RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 LAMB2P55268 1798 aa25.77■■□□□ 1.72
CACNA1C-230ENST00000543114 SLC51AQ86UW1 340 aa25.76■■□□□ 1.71
CACNA1C-230ENST00000543114 RPGRQ92834 1020 aaKnown RBP25.76■■□□□ 1.71
CACNA1C-230ENST00000543114 HOXA10P31260 410 aaPredicted RBP25.75■■□□□ 1.71
CACNA1C-230ENST00000543114 IARSP41252 1262 aaKnown RBP25.75■■□□□ 1.71
CACNA1C-230ENST00000543114 NEUROD2Q15784 382 aa25.75■■□□□ 1.71
CACNA1C-230ENST00000543114 CHADLQ6NUI6 762 aa25.75■■□□□ 1.71
CACNA1C-230ENST00000543114 C3orf67Q6ZVT6 689 aa25.75■■□□□ 1.71
CACNA1C-230ENST00000543114 IQCA1LA6NCM1 817 aa25.74■■□□□ 1.71
CACNA1C-230ENST00000543114 KRT24Q2M2I5 525 aa25.74■■□□□ 1.71
CACNA1C-230ENST00000543114 SYNE4Q8N205 404 aa25.74■■□□□ 1.71
CACNA1C-230ENST00000543114 NECTIN2Q92692 538 aa25.74■■□□□ 1.71
CACNA1C-230ENST00000543114 ADAMTSL1Q8N6G6 1762 aa25.74■■□□□ 1.71
CACNA1C-230ENST00000543114 PARP10Q53GL7 1025 aa25.73■■□□□ 1.71
CACNA1C-230ENST00000543114 PSMD1Q99460 953 aa25.73■■□□□ 1.71
CACNA1C-230ENST00000543114 PPP1R42Q7Z4L9 355 aa25.72■■□□□ 1.71
CACNA1C-230ENST00000543114 TAF1DQ9H5J8 278 aaPredicted RBP25.72■■□□□ 1.71
CACNA1C-230ENST00000543114 TRIM35Q9UPQ4 493 aa25.72■■□□□ 1.71
CACNA1C-230ENST00000543114 FZD9O00144 591 aa25.71■■□□□ 1.71
CACNA1C-230ENST00000543114 WDR43Q15061 677 aaKnown RBP eCLIP25.71■■□□□ 1.71
CACNA1C-230ENST00000543114 RUNDC1Q96C34 613 aa25.71■■□□□ 1.71
CACNA1C-230ENST00000543114 CC2D2BQ6DHV5 1058 aa25.7■■□□□ 1.7
CACNA1C-230ENST00000543114 CRAMP1Q96RY5 1269 aa25.7■■□□□ 1.7
CACNA1C-230ENST00000543114 CHL1O00533 1208 aa25.69■■□□□ 1.7
CACNA1C-230ENST00000543114 PPEF1O14829 653 aaPredicted RBP25.69■■□□□ 1.7
CACNA1C-230ENST00000543114 COPS6Q7L5N1 327 aa25.69■■□□□ 1.7
CACNA1C-230ENST00000543114 LDHDQ86WU2 507 aa25.69■■□□□ 1.7
CACNA1C-230ENST00000543114 XAGE3Q8WTP9 111 aa25.69■■□□□ 1.7
CACNA1C-230ENST00000543114 RBM17Q96I25 401 aaKnown RBP25.69■■□□□ 1.7
CACNA1C-230ENST00000543114 UTP14AQ9BVJ6 771 aaKnown RBP25.69■■□□□ 1.7
CACNA1C-230ENST00000543114 RNF123Q5XPI4 1314 aa25.68■■□□□ 1.7
CACNA1C-230ENST00000543114 AIMP1Q12904 312 aaKnown RBP25.68■■□□□ 1.7
CACNA1C-230ENST00000543114 ADAMTS8Q9UP79 889 aa25.68■■□□□ 1.7
CACNA1C-230ENST00000543114 LAS1LQ9Y4W2 734 aaKnown RBP25.68■■□□□ 1.7
CACNA1C-230ENST00000543114 LTBP1Q14766 1721 aa25.68■■□□□ 1.7
CACNA1C-230ENST00000543114 TCERG1O14776 1098 aaKnown RBP25.67■■□□□ 1.7
CACNA1C-230ENST00000543114 HACL1Q9UJ83 578 aa25.67■■□□□ 1.7
CACNA1C-230ENST00000543114 EAPPQ56P03 285 aaPredicted RBP25.66■■□□□ 1.7
CACNA1C-230ENST00000543114 NLRP3Q96P20 1036 aa25.66■■□□□ 1.7
CACNA1C-230ENST00000543114 DDX21Q9NR30 783 aaKnown RBP eCLIP25.66■■□□□ 1.7
CACNA1C-230ENST00000543114 CREBZFQ9NS37 354 aa25.66■■□□□ 1.7
CACNA1C-230ENST00000543114 CHPF2Q9P2E5 772 aa25.66■■□□□ 1.7
CACNA1C-230ENST00000543114 ABCC4O15439 1325 aa25.65■■□□□ 1.7
CACNA1C-230ENST00000543114 PASKQ96RG2 1323 aa25.65■■□□□ 1.7
CACNA1C-230ENST00000543114 EPHX2P34913 555 aa25.65■■□□□ 1.7
CACNA1C-230ENST00000543114 SLC10A5Q5PT55 438 aa25.65■■□□□ 1.7
CACNA1C-230ENST00000543114 NLRP10Q86W26 655 aa25.65■■□□□ 1.7
CACNA1C-230ENST00000543114 GPC2Q8N158 579 aa25.65■■□□□ 1.7
CACNA1C-230ENST00000543114 JDP2Q8WYK2 163 aa25.65■■□□□ 1.7
CACNA1C-230ENST00000543114 DDX60Q8IY21 1712 aaKnown RBP25.65■■□□□ 1.7
CACNA1C-230ENST00000543114 TAF1P21675 1872 aa25.64■■□□□ 1.7
CACNA1C-230ENST00000543114 HSP90AB3PQ58FF7 597 aa25.64■■□□□ 1.7
CACNA1C-230ENST00000543114 PRKRIP1Q9H875 184 aaPredicted RBP25.64■■□□□ 1.7
CACNA1C-230ENST00000543114 GRIPAP1Q4V328 841 aa25.63■■□□□ 1.69
CACNA1C-230ENST00000543114 COL13A1Q5TAT6 717 aaPredicted RBP25.62■■□□□ 1.69
CACNA1C-230ENST00000543114 HDGFL1Q5TGJ6 251 aa25.62■■□□□ 1.69
CACNA1C-230ENST00000543114 LARGE2Q8N3Y3 721 aa25.62■■□□□ 1.69
CACNA1C-230ENST00000543114 HSPA1AP0DMV8 641 aaKnown RBP25.61■■□□□ 1.69
CACNA1C-230ENST00000543114 HSPA1BP0DMV9 641 aaKnown RBP25.61■■□□□ 1.69
CACNA1C-230ENST00000543114 HCLS1P14317 486 aaPredicted RBP25.61■■□□□ 1.69
CACNA1C-230ENST00000543114 TCIRG1Q13488 830 aa25.61■■□□□ 1.69
CACNA1C-230ENST00000543114 MKRN1Q9UHC7 482 aaKnown RBP25.61■■□□□ 1.69
CACNA1C-230ENST00000543114 ATP6V0A2Q9Y487 856 aa25.61■■□□□ 1.69
CACNA1C-230ENST00000543114 ITGBL1O95965 494 aaPredicted RBP25.6■■□□□ 1.69
CACNA1C-230ENST00000543114 HOXB7P09629 217 aa25.6■■□□□ 1.69
CACNA1C-230ENST00000543114 EIF6P56537 245 aaKnown RBP25.6■■□□□ 1.69
CACNA1C-230ENST00000543114 ZNF428Q96B54 188 aa25.6■■□□□ 1.69
CACNA1C-230ENST00000543114 GJA3Q9Y6H8 435 aa25.6■■□□□ 1.69
CACNA1C-230ENST00000543114 LRRC37AA6NMS7 1700 aa25.6■■□□□ 1.69
CACNA1C-230ENST00000543114 TRMT112Q9UI30 125 aaKnown RBP25.59■■□□□ 1.69
CACNA1C-230ENST00000543114 SH3TC1Q8TE82 1336 aa25.59■■□□□ 1.69
CACNA1C-230ENST00000543114 PPIP5K2O43314 1243 aa25.58■■□□□ 1.69
CACNA1C-230ENST00000543114 AOC3Q16853 763 aa25.58■■□□□ 1.69
CACNA1C-230ENST00000543114 PNMA8AQ86V59 439 aaPredicted RBP25.58■■□□□ 1.69
CACNA1C-230ENST00000543114 CFAP44Q96MT7 982 aa25.58■■□□□ 1.69
CACNA1C-230ENST00000543114 MBIPQ9NS73 344 aa25.58■■□□□ 1.69
CACNA1C-230ENST00000543114 CLEC11AQ9Y240 323 aa25.58■■□□□ 1.69
CACNA1C-230ENST00000543114 CNTNAP1P78357 1384 aa25.57■■□□□ 1.68
CACNA1C-230ENST00000543114 SCNN1DP51172 638 aa25.57■■□□□ 1.68
CACNA1C-230ENST00000543114 MAP1SQ66K74 1059 aaPredicted RBP25.57■■□□□ 1.68
CACNA1C-230ENST00000543114 NIM1KQ8IY84 436 aa25.57■■□□□ 1.68
CACNA1C-230ENST00000543114 DBF4Q9UBU7 674 aaPredicted RBP25.57■■□□□ 1.68
CACNA1C-230ENST00000543114 DUOX1Q9NRD9 1551 aa25.56■■□□□ 1.68
CACNA1C-230ENST00000543114 DUSP27Q5VZP5 1158 aa25.56■■□□□ 1.68
CACNA1C-230ENST00000543114 PLBD2Q8NHP8 589 aa25.56■■□□□ 1.68
CACNA1C-230ENST00000543114 TMX4Q9H1E5 349 aaPredicted RBP25.55■■□□□ 1.68
CACNA1C-230ENST00000543114 COL4A1P02462 1669 aa25.55■■□□□ 1.68
CACNA1C-230ENST00000543114 TMEM88BA6NKF7 163 aa25.54■■□□□ 1.68
CACNA1C-230ENST00000543114 LMOD1P29536 600 aaPredicted RBP25.54■■□□□ 1.68
CACNA1C-230ENST00000543114 ISCA1Q9BUE6 129 aa25.54■■□□□ 1.68
CACNA1C-230ENST00000543114 RTFDC1Q9BY42 306 aaPredicted RBP25.54■■□□□ 1.68
CACNA1C-230ENST00000543114 APAF1O14727 1248 aa25.53■■□□□ 1.68
CACNA1C-230ENST00000543114 BBOX1O75936 387 aa25.53■■□□□ 1.68
CACNA1C-230ENST00000543114 ZNF853P0CG23 659 aa25.53■■□□□ 1.68
CACNA1C-230ENST00000543114 EPS15P42566 896 aa25.53■■□□□ 1.68
CACNA1C-230ENST00000543114 GRAPQ13588 217 aa25.53■■□□□ 1.68
CACNA1C-230ENST00000543114 ANKRD13DQ6ZTN6 518 aa25.53■■□□□ 1.68
CACNA1C-230ENST00000543114 CNTROBQ8N137 903 aa25.53■■□□□ 1.68
CACNA1C-230ENST00000543114 GRAPLQ8TC17 118 aaPredicted RBP25.53■■□□□ 1.68
CACNA1C-230ENST00000543114 DPP8Q6V1X1 898 aaPredicted RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms