RNA–Protein interactions for RNA: ENST00000535589.3

ACTR3-208, Transcript of ARP3 actin related protein 3 homolog, humanhuman

TSL 2 BASIC

Gene ACTR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-208ENST00000535589 RTCBQ9Y3I0 505 aaKnown RBP20.48■□□□□ 0.87
ACTR3-208ENST00000535589 SCN7AQ01118 1682 aa20.48■□□□□ 0.87
ACTR3-208ENST00000535589 RAB11FIP3O75154 756 aa20.48■□□□□ 0.87
ACTR3-208ENST00000535589 HMGB2P26583 209 aaKnown RBP20.48■□□□□ 0.87
ACTR3-208ENST00000535589 ZBTB38Q8NAP3 1195 aaPredicted RBP20.48■□□□□ 0.87
ACTR3-208ENST00000535589 ZNF652Q9Y2D9 606 aa20.48■□□□□ 0.87
ACTR3-208ENST00000535589 PLSCR1O15162 318 aa20.47■□□□□ 0.87
ACTR3-208ENST00000535589 SURF6O75683 361 aaKnown RBP20.47■□□□□ 0.87
ACTR3-208ENST00000535589 HSP90AB4PQ58FF6 505 aa20.47■□□□□ 0.87
ACTR3-208ENST00000535589 CLEC4GQ6UXB4 293 aa20.47■□□□□ 0.87
ACTR3-208ENST00000535589 NOP58Q9Y2X3 529 aaKnown RBP20.47■□□□□ 0.87
ACTR3-208ENST00000535589 UBN2Q6ZU65 1347 aa20.46■□□□□ 0.87
ACTR3-208ENST00000535589 CDHR2Q9BYE9 1310 aa20.46■□□□□ 0.87
ACTR3-208ENST00000535589 FOXO4P98177 505 aa20.46■□□□□ 0.87
ACTR3-208ENST00000535589 RTL5Q5HYW3 569 aaPredicted RBP20.46■□□□□ 0.87
ACTR3-208ENST00000535589 AK7Q96M32 723 aa20.46■□□□□ 0.87
ACTR3-208ENST00000535589 LRRCC1Q9C099 1032 aa20.46■□□□□ 0.87
ACTR3-208ENST00000535589 TNS1Q9HBL0 1735 aaKnown RBP20.45■□□□□ 0.86
ACTR3-208ENST00000535589 APBB1O00213 710 aa20.45■□□□□ 0.86
ACTR3-208ENST00000535589 PARP10Q53GL7 1025 aa20.45■□□□□ 0.86
ACTR3-208ENST00000535589 NARFQ9UHQ1 456 aa20.45■□□□□ 0.86
ACTR3-208ENST00000535589 APBA3O96018 575 aa20.44■□□□□ 0.86
ACTR3-208ENST00000535589 TXNRD1Q16881 649 aa20.44■□□□□ 0.86
ACTR3-208ENST00000535589 PLA2G12BQ9BX93 195 aa20.44■□□□□ 0.86
ACTR3-208ENST00000535589 TSHZ2Q9NRE2 1034 aa20.44■□□□□ 0.86
ACTR3-208ENST00000535589 C4AP0C0L4 1744 aa20.44■□□□□ 0.86
ACTR3-208ENST00000535589 SMARCA5O60264 1052 aaPredicted RBP20.43■□□□□ 0.86
ACTR3-208ENST00000535589 LMBR1LQ6UX01 489 aa20.43■□□□□ 0.86
ACTR3-208ENST00000535589 FAM89AQ96GI7 184 aa20.43■□□□□ 0.86
ACTR3-208ENST00000535589 TRMT112Q9UI30 125 aaKnown RBP20.43■□□□□ 0.86
ACTR3-208ENST00000535589 UBR3Q6ZT12 1888 aa20.43■□□□□ 0.86
ACTR3-208ENST00000535589 RGPD3A6NKT7 1758 aaPredicted RBP20.42■□□□□ 0.86
ACTR3-208ENST00000535589 RGPD4Q7Z3J3 1758 aa20.42■□□□□ 0.86
ACTR3-208ENST00000535589 SMIM5Q71RC9 77 aa20.42■□□□□ 0.86
ACTR3-208ENST00000535589 PROM2Q8N271 834 aa20.42■□□□□ 0.86
ACTR3-208ENST00000535589 ARHGEF1Q92888 912 aaKnown RBP20.42■□□□□ 0.86
ACTR3-208ENST00000535589 KIF1BPQ96EK5 621 aa20.42■□□□□ 0.86
ACTR3-208ENST00000535589 PA2G4Q9UQ80 394 aaKnown RBP20.42■□□□□ 0.86
ACTR3-208ENST00000535589 NIP7Q9Y221 180 aaKnown RBP eCLIP20.42■□□□□ 0.86
ACTR3-208ENST00000535589 ZPR1O75312 459 aa20.41■□□□□ 0.86
ACTR3-208ENST00000535589 ADRA2BP18089 450 aa20.41■□□□□ 0.86
ACTR3-208ENST00000535589 RFX5P48382 616 aaPredicted RBP20.41■□□□□ 0.86
ACTR3-208ENST00000535589 TRAPPC3LQ5T215 181 aa20.41■□□□□ 0.86
ACTR3-208ENST00000535589 SUSD4Q5VX71 490 aa20.41■□□□□ 0.86
ACTR3-208ENST00000535589 AMIGO3Q86WK7 504 aa20.41■□□□□ 0.86
ACTR3-208ENST00000535589 ERC1Q8IUD2 1116 aa20.41■□□□□ 0.86
ACTR3-208ENST00000535589 RHPN1Q8TCX5 695 aa20.41■□□□□ 0.86
ACTR3-208ENST00000535589 COPRSQ9NQ92 184 aa20.41■□□□□ 0.86
ACTR3-208ENST00000535589 MYH3P11055 1940 aa20.4■□□□□ 0.86
ACTR3-208ENST00000535589 OS9Q13438 667 aaPredicted RBP20.4■□□□□ 0.86
ACTR3-208ENST00000535589 USPL1Q5W0Q7 1092 aa20.4■□□□□ 0.86
ACTR3-208ENST00000535589 PLEKHM2Q8IWE5 1019 aa20.4■□□□□ 0.86
ACTR3-208ENST00000535589 C16orf71Q8IYS4 520 aaPredicted RBP20.4■□□□□ 0.86
ACTR3-208ENST00000535589 UTP14AQ9BVJ6 771 aaKnown RBP20.4■□□□□ 0.86
ACTR3-208ENST00000535589 BCL2L12Q9HB09 334 aa20.4■□□□□ 0.86
ACTR3-208ENST00000535589 IRS4O14654 1257 aaPredicted RBP20.39■□□□□ 0.85
ACTR3-208ENST00000535589 G3BP1Q13283 466 aaKnown RBP eCLIP20.39■□□□□ 0.856e-7■■□□□ 12.8
ACTR3-208ENST00000535589 FAM161AQ3B820 660 aa20.39■□□□□ 0.85
ACTR3-208ENST00000535589 SRP68Q9UHB9 627 aaKnown RBP20.39■□□□□ 0.85
ACTR3-208ENST00000535589 CHMP3Q9Y3E7 222 aa20.39■□□□□ 0.85
ACTR3-208ENST00000535589 RFC4P35249 363 aa20.38■□□□□ 0.85
ACTR3-208ENST00000535589 PTPN12Q05209 780 aaKnown RBP20.38■□□□□ 0.85
ACTR3-208ENST00000535589 SYNE4Q8N205 404 aa20.38■□□□□ 0.85
ACTR3-208ENST00000535589 EP400Q96L91 3159 aa20.38■□□□□ 0.85
ACTR3-208ENST00000535589 SH3TC1Q8TE82 1336 aa20.38■□□□□ 0.85
ACTR3-208ENST00000535589 USP42Q9H9J4 1324 aaKnown RBP20.38■□□□□ 0.85
ACTR3-208ENST00000535589 PDE8AO60658 829 aa20.37■□□□□ 0.85
ACTR3-208ENST00000535589 PHF14O94880 888 aa20.37■□□□□ 0.85
ACTR3-208ENST00000535589 NTSR2O95665 410 aa20.37■□□□□ 0.85
ACTR3-208ENST00000535589 CSF1RP07333 972 aa20.37■□□□□ 0.85
ACTR3-208ENST00000535589 SSFA2P28290 1259 aa20.37■□□□□ 0.85
ACTR3-208ENST00000535589 BACH2Q9BYV9 841 aa20.37■□□□□ 0.85
ACTR3-208ENST00000535589 BCL11AQ9H165 835 aa20.37■□□□□ 0.85
ACTR3-208ENST00000535589 LAMB2P55268 1798 aa20.37■□□□□ 0.85
ACTR3-208ENST00000535589 KLHDC4Q8TBB5 520 aa20.37■□□□□ 0.85
ACTR3-208ENST00000535589 SALL3Q9BXA9 1300 aa20.36■□□□□ 0.85
ACTR3-208ENST00000535589 COL24A1Q17RW2 1714 aa20.36■□□□□ 0.85
ACTR3-208ENST00000535589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.36■□□□□ 0.85
ACTR3-208ENST00000535589 CTSWP56202 376 aa20.36■□□□□ 0.85
ACTR3-208ENST00000535589 C8orf34Q49A92 452 aa20.36■□□□□ 0.85
ACTR3-208ENST00000535589 TBC1D9BQ66K14 1250 aa20.36■□□□□ 0.85
ACTR3-208ENST00000535589 OTUD7AQ8TE49 926 aaPredicted RBP20.36■□□□□ 0.85
ACTR3-208ENST00000535589 SIL1Q9H173 461 aa20.36■□□□□ 0.85
ACTR3-208ENST00000535589 IL1RAPL2Q9NP60 686 aa20.36■□□□□ 0.85
ACTR3-208ENST00000535589 DDX60Q8IY21 1712 aaKnown RBP20.36■□□□□ 0.85
ACTR3-208ENST00000535589 FAM177BA6PVY3 158 aa20.35■□□□□ 0.85
ACTR3-208ENST00000535589 HSP90B1P14625 803 aaKnown RBP20.35■□□□□ 0.85
ACTR3-208ENST00000535589 SASH1O94885 1247 aa20.34■□□□□ 0.85
ACTR3-208ENST00000535589 CCDC57Q2TAC2 916 aa20.34■□□□□ 0.85
ACTR3-208ENST00000535589 BMP2KLQ5H9B9 411 aa20.34■□□□□ 0.85
ACTR3-208ENST00000535589 TTLL11Q8NHH1 800 aa20.34■□□□□ 0.85
ACTR3-208ENST00000535589 OSBPL3Q9H4L5 887 aa20.34■□□□□ 0.85
ACTR3-208ENST00000535589 SETDB2Q96T68 719 aa20.33■□□□□ 0.85
ACTR3-208ENST00000535589 PDE1AP54750 535 aa20.32■□□□□ 0.84
ACTR3-208ENST00000535589 BICDL1Q6ZP65 573 aa20.32■□□□□ 0.84
ACTR3-208ENST00000535589 CLASRPQ8N2M8 674 aaKnown RBP20.32■□□□□ 0.84
ACTR3-208ENST00000535589 NYXQ9GZU5 481 aa20.32■□□□□ 0.84
ACTR3-208ENST00000535589 MX1P20591 662 aa20.32■□□□□ 0.84
ACTR3-208ENST00000535589 IFIT5Q13325 482 aaKnown RBP20.32■□□□□ 0.84
ACTR3-208ENST00000535589 TTC22Q5TAA0 569 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms