RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 HMOX1P09601 288 aa13.94□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 RGMBQ6NW40 437 aa13.94□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 CDC37L1Q7L3B6 337 aa13.94□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 NIP7Q9Y221 180 aaKnown RBP eCLIP13.94□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 FAM155AB1AL88 458 aaPredicted RBP13.93□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 GMPSP49915 693 aaPredicted RBP13.93□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 ZNF157P51786 506 aaPredicted RBP13.93□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 HIRAP54198 1017 aaPredicted RBP13.93□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 MTHFSDQ2M296 383 aaKnown RBP13.93□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 TEX13AQ9BXU3 409 aaPredicted RBP13.93□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 HEG1Q9ULI3 1381 aa13.93□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 MRC1P22897 1456 aa13.93□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 PPIP5K2O43314 1243 aa13.92□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 FXR1P51114 621 aaKnown RBP eCLIP13.92□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 AOC3Q16853 763 aa13.92□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 BCORQ6W2J9 1755 aa13.91□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 A0A0C4DFX4 3053 aa13.91□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 IL13P35225 146 aa13.91□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 CXCL9Q07325 125 aa13.91□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 ZNF790Q6PG37 636 aa13.91□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 TRPM4Q8TD43 1214 aa13.91□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 BCL2L13Q9BXK5 485 aa13.91□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 HDAC9Q9UKV0 1011 aa13.91□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 ZNF652Q9Y2D9 606 aa13.91□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 SNED1Q8TER0 1413 aa13.9□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 SHTN1A0MZ66 631 aa13.9□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 DLL1O00548 723 aa13.9□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 CCDC102AQ96A19 550 aa13.9□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 CSRNP1Q96S65 589 aa13.9□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 PGAP2Q9UHJ9 254 aa13.9□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 NPC1L1Q9UHC9 1359 aa13.9□□□□□ -0.18
NEDD8-MDP1-202ENST00000534348 RAD17O75943 681 aa13.89□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 TEFQ10587 303 aa13.89□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 CC2D2BQ6DHV5 1058 aa13.89□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 CLEC4GQ6UXB4 293 aa13.89□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 NUTM1Q86Y26 1132 aa13.89□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 C2orf69Q8N8R5 385 aa13.89□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 RPGRQ92834 1020 aaKnown RBP13.89□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 GBA2Q9HCG7 927 aaPredicted RBP13.89□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 SZT2Q5T011 3432 aa13.88□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 KCNQ3O43525 872 aa13.88□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 MORC1Q86VD1 984 aa13.88□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 ZC3H15Q8WU90 426 aaKnown RBP13.88□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 FMNL2Q96PY5 1086 aa13.88□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 USP16Q9Y5T5 823 aa13.88□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 UBR2Q8IWV8 1755 aa13.88□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 PRAMEF22A3QJZ6 481 aa13.87□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 PKN2Q16513 984 aaKnown RBP13.87□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 ZNRF3Q9ULT6 936 aa13.87□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 ADM5C9JUS6 153 aa13.86□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 PPEF1O14829 653 aaPredicted RBP13.86□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 TBC1D8O95759 1140 aa13.86□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 HLFQ16534 295 aa13.86□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 KRT26Q7Z3Y9 468 aa13.86□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 ZNF296Q8WUU4 475 aaPredicted RBP13.86□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 CNOT7Q9UIV1 285 aaKnown RBP13.86□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 ABCC12Q96J65 1359 aa13.85□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 CRY2Q49AN0 593 aa13.85□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 SAMD7Q7Z3H4 446 aa13.85□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 IL17REQ8NFR9 667 aa13.85□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 H7C1D1 291 aa13.84□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 SLC10A3P09131 477 aa13.84□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 RBM26Q5T8P6 1007 aaKnown RBP13.84□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 MICALL2Q8IY33 904 aa13.84□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 TMX4Q9H1E5 349 aaPredicted RBP13.84□□□□□ -0.19
NEDD8-MDP1-202ENST00000534348 TBC1D10BQ4KMP7 808 aaPredicted RBP13.83□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 GRIPAP1Q4V328 841 aa13.83□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 PANK3Q9H999 370 aa13.83□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 AKAP11Q9UKA4 1901 aa13.83□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 CENPFP49454 3210 aa13.83□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 TNIP1Q15025 636 aa13.82□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 FBXO46Q6PJ61 603 aaPredicted RBP13.82□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 NGEFQ8N5V2 710 aa13.82□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 SLC17A8Q8NDX2 589 aa13.82□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 RBM17Q96I25 401 aaKnown RBP13.82□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 COLQQ9Y215 455 aaPredicted RBP13.82□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 EGFRP00533 1210 aa13.81□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 HOXA10P31260 410 aaPredicted RBP13.81□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 DCPSQ96C86 337 aaKnown RBP13.81□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 GNAT3A8MTJ3 354 aa13.8□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 NBPF26B4DH59 902 aa13.8□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 GPTP24298 496 aa13.8□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 NBPF10Q6P3W6 841 aaKnown RBP13.8□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 C3orf67Q6ZVT6 689 aa13.8□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 NYXQ9GZU5 481 aa13.8□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 HTTP42858 3142 aa13.79□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 DPP8Q6V1X1 898 aaPredicted RBP13.79□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 RASAL3Q86YV0 1011 aa13.79□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 SUPT20HQ8NEM7 779 aa13.79□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 CRAMP1Q96RY5 1269 aa13.79□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 CDHR2Q9BYE9 1310 aa13.79□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 YDJCA8MPS7 323 aa13.78□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 GPR25O00155 361 aa13.78□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 VPS33BQ9H267 617 aa13.78□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 ATP6V0A2Q9Y487 856 aa13.78□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 BRCA2P51587 3418 aa13.77□□□□□ -0.2
NEDD8-MDP1-202ENST00000534348 SNRPA1P09661 255 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms