RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 CDC37L1Q7L3B6 337 aa11.23□□□□□ -0.61
KLHL42-203ENST00000540301 PGAP2Q9UHJ9 254 aa11.23□□□□□ -0.61
KLHL42-203ENST00000540301 MRC1P22897 1456 aa11.23□□□□□ -0.61
KLHL42-203ENST00000540301 CC2D2BQ6DHV5 1058 aa11.22□□□□□ -0.61
KLHL42-203ENST00000540301 TPTE2Q6XPS3 522 aa11.22□□□□□ -0.61
KLHL42-203ENST00000540301 NIM1KQ8IY84 436 aa11.22□□□□□ -0.61
KLHL42-203ENST00000540301 TTC5Q8N0Z6 440 aa11.22□□□□□ -0.61
KLHL42-203ENST00000540301 SNED1Q8TER0 1413 aa11.22□□□□□ -0.61
KLHL42-203ENST00000540301 ZC3H15Q8WU90 426 aaKnown RBP11.22□□□□□ -0.61
KLHL42-203ENST00000540301 CCDC102AQ96A19 550 aa11.22□□□□□ -0.61
KLHL42-203ENST00000540301 TEX13AQ9BXU3 409 aaPredicted RBP11.22□□□□□ -0.61
KLHL42-203ENST00000540301 AKAP11Q9UKA4 1901 aa11.21□□□□□ -0.61
KLHL42-203ENST00000540301 DZIP3Q86Y13 1208 aaKnown RBP11.21□□□□□ -0.61
KLHL42-203ENST00000540301 A1BGP04217 495 aa11.2□□□□□ -0.62
KLHL42-203ENST00000540301 ZNF496Q96IT1 587 aaPredicted RBP11.2□□□□□ -0.62
KLHL42-203ENST00000540301 HDAC9Q9UKV0 1011 aa11.2□□□□□ -0.62
KLHL42-203ENST00000540301 UBR2Q8IWV8 1755 aa11.2□□□□□ -0.62
KLHL42-203ENST00000540301 ZNF157P51786 506 aaPredicted RBP11.19□□□□□ -0.62
KLHL42-203ENST00000540301 HIRAP54198 1017 aaPredicted RBP11.19□□□□□ -0.62
KLHL42-203ENST00000540301 GRIPAP1Q4V328 841 aa11.19□□□□□ -0.62
KLHL42-203ENST00000540301 CLEC4GQ6UXB4 293 aa11.19□□□□□ -0.62
KLHL42-203ENST00000540301 USP48Q86UV5 1035 aa11.19□□□□□ -0.62
KLHL42-203ENST00000540301 CSRNP1Q96S65 589 aa11.19□□□□□ -0.62
KLHL42-203ENST00000540301 HEG1Q9ULI3 1381 aa11.18□□□□□ -0.62
KLHL42-203ENST00000540301 FAM177BA6PVY3 158 aa11.18□□□□□ -0.62
KLHL42-203ENST00000540301 GMPSP49915 693 aaPredicted RBP11.18□□□□□ -0.62
KLHL42-203ENST00000540301 DLK2Q6UY11 383 aa11.18□□□□□ -0.62
KLHL42-203ENST00000540301 C2orf69Q8N8R5 385 aa11.18□□□□□ -0.62
KLHL42-203ENST00000540301 GBA2Q9HCG7 927 aaPredicted RBP11.18□□□□□ -0.62
KLHL42-203ENST00000540301 ZNF652Q9Y2D9 606 aa11.18□□□□□ -0.62
KLHL42-203ENST00000540301 NPC1L1Q9UHC9 1359 aa11.17□□□□□ -0.62
KLHL42-203ENST00000540301 PPIP5K2O43314 1243 aa11.17□□□□□ -0.62
KLHL42-203ENST00000540301 GTF2E1P29083 439 aaPredicted RBP11.17□□□□□ -0.62
KLHL42-203ENST00000540301 CXCL9Q07325 125 aa11.17□□□□□ -0.62
KLHL42-203ENST00000540301 NIP7Q9Y221 180 aaKnown RBP eCLIP11.17□□□□□ -0.62
KLHL42-203ENST00000540301 AOC3Q16853 763 aa11.16□□□□□ -0.62
KLHL42-203ENST00000540301 ZNF790Q6PG37 636 aa11.16□□□□□ -0.62
KLHL42-203ENST00000540301 FBXO46Q6PJ61 603 aaPredicted RBP11.16□□□□□ -0.62
KLHL42-203ENST00000540301 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
KLHL42-203ENST00000540301 SLC17A8Q8NDX2 589 aa11.16□□□□□ -0.62
KLHL42-203ENST00000540301 TRPM4Q8TD43 1214 aa11.16□□□□□ -0.62
KLHL42-203ENST00000540301 ZNF296Q8WUU4 475 aaPredicted RBP11.16□□□□□ -0.62
KLHL42-203ENST00000540301 BCL2L13Q9BXK5 485 aa11.16□□□□□ -0.62
KLHL42-203ENST00000540301 ZNRF3Q9ULT6 936 aa11.16□□□□□ -0.62
KLHL42-203ENST00000540301 CDHR2Q9BYE9 1310 aa11.15□□□□□ -0.62
KLHL42-203ENST00000540301 SLC10A3P09131 477 aa11.15□□□□□ -0.62
KLHL42-203ENST00000540301 IL13P35225 146 aa11.15□□□□□ -0.62
KLHL42-203ENST00000540301 CRY2Q49AN0 593 aa11.15□□□□□ -0.62
KLHL42-203ENST00000540301 TCERG1O14776 1098 aaKnown RBP11.14□□□□□ -0.63
KLHL42-203ENST00000540301 PIP4K2AP48426 406 aaPredicted RBP11.14□□□□□ -0.63
KLHL42-203ENST00000540301 MTHFSDQ2M296 383 aaKnown RBP11.14□□□□□ -0.63
KLHL42-203ENST00000540301 KRT26Q7Z3Y9 468 aa11.14□□□□□ -0.63
KLHL42-203ENST00000540301 RPGRQ92834 1020 aaKnown RBP11.14□□□□□ -0.63
KLHL42-203ENST00000540301 FMNL2Q96PY5 1086 aa11.14□□□□□ -0.63
KLHL42-203ENST00000540301 VPS33BQ9H267 617 aa11.14□□□□□ -0.63
KLHL42-203ENST00000540301 CNOT7Q9UIV1 285 aaKnown RBP11.14□□□□□ -0.63
KLHL42-203ENST00000540301 COLQQ9Y215 455 aaPredicted RBP11.14□□□□□ -0.63
KLHL42-203ENST00000540301 H7C1D1 291 aa11.13□□□□□ -0.63
KLHL42-203ENST00000540301 TBC1D8O95759 1140 aa11.13□□□□□ -0.63
KLHL42-203ENST00000540301 HOXA10P31260 410 aaPredicted RBP11.13□□□□□ -0.63
KLHL42-203ENST00000540301 TNIP1Q15025 636 aa11.13□□□□□ -0.63
KLHL42-203ENST00000540301 SLC51AQ86UW1 340 aa11.13□□□□□ -0.63
KLHL42-203ENST00000540301 SHTN1A0MZ66 631 aa11.12□□□□□ -0.63
KLHL42-203ENST00000540301 PPEF1O14829 653 aaPredicted RBP11.12□□□□□ -0.63
KLHL42-203ENST00000540301 RAD17O75943 681 aa11.12□□□□□ -0.63
KLHL42-203ENST00000540301 TEFQ10587 303 aa11.12□□□□□ -0.63
KLHL42-203ENST00000540301 TMX4Q9H1E5 349 aaPredicted RBP11.12□□□□□ -0.63
KLHL42-203ENST00000540301 KIF7Q2M1P5 1343 aa11.11□□□□□ -0.63
KLHL42-203ENST00000540301 POTEFA5A3E0 1075 aa11.11□□□□□ -0.63
KLHL42-203ENST00000540301 ADM5C9JUS6 153 aa11.11□□□□□ -0.63
KLHL42-203ENST00000540301 RGL2O15211 777 aa11.11□□□□□ -0.63
KLHL42-203ENST00000540301 HMOX1P09601 288 aa11.11□□□□□ -0.63
KLHL42-203ENST00000540301 NUTM1Q86Y26 1132 aa11.11□□□□□ -0.63
KLHL42-203ENST00000540301 MICALL2Q8IY33 904 aa11.11□□□□□ -0.63
KLHL42-203ENST00000540301 SUPT20HQ8NEM7 779 aa11.11□□□□□ -0.63
KLHL42-203ENST00000540301 RBM17Q96I25 401 aaKnown RBP11.11□□□□□ -0.63
KLHL42-203ENST00000540301 CRAMP1Q96RY5 1269 aa11.11□□□□□ -0.63
KLHL42-203ENST00000540301 USP16Q9Y5T5 823 aa11.11□□□□□ -0.63
KLHL42-203ENST00000540301 ABCC12Q96J65 1359 aa11.11□□□□□ -0.63
KLHL42-203ENST00000540301 POLR2AP24928 1970 aaKnown RBP11.1□□□□□ -0.63
KLHL42-203ENST00000540301 GPR25O00155 361 aa11.1□□□□□ -0.63
KLHL42-203ENST00000540301 INTS3Q68E01 1043 aaKnown RBP11.1□□□□□ -0.63
KLHL42-203ENST00000540301 SAMD7Q7Z3H4 446 aa11.1□□□□□ -0.63
KLHL42-203ENST00000540301 RASAL3Q86YV0 1011 aa11.1□□□□□ -0.63
KLHL42-203ENST00000540301 DCPSQ96C86 337 aaKnown RBP11.1□□□□□ -0.63
KLHL42-203ENST00000540301 NYXQ9GZU5 481 aa11.1□□□□□ -0.63
KLHL42-203ENST00000540301 HLFQ16534 295 aa11.09□□□□□ -0.63
KLHL42-203ENST00000540301 NOM1Q5C9Z4 860 aaKnown RBP11.09□□□□□ -0.63
KLHL42-203ENST00000540301 IL17REQ8NFR9 667 aa11.09□□□□□ -0.63
KLHL42-203ENST00000540301 RTFDC1Q9BY42 306 aaPredicted RBP11.09□□□□□ -0.63
KLHL42-203ENST00000540301 KCNQ3O43525 872 aa11.08□□□□□ -0.64
KLHL42-203ENST00000540301 TBC1D10BQ4KMP7 808 aaPredicted RBP11.08□□□□□ -0.64
KLHL42-203ENST00000540301 MORC1Q86VD1 984 aa11.08□□□□□ -0.64
KLHL42-203ENST00000540301 ZBTB12Q9Y330 459 aaPredicted RBP11.08□□□□□ -0.64
KLHL42-203ENST00000540301 ATP6V0A2Q9Y487 856 aa11.08□□□□□ -0.64
KLHL42-203ENST00000540301 MKI67P46013 3256 aaKnown RBP11.08□□□□□ -0.64
KLHL42-203ENST00000540301 RIC1Q4ADV7 1423 aa11.08□□□□□ -0.64
KLHL42-203ENST00000540301 PRAMEF22A3QJZ6 481 aa11.07□□□□□ -0.64
KLHL42-203ENST00000540301 FKTNO75072 461 aa11.07□□□□□ -0.64
KLHL42-203ENST00000540301 KIAA2012Q0VF49 1180 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms