RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 TNRC6CQ9HCJ0 1690 aaKnown RBP27.51■■□□□ 1.99
PKP3-211ENST00000534401 SLX4Q8IY92 1834 aa27.51■■□□□ 1.99
PKP3-211ENST00000534401 UTP14AQ9BVJ6 771 aaKnown RBP27.5■■□□□ 1.99
PKP3-211ENST00000534401 ADCY9O60503 1353 aa27.49■■□□□ 1.99
PKP3-211ENST00000534401 NPR1P16066 1061 aa27.49■■□□□ 1.99
PKP3-211ENST00000534401 CNKSR1Q969H4 720 aa27.49■■□□□ 1.99
PKP3-211ENST00000534401 GTF2E1P29083 439 aaPredicted RBP27.48■■□□□ 1.99
PKP3-211ENST00000534401 ZNF622Q969S3 477 aaKnown RBP eCLIP27.48■■□□□ 1.99
PKP3-211ENST00000534401 SBF1O95248 1867 aa27.48■■□□□ 1.99
PKP3-211ENST00000534401 ARHGAP27Q6ZUM4 889 aa27.47■■□□□ 1.99
PKP3-211ENST00000534401 TRMT2AQ8IZ69 625 aaKnown RBP27.47■■□□□ 1.99
PKP3-211ENST00000534401 C7orf43Q8WVR3 580 aa27.47■■□□□ 1.99
PKP3-211ENST00000534401 STK31Q9BXU1 1019 aa27.47■■□□□ 1.99
PKP3-211ENST00000534401 HOXA10P31260 410 aaPredicted RBP27.46■■□□□ 1.99
PKP3-211ENST00000534401 SLFN5Q08AF3 891 aa27.46■■□□□ 1.99
PKP3-211ENST00000534401 E9PSI1 815 aa27.45■■□□□ 1.98
PKP3-211ENST00000534401 SLC4A2P04920 1241 aa27.45■■□□□ 1.98
PKP3-211ENST00000534401 G2E3Q7L622 706 aa27.45■■□□□ 1.98
PKP3-211ENST00000534401 RIC3Q7Z5B4 369 aa27.45■■□□□ 1.98
PKP3-211ENST00000534401 FER1L6Q2WGJ9 1857 aa27.44■■□□□ 1.98
PKP3-211ENST00000534401 DDX58O95786 925 aaKnown RBP27.44■■□□□ 1.98
PKP3-211ENST00000534401 KSR2Q6VAB6 950 aa27.44■■□□□ 1.98
PKP3-211ENST00000534401 ZNF784Q8NCA9 323 aaPredicted RBP27.44■■□□□ 1.98
PKP3-211ENST00000534401 METTL22Q9BUU2 404 aaPredicted RBP27.44■■□□□ 1.98
PKP3-211ENST00000534401 TCERG1O14776 1098 aaKnown RBP27.43■■□□□ 1.98
PKP3-211ENST00000534401 PRPF40BQ6NWY9 871 aaKnown RBP27.43■■□□□ 1.98
PKP3-211ENST00000534401 CACNA1SQ13698 1873 aa27.42■■□□□ 1.98
PKP3-211ENST00000534401 ATP5J2-PTCD1G3V325 749 aa27.42■■□□□ 1.98
PKP3-211ENST00000534401 C3orf67Q6ZVT6 689 aa27.42■■□□□ 1.98
PKP3-211ENST00000534401 SYNE4Q8N205 404 aa27.42■■□□□ 1.98
PKP3-211ENST00000534401 TRMT112Q9UI30 125 aaKnown RBP27.42■■□□□ 1.98
PKP3-211ENST00000534401 LAMB2P55268 1798 aa27.42■■□□□ 1.98
PKP3-211ENST00000534401 SH3TC1Q8TE82 1336 aa27.41■■□□□ 1.98
PKP3-211ENST00000534401 PI4KAP2A4QPH2 592 aa27.4■■□□□ 1.98
PKP3-211ENST00000534401 ALDH1B1P30837 517 aa27.4■■□□□ 1.98
PKP3-211ENST00000534401 PI4KAP1Q8N8J0 262 aa27.4■■□□□ 1.98
PKP3-211ENST00000534401 CCDC191Q8NCU4 936 aa27.4■■□□□ 1.98
PKP3-211ENST00000534401 CRAMP1Q96RY5 1269 aa27.4■■□□□ 1.98
PKP3-211ENST00000534401 DDX60Q8IY21 1712 aaKnown RBP27.39■■□□□ 1.98
PKP3-211ENST00000534401 NFKBIEO00221 500 aa27.39■■□□□ 1.98
PKP3-211ENST00000534401 FLIIQ13045 1269 aa27.39■■□□□ 1.98
PKP3-211ENST00000534401 NLRP3Q96P20 1036 aa27.39■■□□□ 1.98
PKP3-211ENST00000534401 MAP3K2Q9Y2U5 619 aa27.39■■□□□ 1.98
PKP3-211ENST00000534401 C21orf2O43822 256 aa27.38■■□□□ 1.97
PKP3-211ENST00000534401 CDCA7LQ96GN5 454 aa27.38■■□□□ 1.97
PKP3-211ENST00000534401 LTBP3Q9NS15 1303 aa27.38■■□□□ 1.97
PKP3-211ENST00000534401 PRELPP51888 382 aa27.37■■□□□ 1.97
PKP3-211ENST00000534401 SOGA3Q5TF21 947 aa27.37■■□□□ 1.97
PKP3-211ENST00000534401 SNED1Q8TER0 1413 aa27.37■■□□□ 1.97
PKP3-211ENST00000534401 MYD88Q99836 296 aa27.37■■□□□ 1.97
PKP3-211ENST00000534401 CCDC88AQ3V6T2 1871 aa27.36■■□□□ 1.97
PKP3-211ENST00000534401 IGKV5-2P06315 115 aa27.36■■□□□ 1.97
PKP3-211ENST00000534401 HCLS1P14317 486 aaPredicted RBP27.36■■□□□ 1.97
PKP3-211ENST00000534401 C9orf131Q5VYM1 1079 aa27.35■■□□□ 1.97
PKP3-211ENST00000534401 ZBTB38Q8NAP3 1195 aaPredicted RBP27.35■■□□□ 1.97
PKP3-211ENST00000534401 FAM89AQ96GI7 184 aa27.35■■□□□ 1.97
PKP3-211ENST00000534401 PCCAP05165 728 aaPredicted RBP27.34■■□□□ 1.97
PKP3-211ENST00000534401 SF3B3Q15393 1217 aaKnown RBP27.34■■□□□ 1.97
PKP3-211ENST00000534401 RPGRQ92834 1020 aaKnown RBP27.34■■□□□ 1.97
PKP3-211ENST00000534401 DICER1Q9UPY3 1922 aaKnown RBP27.33■■□□□ 1.97
PKP3-211ENST00000534401 RASSF7Q02833 373 aa27.33■■□□□ 1.97
PKP3-211ENST00000534401 ZNF428Q96B54 188 aa27.33■■□□□ 1.97
PKP3-211ENST00000534401 RBM17Q96I25 401 aaKnown RBP27.33■■□□□ 1.97
PKP3-211ENST00000534401 CWC25Q9NXE8 425 aaPredicted RBP27.33■■□□□ 1.97
PKP3-211ENST00000534401 LMNB1P20700 586 aa27.32■■□□□ 1.96
PKP3-211ENST00000534401 NEURL1BA8MQ27 555 aa27.3■■□□□ 1.96
PKP3-211ENST00000534401 FKBP5Q13451 457 aaPredicted RBP27.3■■□□□ 1.96
PKP3-211ENST00000534401 CCDC93Q567U6 631 aa27.3■■□□□ 1.96
PKP3-211ENST00000534401 CC2D2BQ6DHV5 1058 aa27.3■■□□□ 1.96
PKP3-211ENST00000534401 DNAAF4Q8WXU2 420 aa27.3■■□□□ 1.96
PKP3-211ENST00000534401 ZNF219Q9P2Y4 722 aaPredicted RBP27.3■■□□□ 1.96
PKP3-211ENST00000534401 ZC3H4Q9UPT8 1303 aaKnown RBP27.3■■□□□ 1.96
PKP3-211ENST00000534401 IRS4O14654 1257 aaPredicted RBP27.29■■□□□ 1.96
PKP3-211ENST00000534401 NEXNQ0ZGT2 675 aa27.29■■□□□ 1.96
PKP3-211ENST00000534401 RNF181Q9P0P0 153 aa27.29■■□□□ 1.96
PKP3-211ENST00000534401 CDHR2Q9BYE9 1310 aa27.29■■□□□ 1.96
PKP3-211ENST00000534401 ABCC4O15439 1325 aa27.28■■□□□ 1.96
PKP3-211ENST00000534401 CT47B1P0C2W7 299 aaPredicted RBP27.28■■□□□ 1.96
PKP3-211ENST00000534401 RTKN2Q8IZC4 609 aa27.28■■□□□ 1.96
PKP3-211ENST00000534401 GRIPAP1Q4V328 841 aa27.27■■□□□ 1.96
PKP3-211ENST00000534401 OLFM4Q6UX06 510 aa27.27■■□□□ 1.96
PKP3-211ENST00000534401 MRPL50Q8N5N7 158 aaKnown RBP27.27■■□□□ 1.96
PKP3-211ENST00000534401 LINS1Q8NG48 757 aa27.27■■□□□ 1.96
PKP3-211ENST00000534401 TAOK3Q9H2K8 898 aa27.27■■□□□ 1.96
PKP3-211ENST00000534401 TAF1P21675 1872 aa27.27■■□□□ 1.96
PKP3-211ENST00000534401 H7C1W4 665 aa27.26■■□□□ 1.95
PKP3-211ENST00000534401 BBOX1O75936 387 aa27.26■■□□□ 1.95
PKP3-211ENST00000534401 HSP90B1P14625 803 aaKnown RBP27.26■■□□□ 1.95
PKP3-211ENST00000534401 CWF19L2Q2TBE0 894 aaKnown RBP27.26■■□□□ 1.95
PKP3-211ENST00000534401 FKBP4Q02790 459 aaKnown RBP eCLIP27.25■■□□□ 1.95
PKP3-211ENST00000534401 ALDH1L2Q3SY69 923 aa27.25■■□□□ 1.95
PKP3-211ENST00000534401 PSMD1Q99460 953 aa27.25■■□□□ 1.95
PKP3-211ENST00000534401 GRAPQ13588 217 aa27.24■■□□□ 1.95
PKP3-211ENST00000534401 GCKRQ14397 625 aa27.24■■□□□ 1.95
PKP3-211ENST00000534401 RTL5Q5HYW3 569 aaPredicted RBP27.24■■□□□ 1.95
PKP3-211ENST00000534401 BEND3Q5T5X7 828 aa27.24■■□□□ 1.95
PKP3-211ENST00000534401 DDX46Q7L014 1031 aaKnown RBP27.24■■□□□ 1.95
PKP3-211ENST00000534401 GRAPLQ8TC17 118 aaPredicted RBP27.24■■□□□ 1.95
PKP3-211ENST00000534401 SSH1Q8WYL5 1049 aa27.24■■□□□ 1.95
PKP3-211ENST00000534401 ATP6V0A2Q9Y487 856 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms