RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 FNBP4Q8N3X1 1017 aaPredicted RBP7.3□□□□□ -1.24
USP48-215ENST00000534705 DTWD1Q8N5C7 304 aa7.3□□□□□ -1.24
USP48-215ENST00000534705 SLC6A14Q9UN76 642 aa7.3□□□□□ -1.24
USP48-215ENST00000534705 GTF3C3Q9Y5Q9 886 aa7.3□□□□□ -1.24
USP48-215ENST00000534705 COL17A1Q9UMD9 1497 aaPredicted RBP7.3□□□□□ -1.24
USP48-215ENST00000534705 NUDT8Q8WV74 236 aa7.29□□□□□ -1.24
USP48-215ENST00000534705 AFF1P51825 1210 aaKnown RBP7.28□□□□□ -1.24
USP48-215ENST00000534705 HIRAP54198 1017 aaPredicted RBP7.28□□□□□ -1.24
USP48-215ENST00000534705 PSMA6P60900 246 aaKnown RBP7.28□□□□□ -1.24
USP48-215ENST00000534705 TBC1D8BQ0IIM8 1120 aa7.28□□□□□ -1.24
USP48-215ENST00000534705 DMRTC2Q8IXT2 367 aaPredicted RBP7.28□□□□□ -1.24
USP48-215ENST00000534705 CLUAP1Q96AJ1 413 aa7.28□□□□□ -1.24
USP48-215ENST00000534705 IGFLR1Q9H665 355 aa7.28□□□□□ -1.24
USP48-215ENST00000534705 RGS9O75916 674 aaPredicted RBP7.27□□□□□ -1.25
USP48-215ENST00000534705 SKIP12755 728 aa7.27□□□□□ -1.25
USP48-215ENST00000534705 YBX3P16989 372 aaKnown RBP eCLIP7.27□□□□□ -1.255e-9■□□□□ 9.1
USP48-215ENST00000534705 TYRO3Q06418 890 aa7.27□□□□□ -1.25
USP48-215ENST00000534705 PCSK7Q16549 785 aa7.27□□□□□ -1.25
USP48-215ENST00000534705 HIF1AQ16665 826 aa7.27□□□□□ -1.25
USP48-215ENST00000534705 ILDR2Q71H61 639 aa7.27□□□□□ -1.25
USP48-215ENST00000534705 TNS4Q8IZW8 715 aa7.27□□□□□ -1.25
USP48-215ENST00000534705 WFDC12Q8WWY7 111 aa7.27□□□□□ -1.25
USP48-215ENST00000534705 ALG2Q9H553 416 aa7.27□□□□□ -1.25
USP48-215ENST00000534705 PCMTD2Q9NV79 361 aa7.27□□□□□ -1.25
USP48-215ENST00000534705 TBCELQ5QJ74 424 aa7.26□□□□□ -1.25
USP48-215ENST00000534705 PSAPL1Q6NUJ1 521 aa7.26□□□□□ -1.25
USP48-215ENST00000534705 NFATC2IPQ8NCF5 419 aa7.26□□□□□ -1.25
USP48-215ENST00000534705 SUSD3Q96L08 255 aa7.26□□□□□ -1.25
USP48-215ENST00000534705 IREB2P48200 963 aaKnown RBP7.25□□□□□ -1.25
USP48-215ENST00000534705 SH3PXD2AQ5TCZ1 1133 aa7.25□□□□□ -1.25
USP48-215ENST00000534705 MSL1Q68DK7 614 aa7.25□□□□□ -1.25
USP48-215ENST00000534705 FBXO11Q86XK2 927 aa7.25□□□□□ -1.25
USP48-215ENST00000534705 TRIM50Q86XT4 487 aa7.25□□□□□ -1.25
USP48-215ENST00000534705 HSH2DQ96JZ2 352 aa7.25□□□□□ -1.25
USP48-215ENST00000534705 PHACTR1Q9C0D0 580 aa7.25□□□□□ -1.25
USP48-215ENST00000534705 HCN4Q9Y3Q4 1203 aa7.25□□□□□ -1.25
USP48-215ENST00000534705 PIK3CDO00329 1044 aa7.24□□□□□ -1.25
USP48-215ENST00000534705 COBLO75128 1261 aa7.24□□□□□ -1.25
USP48-215ENST00000534705 POTEAQ6S8J7 498 aa7.24□□□□□ -1.25
USP48-215ENST00000534705 IGF2-ASQ6U949 168 aa7.24□□□□□ -1.25
USP48-215ENST00000534705 PRR23CQ6ZRP0 262 aa7.24□□□□□ -1.25
USP48-215ENST00000534705 PNMA5Q96PV4 448 aa7.24□□□□□ -1.25
USP48-215ENST00000534705 FMNL2Q96PY5 1086 aa7.24□□□□□ -1.25
USP48-215ENST00000534705 DNAJB12Q9NXW2 375 aaKnown RBP7.24□□□□□ -1.25
USP48-215ENST00000534705 POM121CA8CG34 1229 aa7.23□□□□□ -1.25
USP48-215ENST00000534705 NCOA4Q13772 614 aa7.23□□□□□ -1.25
USP48-215ENST00000534705 ZNF280CQ8ND82 737 aa7.23□□□□□ -1.25
USP48-215ENST00000534705 FRRS1LQ9P0K9 344 aa7.23□□□□□ -1.25
USP48-215ENST00000534705 NOS3P29474 1203 aa7.22□□□□□ -1.25
USP48-215ENST00000534705 BTLAQ7Z6A9 289 aa7.22□□□□□ -1.25
USP48-215ENST00000534705 ADAMTS19Q8TE59 1207 aa7.22□□□□□ -1.25
USP48-215ENST00000534705 GSX2Q9BZM3 304 aa7.22□□□□□ -1.25
USP48-215ENST00000534705 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.22□□□□□ -1.25
USP48-215ENST00000534705 ATP1A2P50993 1020 aa7.21□□□□□ -1.26
USP48-215ENST00000534705 IRAK1P51617 712 aa7.21□□□□□ -1.26
USP48-215ENST00000534705 CCINQ13939 588 aa7.21□□□□□ -1.26
USP48-215ENST00000534705 M0R2N6 131 aa7.2□□□□□ -1.26
USP48-215ENST00000534705 TSPAN10Q9H1Z9 355 aaPredicted RBP7.2□□□□□ -1.26
USP48-215ENST00000534705 FSTP19883 344 aa7.19□□□□□ -1.26
USP48-215ENST00000534705 ERICH6Q7L0X2 663 aa7.19□□□□□ -1.26
USP48-215ENST00000534705 FAM35AQ86V20 835 aa7.19□□□□□ -1.26
USP48-215ENST00000534705 WFDC8Q8IUA0 241 aa7.19□□□□□ -1.26
USP48-215ENST00000534705 TPCN2Q8NHX9 752 aa7.19□□□□□ -1.26
USP48-215ENST00000534705 TTC9Q92623 222 aa7.19□□□□□ -1.26
USP48-215ENST00000534705 GLMNQ92990 594 aa7.19□□□□□ -1.26
USP48-215ENST00000534705 MEGF10Q96KG7 1140 aa7.19□□□□□ -1.26
USP48-215ENST00000534705 ZMYND15Q9H091 742 aa7.19□□□□□ -1.26
USP48-215ENST00000534705 NAGPAQ9UK23 515 aa7.19□□□□□ -1.26
USP48-215ENST00000534705 ZBTB7BO15156 539 aaPredicted RBP7.18□□□□□ -1.26
USP48-215ENST00000534705 SSTR4P31391 388 aa7.18□□□□□ -1.26
USP48-215ENST00000534705 HDGFL1Q5TGJ6 251 aa7.18□□□□□ -1.26
USP48-215ENST00000534705 IER5Q5VY09 327 aa7.18□□□□□ -1.26
USP48-215ENST00000534705 CCDC102BQ68D86 513 aa7.18□□□□□ -1.26
USP48-215ENST00000534705 ALDH16A1Q8IZ83 802 aa7.18□□□□□ -1.26
USP48-215ENST00000534705 USP17L5A8MUK1 530 aa7.17□□□□□ -1.26
USP48-215ENST00000534705 PPP1R12BO60237 982 aaPredicted RBP7.17□□□□□ -1.26
USP48-215ENST00000534705 EPB42P16452 691 aa7.17□□□□□ -1.26
USP48-215ENST00000534705 NFKB1P19838 968 aa7.17□□□□□ -1.26
USP48-215ENST00000534705 GRIK5Q16478 980 aa7.17□□□□□ -1.26
USP48-215ENST00000534705 PLEKHM2Q8IWE5 1019 aa7.17□□□□□ -1.26
USP48-215ENST00000534705 DZIP1LQ8IYY4 767 aaKnown RBP7.17□□□□□ -1.26
USP48-215ENST00000534705 STAG2Q8N3U4 1231 aa7.17□□□□□ -1.26
USP48-215ENST00000534705 GAS2L2Q8NHY3 880 aa7.17□□□□□ -1.26
USP48-215ENST00000534705 UCN2Q96RP3 112 aa7.17□□□□□ -1.26
USP48-215ENST00000534705 GSC2O15499 205 aa7.16□□□□□ -1.26
USP48-215ENST00000534705 PTCD1O75127 700 aaKnown RBP7.16□□□□□ -1.26
USP48-215ENST00000534705 MAP3K6O95382 1288 aa7.16□□□□□ -1.26
USP48-215ENST00000534705 CPB1P15086 417 aa7.16□□□□□ -1.26
USP48-215ENST00000534705 CD97P48960 835 aa7.16□□□□□ -1.26
USP48-215ENST00000534705 ELMSAN1Q6PJG2 1045 aa7.16□□□□□ -1.26
USP48-215ENST00000534705 DEPDC4Q8N2C3 294 aa7.16□□□□□ -1.26
USP48-215ENST00000534705 TMEM130Q8N3G9 435 aa7.16□□□□□ -1.26
USP48-215ENST00000534705 DCAF11Q8TEB1 546 aa7.16□□□□□ -1.26
USP48-215ENST00000534705 LPIN3Q9BQK8 851 aa7.16□□□□□ -1.26
USP48-215ENST00000534705 AKTIPQ9H8T0 292 aa7.16□□□□□ -1.26
USP48-215ENST00000534705 RBM19Q9Y4C8 960 aaKnown RBP7.16□□□□□ -1.26
USP48-215ENST00000534705 ATP9BO43861 1147 aa7.15□□□□□ -1.26
USP48-215ENST00000534705 ARID4AP29374 1257 aaPredicted RBP7.15□□□□□ -1.26
USP48-215ENST00000534705 LARGE2Q8N3Y3 721 aa7.15□□□□□ -1.26
USP48-215ENST00000534705 MRPL18Q9H0U6 180 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms