKP29376 864 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 C20orf194Q5TEA3 1177 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 C8orf76Q96K31 380 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 TESK2Q96S53 571 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 MEIS3Q99687 375 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 LUC7LQ9NQ29 371 aaKnown RBP8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 SBNO1A3KN83 1393 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 SPDYE4A6NLX3 237 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 SERPINC1P01008 464 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 PRIM1P49642 420 aaKnown RBP8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 TMEM266Q2M3C6 531 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 PPP4R3BQ5MIZ7 849 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 CCDC83Q8IWF9 413 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 C8orf58Q8NAV2 365 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 ANKRD2Q9GZV1 360 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 POLR3AO14802 1390 aaPredicted RBP8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 NLRP5P59047 1200 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 PPP1R12BO60237 982 aaPredicted RBP8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 HAND2P61296 217 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 TMEM67Q5HYA8 995 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 CCDC181Q5TID7 509 aa8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 SH2B1Q9NRF2 756 aaPredicted RBP8.02□□□□□ -1.13
SRGAP1-206ENST00000543397 EDC4Q6P2E9 1401 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 YEATS2Q9ULM3 1422 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 KIF4AO95239 1232 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 CCDC192P0DO97 292 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 HMGN5P82970 282 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 FAM160A1Q05DH4 1040 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 PARP10Q53GL7 1025 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 TTLL5Q6EMB2 1281 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 VAT1LQ9HCJ6 419 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 TRAF1Q13077 416 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 PICALMQ13492 652 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 ZNF790Q6PG37 636 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 FERMT3Q86UX7 667 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 RBM17Q96I25 401 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 PHAXQ9H814 394 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 MAST1Q9Y2H9 1570 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 PIK3C2GO75747 1445 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 PLEKHH1Q9ULM0 1364 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 RIMBP2O15034 1052 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 SSRP1Q08945 709 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms