RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 ITGA6P23229 1130 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 USP5P45974 858 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 MFAP1P55081 439 aaKnown RBP4.46□□□□□ -1.7
CSDE1-216ENST00000534389 PDE3BQ13370 1112 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 LBRQ14739 615 aaKnown RBP4.46□□□□□ -1.7
CSDE1-216ENST00000534389 SV2AQ7L0J3 742 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 BTLAQ7Z6A9 289 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 ATCAYQ86WG3 371 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 TRIM22Q8IYM9 498 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 ZNF295-AS1Q8N0V1 137 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 ZNF280CQ8ND82 737 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 SLC16A10Q8TF71 515 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 GTPBP3Q969Y2 492 aaKnown RBP4.46□□□□□ -1.7
CSDE1-216ENST00000534389 ZNF775Q96BV0 537 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-216ENST00000534389 GMCL1Q96IK5 515 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 CRISPLD1Q9H336 500 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 PRR12Q9ULL5 1215 aa4.46□□□□□ -1.7
CSDE1-216ENST00000534389 UBAP1LF5GYI3 381 aa4.45□□□□□ -1.7
CSDE1-216ENST00000534389 H3BM21 787 aa4.45□□□□□ -1.7
CSDE1-216ENST00000534389 ETFBKMTQ8IXQ9 262 aa4.45□□□□□ -1.7
CSDE1-216ENST00000534389 VWA5B2Q8N398 1253 aa4.45□□□□□ -1.7
CSDE1-216ENST00000534389 PKNOX2Q96KN3 472 aa4.45□□□□□ -1.7
CSDE1-216ENST00000534389 ZCCHC2Q9C0B9 1178 aaKnown RBP4.45□□□□□ -1.7
CSDE1-216ENST00000534389 DCTN4Q9UJW0 460 aa4.45□□□□□ -1.7
CSDE1-216ENST00000534389 NSFL1CQ9UNZ2 370 aaKnown RBP4.45□□□□□ -1.7
CSDE1-216ENST00000534389 PCDHGC4Q9Y5F7 938 aa4.45□□□□□ -1.7
CSDE1-216ENST00000534389 TNFRSF10BO14763 440 aa4.44□□□□□ -1.7
CSDE1-216ENST00000534389 NEFLP07196 543 aa4.44□□□□□ -1.7
CSDE1-216ENST00000534389 MZF1P28698 734 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-216ENST00000534389 TBC1D8BQ0IIM8 1120 aa4.44□□□□□ -1.7
CSDE1-216ENST00000534389 NFX1Q12986 1120 aaKnown RBP4.44□□□□□ -1.7
CSDE1-216ENST00000534389 IER5Q5VY09 327 aa4.44□□□□□ -1.7
CSDE1-216ENST00000534389 KRT25Q7Z3Z0 450 aa4.44□□□□□ -1.7
CSDE1-216ENST00000534389 ZNF438Q7Z4V0 828 aa4.44□□□□□ -1.7
CSDE1-216ENST00000534389 NPAS3Q8IXF0 933 aa4.44□□□□□ -1.7
CSDE1-216ENST00000534389 NUDT16Q96DE0 195 aaKnown RBP4.44□□□□□ -1.7
CSDE1-216ENST00000534389 ABHD17AQ96GS6 310 aa4.44□□□□□ -1.7
CSDE1-216ENST00000534389 IGFLR1Q9H665 355 aa4.44□□□□□ -1.7
CSDE1-216ENST00000534389 CUEDC1Q9NWM3 386 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-216ENST00000534389 POLIQ9UNA4 740 aa4.44□□□□□ -1.7
CSDE1-216ENST00000534389 KCNH4Q9UQ05 1017 aa4.44□□□□□ -1.7
CSDE1-216ENST00000534389 RTCBQ9Y3I0 505 aaKnown RBP4.44□□□□□ -1.7
CSDE1-216ENST00000534389 GPR25O00155 361 aa4.43□□□□□ -1.7
CSDE1-216ENST00000534389 XYLBO75191 536 aa4.43□□□□□ -1.7
CSDE1-216ENST00000534389 ATP2B2Q01814 1243 aa4.43□□□□□ -1.7
CSDE1-216ENST00000534389 EHHADHQ08426 723 aa4.43□□□□□ -1.7
CSDE1-216ENST00000534389 DBN1Q16643 649 aa4.43□□□□□ -1.7
CSDE1-216ENST00000534389 TTC39BQ5VTQ0 682 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-216ENST00000534389 POTEAQ6S8J7 498 aa4.43□□□□□ -1.7
CSDE1-216ENST00000534389 ZNF837Q96EG3 531 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-216ENST00000534389 MARK1Q9P0L2 795 aa4.43□□□□□ -1.7
CSDE1-216ENST00000534389 ATXN7L1Q9ULK2 861 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-216ENST00000534389 USP20Q9Y2K6 914 aa4.43□□□□□ -1.7
CSDE1-216ENST00000534389 ERBB4Q15303 1308 aa4.43□□□□□ -1.7
CSDE1-216ENST00000534389 ZBTB39O15060 712 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 WFS1O76024 890 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 PDGFAP04085 211 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 MAPTP10636 758 aaKnown RBP4.42□□□□□ -1.7
CSDE1-216ENST00000534389 BMP4P12644 408 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 CD33P20138 364 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 MX2P20592 715 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 FGFR3P22607 806 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 MAPK8P45983 427 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 WRNQ14191 1432 aaPredicted RBP eCLIP4.42□□□□□ -1.7
CSDE1-216ENST00000534389 LCE2CQ5TA81 110 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 SAMD5Q5TGI4 173 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 BHMTQ93088 406 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 DMRTB1Q96MA1 342 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 CITED4Q96RK1 184 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 CCDC87Q9NVE4 849 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 BCS1LQ9Y276 419 aa4.42□□□□□ -1.7
CSDE1-216ENST00000534389 ANKRD33BA6NCL7 494 aa4.41□□□□□ -1.7
CSDE1-216ENST00000534389 PHF20L1A8MW92 1017 aa4.41□□□□□ -1.7
CSDE1-216ENST00000534389 THBS1P07996 1170 aa4.41□□□□□ -1.7
CSDE1-216ENST00000534389 FAM157BP0CG42 384 aa4.41□□□□□ -1.7
CSDE1-216ENST00000534389 RARAP10276 462 aa4.41□□□□□ -1.7
CSDE1-216ENST00000534389 ERCC3P19447 782 aa4.41□□□□□ -1.7
CSDE1-216ENST00000534389 ARHGAP4P98171 946 aa4.41□□□□□ -1.7
CSDE1-216ENST00000534389 PLCB3Q01970 1234 aa4.41□□□□□ -1.7
CSDE1-216ENST00000534389 TYRO3Q06418 890 aa4.41□□□□□ -1.7
CSDE1-216ENST00000534389 CCINQ13939 588 aa4.41□□□□□ -1.7
CSDE1-216ENST00000534389 TREML4Q6UXN2 200 aa4.41□□□□□ -1.7
CSDE1-216ENST00000534389 RAB44Q7Z6P3 723 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-216ENST00000534389 IRF7Q92985 503 aa4.41□□□□□ -1.7
CSDE1-216ENST00000534389 FAM177BA6PVY3 158 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 BNIP3LO60238 219 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 FZD6O60353 706 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 PHACTR2O75167 634 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 SASH3O75995 380 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 PSAPP07602 524 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 VSIG8P0DPA2 414 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 NPR3P17342 541 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 INPP5BP32019 993 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 FGD1P98174 961 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 TNP2Q05952 138 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 SPEM2Q0P670 501 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 SFSWAPQ12872 951 aaKnown RBP4.4□□□□□ -1.71
CSDE1-216ENST00000534389 LAMC2Q13753 1193 aa4.4□□□□□ -1.71
CSDE1-216ENST00000534389 EAPPQ56P03 285 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-216ENST00000534389 ZNF326Q5BKZ1 582 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms