RNA–Protein interactions for RNA: ENST00000540814.1

AC006065.4-202, humanhuman

TSL 2

Gene AC006065.4, Length 410 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006065.4-202ENST00000540814 ATG3Q9NT62 314 aa6.73□□□□□ -1.33
AC006065.4-202ENST00000540814 WASHC2AQ641Q2 1341 aa6.73□□□□□ -1.33
AC006065.4-202ENST00000540814 GNPATO15228 680 aa6.72□□□□□ -1.33
AC006065.4-202ENST00000540814 PHKG2P15735 406 aa6.72□□□□□ -1.33
AC006065.4-202ENST00000540814 TNNT2P45379 298 aaPredicted RBP6.72□□□□□ -1.33
AC006065.4-202ENST00000540814 SMARCC1Q92922 1105 aaPredicted RBP6.72□□□□□ -1.33
AC006065.4-202ENST00000540814 GPBP1L1Q9HC44 474 aaPredicted RBP6.72□□□□□ -1.33
AC006065.4-202ENST00000540814 TMOD3Q9NYL9 352 aa6.72□□□□□ -1.33
AC006065.4-202ENST00000540814 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.72□□□□□ -1.33
AC006065.4-202ENST00000540814 POLKQ9UBT6 870 aa6.72□□□□□ -1.33
AC006065.4-202ENST00000540814 V9GY48 417 aaPredicted RBP6.72□□□□□ -1.33
AC006065.4-202ENST00000540814 C4AP0C0L4 1744 aa6.72□□□□□ -1.33
AC006065.4-202ENST00000540814 BRCA1P38398 1863 aaKnown RBP6.72□□□□□ -1.33
AC006065.4-202ENST00000540814 KDM6AO15550 1401 aaPredicted RBP6.71□□□□□ -1.34
AC006065.4-202ENST00000540814 C10orf71Q711Q0 1435 aa6.71□□□□□ -1.34
AC006065.4-202ENST00000540814 MMP10P09238 476 aa6.71□□□□□ -1.34
AC006065.4-202ENST00000540814 SSFA2P28290 1259 aa6.71□□□□□ -1.34
AC006065.4-202ENST00000540814 ATP6V1AP38606 617 aa6.71□□□□□ -1.34
AC006065.4-202ENST00000540814 EIF4A2Q14240 407 aaKnown RBP6.71□□□□□ -1.34
AC006065.4-202ENST00000540814 SPG7Q9UQ90 795 aa6.71□□□□□ -1.34
AC006065.4-202ENST00000540814 SLC24A1O60721 1099 aa6.7□□□□□ -1.34
AC006065.4-202ENST00000540814 HSPA6P17066 643 aa6.7□□□□□ -1.34
AC006065.4-202ENST00000540814 AEBP1Q8IUX7 1158 aa6.7□□□□□ -1.34
AC006065.4-202ENST00000540814 SLF2Q8IX21 1173 aa6.7□□□□□ -1.34
AC006065.4-202ENST00000540814 NPDC1Q9NQX5 325 aaPredicted RBP6.7□□□□□ -1.34
AC006065.4-202ENST00000540814 RBM27Q9P2N5 1060 aaKnown RBP6.7□□□□□ -1.34
AC006065.4-202ENST00000540814 TJP1Q07157 1748 aa6.7□□□□□ -1.34
AC006065.4-202ENST00000540814 ZNF831Q5JPB2 1677 aa6.69□□□□□ -1.34
AC006065.4-202ENST00000540814 A0A0G2JLW4 131 aa6.69□□□□□ -1.34
AC006065.4-202ENST00000540814 CDCA8Q53HL2 280 aa6.69□□□□□ -1.34
AC006065.4-202ENST00000540814 ZNF787Q6DD87 383 aa6.69□□□□□ -1.34
AC006065.4-202ENST00000540814 BLOC1S3Q6QNY0 202 aa6.69□□□□□ -1.34
AC006065.4-202ENST00000540814 IFNL2Q8IZJ0 200 aa6.69□□□□□ -1.34
AC006065.4-202ENST00000540814 POLR3GLQ9BT43 218 aa6.69□□□□□ -1.34
AC006065.4-202ENST00000540814 PCDHB3Q9Y5E6 796 aa6.69□□□□□ -1.34
AC006065.4-202ENST00000540814 ADAMTS7Q9UKP4 1686 aa6.68□□□□□ -1.34
AC006065.4-202ENST00000540814 ZPR1O75312 459 aa6.68□□□□□ -1.34
AC006065.4-202ENST00000540814 GYS1P13807 737 aa6.68□□□□□ -1.34
AC006065.4-202ENST00000540814 DPEP1P16444 411 aa6.68□□□□□ -1.34
AC006065.4-202ENST00000540814 GGCXP38435 758 aa6.68□□□□□ -1.34
AC006065.4-202ENST00000540814 MLLT3P42568 568 aaPredicted RBP6.68□□□□□ -1.34
AC006065.4-202ENST00000540814 FAM161AQ3B820 660 aa6.68□□□□□ -1.34
AC006065.4-202ENST00000540814 TTC13Q8NBP0 860 aa6.68□□□□□ -1.34
AC006065.4-202ENST00000540814 ARHGEF1Q92888 912 aaKnown RBP6.68□□□□□ -1.34
AC006065.4-202ENST00000540814 NMRK2Q9NPI5 230 aa6.68□□□□□ -1.34
AC006065.4-202ENST00000540814 SRP68Q9UHB9 627 aaKnown RBP6.68□□□□□ -1.34
AC006065.4-202ENST00000540814 ARFGEF1Q9Y6D6 1849 aa6.68□□□□□ -1.34
AC006065.4-202ENST00000540814 KCNA3P22001 575 aa6.67□□□□□ -1.34
AC006065.4-202ENST00000540814 DDR1Q08345 913 aa6.67□□□□□ -1.34
AC006065.4-202ENST00000540814 TRAPPC3LQ5T215 181 aa6.67□□□□□ -1.34
AC006065.4-202ENST00000540814 ZNF530Q6P9A1 599 aaPredicted RBP6.67□□□□□ -1.34
AC006065.4-202ENST00000540814 BCS1LQ9Y276 419 aa6.67□□□□□ -1.34
AC006065.4-202ENST00000540814 RTCBQ9Y3I0 505 aaKnown RBP6.67□□□□□ -1.34
AC006065.4-202ENST00000540814 ARIH1Q9Y4X5 557 aaPredicted RBP6.67□□□□□ -1.34
AC006065.4-202ENST00000540814 CNTNAP4Q9C0A0 1308 aa6.67□□□□□ -1.34
AC006065.4-202ENST00000540814 SCN11AQ9UI33 1791 aa6.67□□□□□ -1.34
AC006065.4-202ENST00000540814 VIRMAQ69YN4 1812 aaKnown RBP6.66□□□□□ -1.34
AC006065.4-202ENST00000540814 SBF1O95248 1867 aa6.66□□□□□ -1.34
AC006065.4-202ENST00000540814 ERVV-2B6SEH9 535 aa6.66□□□□□ -1.34
AC006065.4-202ENST00000540814 RNF223E7ERA6 249 aa6.66□□□□□ -1.34
AC006065.4-202ENST00000540814 PPEF1O14829 653 aaPredicted RBP6.66□□□□□ -1.34
AC006065.4-202ENST00000540814 PTCD1O75127 700 aaKnown RBP6.66□□□□□ -1.34
AC006065.4-202ENST00000540814 HTRA3P83110 453 aa6.66□□□□□ -1.34
AC006065.4-202ENST00000540814 ARHGAP27Q6ZUM4 889 aa6.66□□□□□ -1.34
AC006065.4-202ENST00000540814 WDR90Q96KV7 1748 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 AFDNP55196 1824 aaKnown RBP6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 RPS6KA4O75676 772 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 FCHSD2O94868 740 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 CHRNA5P30532 468 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 RFC4P35249 363 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 SLC4A3P48751 1232 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 CABP4P57796 275 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 TGFB2P61812 414 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 RC3H1Q5TC82 1133 aaKnown RBP6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 TRIM67Q6ZTA4 783 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 NLGN1Q8N2Q7 840 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 DNAJC5GQ8N7S2 189 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 NFATC2IPQ8NCF5 419 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 EMID1Q96A84 441 aaPredicted RBP6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 DCAF5Q96JK2 942 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 KRTAP4-6Q9BYQ5 205 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 PANK3Q9H999 370 aa6.65□□□□□ -1.34
AC006065.4-202ENST00000540814 USP42Q9H9J4 1324 aaKnown RBP6.65□□□□□ -1.35
AC006065.4-202ENST00000540814 PLEKHG2Q9H7P9 1386 aa6.65□□□□□ -1.35
AC006065.4-202ENST00000540814 KCPQ6ZWJ8 1503 aa6.65□□□□□ -1.35
AC006065.4-202ENST00000540814 S1PR4O95977 384 aa6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 HSPA5P11021 654 aaKnown RBP6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 HMGB2P26583 209 aaKnown RBP6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 SLC19A1P41440 591 aa6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 CRKLP46109 303 aaKnown RBP6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 MTHFSP49914 203 aa6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 TRIM26Q12899 539 aaPredicted RBP6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 PLEKHO1Q53GL0 409 aaPredicted RBP6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 C9orf131Q5VYM1 1079 aa6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 SULT6B1Q6IMI4 303 aa6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 INTS5Q6P9B9 1019 aaKnown RBP6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 NECTIN2Q92692 538 aa6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 CCDC87Q9NVE4 849 aa6.64□□□□□ -1.35
AC006065.4-202ENST00000540814 TNFRSF10AO00220 468 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms