RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 WBP1LQ9NX94 342 aa19.82■□□□□ 0.76
USB1-203ENST00000539737 KDM3BQ7LBC6 1761 aa19.82■□□□□ 0.76
USB1-203ENST00000539737 HSPA8P11142 646 aaKnown RBP19.81■□□□□ 0.76
USB1-203ENST00000539737 EPS15P42566 896 aa19.81■□□□□ 0.76
USB1-203ENST00000539737 CTCFP49711 727 aaPredicted RBP19.81■□□□□ 0.76
USB1-203ENST00000539737 RTKN2Q8IZC4 609 aa19.81■□□□□ 0.76
USB1-203ENST00000539737 ABT1Q9ULW3 272 aaKnown RBP19.81■□□□□ 0.76
USB1-203ENST00000539737 SUSD4Q5VX71 490 aa19.8■□□□□ 0.76
USB1-203ENST00000539737 TSKSQ9UJT2 592 aa19.8■□□□□ 0.76
USB1-203ENST00000539737 NUDCQ9Y266 331 aa19.8■□□□□ 0.76
USB1-203ENST00000539737 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
USB1-203ENST00000539737 SCNN1DP51172 638 aa19.79■□□□□ 0.76
USB1-203ENST00000539737 TAF7Q15545 349 aaPredicted RBP19.79■□□□□ 0.76
USB1-203ENST00000539737 DEFB115Q30KQ5 88 aa19.79■□□□□ 0.76
USB1-203ENST00000539737 CRY2Q49AN0 593 aa19.79■□□□□ 0.76
USB1-203ENST00000539737 PAXIP1Q6ZW49 1069 aaPredicted RBP19.79■□□□□ 0.76
USB1-203ENST00000539737 PRDM10Q9NQV6 1147 aa19.79■□□□□ 0.76
USB1-203ENST00000539737 WDR33Q9C0J8 1336 aaKnown RBP19.78■□□□□ 0.76
USB1-203ENST00000539737 RASSF10A6NK89 507 aa19.78■□□□□ 0.76
USB1-203ENST00000539737 ANXA1P04083 346 aa19.78■□□□□ 0.76
USB1-203ENST00000539737 GPC2Q8N158 579 aa19.78■□□□□ 0.76
USB1-203ENST00000539737 MAP3K15Q6ZN16 1313 aa19.77■□□□□ 0.76
USB1-203ENST00000539737 ALDH1B1P30837 517 aa19.77■□□□□ 0.76
USB1-203ENST00000539737 CYP4F22Q6NT55 531 aa19.77■□□□□ 0.76
USB1-203ENST00000539737 DDX21Q9NR30 783 aaKnown RBP eCLIP19.77■□□□□ 0.76
USB1-203ENST00000539737 EIF4A1P60842 406 aaKnown RBP19.76■□□□□ 0.75
USB1-203ENST00000539737 LARGE2Q8N3Y3 721 aa19.76■□□□□ 0.75
USB1-203ENST00000539737 JDP2Q8WYK2 163 aa19.76■□□□□ 0.75
USB1-203ENST00000539737 RPGRQ92834 1020 aaKnown RBP19.76■□□□□ 0.75
USB1-203ENST00000539737 PSMD1Q99460 953 aa19.76■□□□□ 0.75
USB1-203ENST00000539737 PPEF1O14829 653 aaPredicted RBP19.75■□□□□ 0.75
USB1-203ENST00000539737 EIF6P56537 245 aaKnown RBP19.75■□□□□ 0.75
USB1-203ENST00000539737 AOC3Q16853 763 aa19.75■□□□□ 0.75
USB1-203ENST00000539737 PNMA8AQ86V59 439 aaPredicted RBP19.75■□□□□ 0.75
USB1-203ENST00000539737 AOC2O75106 756 aa19.74■□□□□ 0.75
USB1-203ENST00000539737 NTSR2O95665 410 aa19.74■□□□□ 0.75
USB1-203ENST00000539737 RALBP1Q15311 655 aa19.74■□□□□ 0.75
USB1-203ENST00000539737 PROSER3Q2NL68 480 aa19.74■□□□□ 0.75
USB1-203ENST00000539737 CST9Q5W186 159 aa19.74■□□□□ 0.75
USB1-203ENST00000539737 KIF6Q6ZMV9 814 aa19.74■□□□□ 0.75
USB1-203ENST00000539737 ABHD8Q96I13 439 aa19.74■□□□□ 0.75
USB1-203ENST00000539737 SHTN1A0MZ66 631 aa19.73■□□□□ 0.75
USB1-203ENST00000539737 DLK2Q6UY11 383 aa19.73■□□□□ 0.75
USB1-203ENST00000539737 CAPNS2Q96L46 248 aa19.73■□□□□ 0.75
USB1-203ENST00000539737 TAF1P21675 1872 aa19.73■□□□□ 0.75
USB1-203ENST00000539737 HTATSF1O43719 755 aaKnown RBP19.72■□□□□ 0.75
USB1-203ENST00000539737 LMOD1P29536 600 aaPredicted RBP19.72■□□□□ 0.75
USB1-203ENST00000539737 FAM161AQ3B820 660 aa19.72■□□□□ 0.75
USB1-203ENST00000539737 RIC1Q4ADV7 1423 aa19.72■□□□□ 0.75
USB1-203ENST00000539737 NECTIN2Q92692 538 aa19.72■□□□□ 0.75
USB1-203ENST00000539737 NYXQ9GZU5 481 aa19.72■□□□□ 0.75
USB1-203ENST00000539737 ERVV-1B6SEH8 477 aa19.71■□□□□ 0.75
USB1-203ENST00000539737 PPIP5K2O43314 1243 aa19.71■□□□□ 0.75
USB1-203ENST00000539737 HOXA10P31260 410 aaPredicted RBP19.71■□□□□ 0.75
USB1-203ENST00000539737 ZNF34Q8IZ26 560 aa19.71■□□□□ 0.75
USB1-203ENST00000539737 THSD7BQ9C0I4 1608 aa19.71■□□□□ 0.75
USB1-203ENST00000539737 TRPM7Q96QT4 1865 aa19.71■□□□□ 0.75
USB1-203ENST00000539737 LAMB2P55268 1798 aa19.7■□□□□ 0.74
USB1-203ENST00000539737 NEFMP07197 916 aa19.7■□□□□ 0.74
USB1-203ENST00000539737 RBM17Q96I25 401 aaKnown RBP19.7■□□□□ 0.74
USB1-203ENST00000539737 PLEKHF1Q96S99 279 aa19.7■□□□□ 0.74
USB1-203ENST00000539737 GLIS2Q9BZE0 524 aaPredicted RBP19.7■□□□□ 0.74
USB1-203ENST00000539737 RGL2O15211 777 aa19.69■□□□□ 0.74
USB1-203ENST00000539737 EIF2S2P20042 333 aaKnown RBP19.69■□□□□ 0.74
USB1-203ENST00000539737 NIM1KQ8IY84 436 aa19.69■□□□□ 0.74
USB1-203ENST00000539737 ABCC4O15439 1325 aa19.69■□□□□ 0.74
USB1-203ENST00000539737 HCLS1P14317 486 aaPredicted RBP19.68■□□□□ 0.74
USB1-203ENST00000539737 GMPSP49915 693 aaPredicted RBP19.68■□□□□ 0.74
USB1-203ENST00000539737 PDIA6Q15084 440 aa19.68■□□□□ 0.74
USB1-203ENST00000539737 LRP10Q7Z4F1 713 aa19.68■□□□□ 0.74
USB1-203ENST00000539737 GPR101Q96P66 508 aaPredicted RBP19.68■□□□□ 0.74
USB1-203ENST00000539737 CRAMP1Q96RY5 1269 aa19.68■□□□□ 0.74
USB1-203ENST00000539737 COL4A1P02462 1669 aa19.68■□□□□ 0.74
USB1-203ENST00000539737 CXCL9Q07325 125 aa19.67■□□□□ 0.74
USB1-203ENST00000539737 NFE2L2Q16236 605 aa19.67■□□□□ 0.74
USB1-203ENST00000539737 ZNF408Q9H9D4 720 aa19.67■□□□□ 0.74
USB1-203ENST00000539737 GPRC5DQ9NZD1 345 aa19.67■□□□□ 0.74
USB1-203ENST00000539737 MYBBP1AQ9BQG0 1328 aaKnown RBP19.67■□□□□ 0.74
USB1-203ENST00000539737 CCDC85CA6NKD9 419 aa19.66■□□□□ 0.74
USB1-203ENST00000539737 RAD17O75943 681 aa19.66■□□□□ 0.74
USB1-203ENST00000539737 MAP2K1Q02750 393 aaPredicted RBP19.66■□□□□ 0.74
USB1-203ENST00000539737 KRT24Q2M2I5 525 aa19.66■□□□□ 0.74
USB1-203ENST00000539737 GIGYF2Q6Y7W6 1299 aaKnown RBP19.66■□□□□ 0.74
USB1-203ENST00000539737 TRPM4Q8TD43 1214 aa19.66■□□□□ 0.74
USB1-203ENST00000539737 IBTKQ9P2D0 1353 aaPredicted RBP19.66■□□□□ 0.74
USB1-203ENST00000539737 CELF2O95319 508 aaKnown RBP19.65■□□□□ 0.74
USB1-203ENST00000539737 HIRAP54198 1017 aaPredicted RBP19.65■□□□□ 0.74
USB1-203ENST00000539737 AIMP1Q12904 312 aaKnown RBP19.65■□□□□ 0.74
USB1-203ENST00000539737 CC2D2BQ6DHV5 1058 aa19.65■□□□□ 0.74
USB1-203ENST00000539737 ZIC5Q96T25 663 aa19.65■□□□□ 0.74
USB1-203ENST00000539737 TSPYL4Q9UJ04 414 aa19.65■□□□□ 0.74
USB1-203ENST00000539737 TLL2Q9Y6L7 1015 aa19.65■□□□□ 0.74
USB1-203ENST00000539737 CASP8AP2Q9UKL3 1982 aa19.64■□□□□ 0.74
USB1-203ENST00000539737 USP50Q70EL3 339 aaPredicted RBP19.64■□□□□ 0.73
USB1-203ENST00000539737 PNISRQ8TF01 805 aaKnown RBP19.64■□□□□ 0.73
USB1-203ENST00000539737 ATP6V0A2Q9Y487 856 aa19.64■□□□□ 0.73
USB1-203ENST00000539737 DUOX1Q9NRD9 1551 aa19.63■□□□□ 0.73
USB1-203ENST00000539737 UTP14AQ9BVJ6 771 aaKnown RBP19.63■□□□□ 0.73
USB1-203ENST00000539737 ANKRD36CQ5JPF3 1778 aa19.62■□□□□ 0.73
USB1-203ENST00000539737 YDJCA8MPS7 323 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms