RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 NPHP1O15259 732 aa16.7■□□□□ 0.26
TMEM258-202ENST00000535042 NEXNQ0ZGT2 675 aa16.7■□□□□ 0.26
TMEM258-202ENST00000535042 SLC4A10Q6U841 1118 aa16.7■□□□□ 0.26
TMEM258-202ENST00000535042 CCDC191Q8NCU4 936 aa16.7■□□□□ 0.26
TMEM258-202ENST00000535042 LINS1Q8NG48 757 aa16.7■□□□□ 0.26
TMEM258-202ENST00000535042 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
TMEM258-202ENST00000535042 BRIP1Q9BX63 1249 aa16.7■□□□□ 0.26
TMEM258-202ENST00000535042 CWC25Q9NXE8 425 aaPredicted RBP16.7■□□□□ 0.26
TMEM258-202ENST00000535042 TRMT112Q9UI30 125 aaKnown RBP16.7■□□□□ 0.26
TMEM258-202ENST00000535042 TNNQ9UQP3 1299 aa16.7■□□□□ 0.26
TMEM258-202ENST00000535042 A0A0G2JLW4 131 aa16.69■□□□□ 0.26
TMEM258-202ENST00000535042 DPEP1P16444 411 aa16.69■□□□□ 0.26
TMEM258-202ENST00000535042 GTF2E1P29083 439 aaPredicted RBP16.69■□□□□ 0.26
TMEM258-202ENST00000535042 CHRNA5P30532 468 aa16.69■□□□□ 0.26
TMEM258-202ENST00000535042 ST5P78524 1137 aa16.69■□□□□ 0.26
TMEM258-202ENST00000535042 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
TMEM258-202ENST00000535042 FAM89AQ96GI7 184 aa16.69■□□□□ 0.26
TMEM258-202ENST00000535042 RCAN3Q9UKA8 241 aa16.69■□□□□ 0.26
TMEM258-202ENST00000535042 KIF16BQ96L93 1317 aa16.69■□□□□ 0.26
TMEM258-202ENST00000535042 PXDNLA1KZ92 1463 aa16.68■□□□□ 0.26
TMEM258-202ENST00000535042 KCNA3P22001 575 aa16.68■□□□□ 0.26
TMEM258-202ENST00000535042 TGFB2P61812 414 aa16.68■□□□□ 0.26
TMEM258-202ENST00000535042 SLC10A5Q5PT55 438 aa16.68■□□□□ 0.26
TMEM258-202ENST00000535042 C3orf67Q6ZVT6 689 aa16.68■□□□□ 0.26
TMEM258-202ENST00000535042 ARHGAP45Q92619 1136 aa16.68■□□□□ 0.26
TMEM258-202ENST00000535042 FRAT1Q92837 279 aaPredicted RBP16.68■□□□□ 0.26
TMEM258-202ENST00000535042 API5Q9BZZ5 524 aaKnown RBP16.68■□□□□ 0.26
TMEM258-202ENST00000535042 SH3TC1Q8TE82 1336 aa16.68■□□□□ 0.26
TMEM258-202ENST00000535042 HCLS1P14317 486 aaPredicted RBP16.67■□□□□ 0.26
TMEM258-202ENST00000535042 GCKRQ14397 625 aa16.67■□□□□ 0.26
TMEM258-202ENST00000535042 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
TMEM258-202ENST00000535042 KIF13BQ9NQT8 1826 aa16.67■□□□□ 0.26
TMEM258-202ENST00000535042 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
TMEM258-202ENST00000535042 KLRG2A4D1S0 409 aaPredicted RBP16.66■□□□□ 0.26
TMEM258-202ENST00000535042 H7C1W4 665 aa16.66■□□□□ 0.26
TMEM258-202ENST00000535042 PCCAP05165 728 aaPredicted RBP16.66■□□□□ 0.26
TMEM258-202ENST00000535042 TRIM27P14373 513 aa16.66■□□□□ 0.26
TMEM258-202ENST00000535042 PDE6BP35913 854 aa16.66■□□□□ 0.26
TMEM258-202ENST00000535042 C2CD5Q86YS7 1000 aa16.66■□□□□ 0.26
TMEM258-202ENST00000535042 SRCIN1Q9C0H9 1055 aa16.66■□□□□ 0.26
TMEM258-202ENST00000535042 ANKRD31Q8N7Z5 1873 aa16.65■□□□□ 0.26
TMEM258-202ENST00000535042 KIAA1551Q9HCM1 1747 aa16.65■□□□□ 0.26
TMEM258-202ENST00000535042 IPO8O15397 1037 aaKnown RBP16.65■□□□□ 0.26
TMEM258-202ENST00000535042 ALDH1L1O75891 902 aa16.65■□□□□ 0.26
TMEM258-202ENST00000535042 CASP7P55210 303 aa16.65■□□□□ 0.26
TMEM258-202ENST00000535042 ZKSCAN2Q63HK3 967 aa16.65■□□□□ 0.26
TMEM258-202ENST00000535042 ATF7IPQ6VMQ6 1270 aa16.65■□□□□ 0.26
TMEM258-202ENST00000535042 WWC3Q9ULE0 1092 aa16.65■□□□□ 0.26
TMEM258-202ENST00000535042 RIC1Q4ADV7 1423 aa16.64■□□□□ 0.25
TMEM258-202ENST00000535042 IRS4O14654 1257 aaPredicted RBP16.64■□□□□ 0.25
TMEM258-202ENST00000535042 SRGNP10124 158 aa16.64■□□□□ 0.25
TMEM258-202ENST00000535042 CLUAP1Q96AJ1 413 aa16.64■□□□□ 0.25
TMEM258-202ENST00000535042 TNRC6CQ9HCJ0 1690 aaKnown RBP16.64■□□□□ 0.25
TMEM258-202ENST00000535042 ABCC4O15439 1325 aa16.64■□□□□ 0.25
TMEM258-202ENST00000535042 H0YIN7 160 aa16.63■□□□□ 0.25
TMEM258-202ENST00000535042 CRY2Q49AN0 593 aa16.63■□□□□ 0.25
TMEM258-202ENST00000535042 UBE3BQ7Z3V4 1068 aa16.63■□□□□ 0.25
TMEM258-202ENST00000535042 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
TMEM258-202ENST00000535042 CDHR2Q9BYE9 1310 aa16.63■□□□□ 0.25
TMEM258-202ENST00000535042 NLRP3Q96P20 1036 aa16.62■□□□□ 0.25
TMEM258-202ENST00000535042 SRCAPQ6ZRS2 3230 aa16.62■□□□□ 0.25
TMEM258-202ENST00000535042 GRM8O00222 908 aa16.61■□□□□ 0.25
TMEM258-202ENST00000535042 PLIN1O60240 522 aa16.61■□□□□ 0.25
TMEM258-202ENST00000535042 RLBP1P12271 317 aa16.61■□□□□ 0.25
TMEM258-202ENST00000535042 CCT4P50991 539 aaKnown RBP16.61■□□□□ 0.25
TMEM258-202ENST00000535042 INTS3Q68E01 1043 aaKnown RBP16.61■□□□□ 0.25
TMEM258-202ENST00000535042 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.25
TMEM258-202ENST00000535042 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
TMEM258-202ENST00000535042 N4BP2Q86UW6 1770 aaPredicted RBP16.61■□□□□ 0.25
TMEM258-202ENST00000535042 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
TMEM258-202ENST00000535042 NBPF7P0C2Y1 421 aaPredicted RBP16.6■□□□□ 0.25
TMEM258-202ENST00000535042 NPR1P16066 1061 aa16.6■□□□□ 0.25
TMEM258-202ENST00000535042 STYK1Q6J9G0 422 aa16.6■□□□□ 0.25
TMEM258-202ENST00000535042 MASTLQ96GX5 879 aa16.6■□□□□ 0.25
TMEM258-202ENST00000535042 USP44Q9H0E7 712 aa16.6■□□□□ 0.25
TMEM258-202ENST00000535042 C9orf78Q9NZ63 289 aaPredicted RBP16.6■□□□□ 0.25
TMEM258-202ENST00000535042 PIM2Q9P1W9 311 aa16.6■□□□□ 0.25
TMEM258-202ENST00000535042 PDE8AO60658 829 aa16.59■□□□□ 0.25
TMEM258-202ENST00000535042 YBX3P16989 372 aaKnown RBP eCLIP16.59■□□□□ 0.256e-35■□□□□ 10.3
TMEM258-202ENST00000535042 HOXA10P31260 410 aaPredicted RBP16.59■□□□□ 0.25
TMEM258-202ENST00000535042 SF3B3Q15393 1217 aaKnown RBP16.59■□□□□ 0.25
TMEM258-202ENST00000535042 DZIP1LQ8IYY4 767 aaKnown RBP16.59■□□□□ 0.25
TMEM258-202ENST00000535042 TMEM57Q8N5G2 664 aa16.59■□□□□ 0.25
TMEM258-202ENST00000535042 UTYO14607 1347 aa16.59■□□□□ 0.25
TMEM258-202ENST00000535042 DDX60Q8IY21 1712 aaKnown RBP16.59■□□□□ 0.25
TMEM258-202ENST00000535042 EPHA10Q5JZY3 1008 aa16.58■□□□□ 0.24
TMEM258-202ENST00000535042 PANK1Q8TE04 598 aa16.58■□□□□ 0.24
TMEM258-202ENST00000535042 KAZALD1Q96I82 304 aa16.58■□□□□ 0.24
TMEM258-202ENST00000535042 PLA2G12BQ9BX93 195 aa16.58■□□□□ 0.24
TMEM258-202ENST00000535042 BCS1LQ9Y276 419 aa16.58■□□□□ 0.24
TMEM258-202ENST00000535042 FOXO4P98177 505 aa16.57■□□□□ 0.24
TMEM258-202ENST00000535042 DALRD3Q5D0E6 543 aaKnown RBP16.57■□□□□ 0.24
TMEM258-202ENST00000535042 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
TMEM258-202ENST00000535042 TTLL6Q8N841 843 aa16.57■□□□□ 0.24
TMEM258-202ENST00000535042 RPGRQ92834 1020 aaKnown RBP16.57■□□□□ 0.24
TMEM258-202ENST00000535042 SUCLG2Q96I99 432 aa16.57■□□□□ 0.24
TMEM258-202ENST00000535042 CCDC85AQ96PX6 553 aaPredicted RBP16.57■□□□□ 0.24
TMEM258-202ENST00000535042 CTSWP56202 376 aa16.56■□□□□ 0.24
TMEM258-202ENST00000535042 SLC51AQ86UW1 340 aa16.56■□□□□ 0.24
TMEM258-202ENST00000535042 TTLL11Q8NHH1 800 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms