RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 C8orf58Q8NAV2 365 aa14.09□□□□□ -0.15
SDHD-208ENST00000534010 ISCA1Q9BUE6 129 aa14.09□□□□□ -0.15
SDHD-208ENST00000534010 PCNTO95613 3336 aa14.09□□□□□ -0.15
SDHD-208ENST00000534010 ANP32CO43423 234 aa14.08□□□□□ -0.16
SDHD-208ENST00000534010 GPTP24298 496 aa14.08□□□□□ -0.16
SDHD-208ENST00000534010 SOGA3Q5TF21 947 aa14.08□□□□□ -0.16
SDHD-208ENST00000534010 PLBD2Q8NHP8 589 aa14.08□□□□□ -0.16
SDHD-208ENST00000534010 NMRK2Q9NPI5 230 aa14.08□□□□□ -0.16
SDHD-208ENST00000534010 POTECB2RU33 542 aa14.07□□□□□ -0.16
SDHD-208ENST00000534010 HSP90AB3PQ58FF7 597 aa14.07□□□□□ -0.16
SDHD-208ENST00000534010 CRAMP1Q96RY5 1269 aa14.07□□□□□ -0.16
SDHD-208ENST00000534010 MRS2Q9HD23 443 aa14.07□□□□□ -0.16
SDHD-208ENST00000534010 HYPKQ9NX55 129 aa14.07□□□□□ -0.16
SDHD-208ENST00000534010 LAS1LQ9Y4W2 734 aaKnown RBP14.07□□□□□ -0.16
SDHD-208ENST00000534010 TAF1P21675 1872 aa14.07□□□□□ -0.16
SDHD-208ENST00000534010 COL4A1P02462 1669 aa14.07□□□□□ -0.16
SDHD-208ENST00000534010 COL4A5P29400 1685 aa14.07□□□□□ -0.16
SDHD-208ENST00000534010 LTBP1Q14766 1721 aa14.07□□□□□ -0.16
SDHD-208ENST00000534010 GLTPD2A6NH11 291 aa14.06□□□□□ -0.16
SDHD-208ENST00000534010 ALDH1B1P30837 517 aa14.06□□□□□ -0.16
SDHD-208ENST00000534010 PPP1R42Q7Z4L9 355 aa14.06□□□□□ -0.16
SDHD-208ENST00000534010 TSPYL6Q8N831 410 aa14.06□□□□□ -0.16
SDHD-208ENST00000534010 NECTIN2Q92692 538 aa14.06□□□□□ -0.16
SDHD-208ENST00000534010 ZNF521Q96K83 1311 aa14.06□□□□□ -0.16
SDHD-208ENST00000534010 FAM177BA6PVY3 158 aa14.05□□□□□ -0.16
SDHD-208ENST00000534010 TOMM70O94826 608 aa14.05□□□□□ -0.16
SDHD-208ENST00000534010 CCDC93Q567U6 631 aa14.05□□□□□ -0.16
SDHD-208ENST00000534010 OLFM4Q6UX06 510 aa14.05□□□□□ -0.16
SDHD-208ENST00000534010 ANKRD13DQ6ZTN6 518 aa14.05□□□□□ -0.16
SDHD-208ENST00000534010 ZNF526Q8TF50 670 aaPredicted RBP14.05□□□□□ -0.16
SDHD-208ENST00000534010 PSMD1Q99460 953 aa14.05□□□□□ -0.16
SDHD-208ENST00000534010 UTP14AQ9BVJ6 771 aaKnown RBP14.05□□□□□ -0.16
SDHD-208ENST00000534010 TAOK3Q9H2K8 898 aa14.05□□□□□ -0.16
SDHD-208ENST00000534010 SCN4AP35499 1836 aa14.05□□□□□ -0.16
SDHD-208ENST00000534010 FKBP4Q02790 459 aaKnown RBP eCLIP14.04□□□□□ -0.16
SDHD-208ENST00000534010 WDR63Q8IWG1 891 aa14.04□□□□□ -0.16
SDHD-208ENST00000534010 SYNE4Q8N205 404 aa14.04□□□□□ -0.16
SDHD-208ENST00000534010 DUOX1Q9NRD9 1551 aa14.04□□□□□ -0.16
SDHD-208ENST00000534010 ADAMTSL1Q8N6G6 1762 aa14.04□□□□□ -0.16
SDHD-208ENST00000534010 AIMP1Q12904 312 aaKnown RBP14.03□□□□□ -0.16
SDHD-208ENST00000534010 CC2D2BQ6DHV5 1058 aa14.03□□□□□ -0.16
SDHD-208ENST00000534010 SLC51AQ86UW1 340 aa14.03□□□□□ -0.16
SDHD-208ENST00000534010 RTKN2Q8IZC4 609 aa14.03□□□□□ -0.16
SDHD-208ENST00000534010 RBM46Q8TBY0 533 aaKnown RBP14.03□□□□□ -0.16
SDHD-208ENST00000534010 PHAXQ9H814 394 aaKnown RBP14.03□□□□□ -0.16
SDHD-208ENST00000534010 KDM2BQ8NHM5 1336 aa14.03□□□□□ -0.16
SDHD-208ENST00000534010 NPHP1O15259 732 aa14.02□□□□□ -0.17
SDHD-208ENST00000534010 TSR2Q969E8 191 aaKnown RBP14.02□□□□□ -0.17
SDHD-208ENST00000534010 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
SDHD-208ENST00000534010 ABCC4O15439 1325 aa14.01□□□□□ -0.17
SDHD-208ENST00000534010 SH3TC1Q8TE82 1336 aa14.01□□□□□ -0.17
SDHD-208ENST00000534010 FANCIQ9NVI1 1328 aa14.01□□□□□ -0.17
SDHD-208ENST00000534010 HSPA6P17066 643 aa14.01□□□□□ -0.17
SDHD-208ENST00000534010 GTF2E1P29083 439 aaPredicted RBP14.01□□□□□ -0.17
SDHD-208ENST00000534010 SF3B3Q15393 1217 aaKnown RBP14.01□□□□□ -0.17
SDHD-208ENST00000534010 GRIPAP1Q4V328 841 aa14.01□□□□□ -0.17
SDHD-208ENST00000534010 L3MBTL3Q96JM7 780 aaPredicted RBP14.01□□□□□ -0.17
SDHD-208ENST00000534010 NLRP3Q96P20 1036 aa14.01□□□□□ -0.17
SDHD-208ENST00000534010 RTFDC1Q9BY42 306 aaPredicted RBP14.01□□□□□ -0.17
SDHD-208ENST00000534010 MYH3P11055 1940 aa14.01□□□□□ -0.17
SDHD-208ENST00000534010 FZD9O00144 591 aa14□□□□□ -0.17
SDHD-208ENST00000534010 ELL2O00472 640 aaPredicted RBP14□□□□□ -0.17
SDHD-208ENST00000534010 CCDC30Q5VVM6 783 aa14□□□□□ -0.17
SDHD-208ENST00000534010 CHMP4AQ9BY43 222 aa14□□□□□ -0.17
SDHD-208ENST00000534010 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
SDHD-208ENST00000534010 HCLS1P14317 486 aaPredicted RBP13.99□□□□□ -0.17
SDHD-208ENST00000534010 RBM17Q96I25 401 aaKnown RBP13.99□□□□□ -0.17
SDHD-208ENST00000534010 RRAGCQ9HB90 399 aa13.99□□□□□ -0.17
SDHD-208ENST00000534010 TRMT112Q9UI30 125 aaKnown RBP13.99□□□□□ -0.17
SDHD-208ENST00000534010 ATP6V0A2Q9Y487 856 aa13.99□□□□□ -0.17
SDHD-208ENST00000534010 VAMP4O75379 141 aa13.98□□□□□ -0.17
SDHD-208ENST00000534010 VEGFAP15692 232 aaPredicted RBP13.98□□□□□ -0.17
SDHD-208ENST00000534010 FSTL1Q12841 308 aa13.98□□□□□ -0.17
SDHD-208ENST00000534010 TWISTNBQ3B726 338 aaPredicted RBP13.98□□□□□ -0.17
SDHD-208ENST00000534010 CCDC191Q8NCU4 936 aa13.98□□□□□ -0.17
SDHD-208ENST00000534010 RPGRQ92834 1020 aaKnown RBP13.98□□□□□ -0.17
SDHD-208ENST00000534010 METTL22Q9BUU2 404 aaPredicted RBP13.98□□□□□ -0.17
SDHD-208ENST00000534010 SENP3-EIF4A1A0A087X0R7 540 aa13.97□□□□□ -0.17
SDHD-208ENST00000534010 ATP5J2-PTCD1G3V325 749 aa13.97□□□□□ -0.17
SDHD-208ENST00000534010 PPEF1O14829 653 aaPredicted RBP13.97□□□□□ -0.17
SDHD-208ENST00000534010 BBOX1O75936 387 aa13.97□□□□□ -0.17
SDHD-208ENST00000534010 IGKV5-2P06315 115 aa13.97□□□□□ -0.17
SDHD-208ENST00000534010 IARSP41252 1262 aaKnown RBP13.97□□□□□ -0.17
SDHD-208ENST00000534010 SP8Q8IXZ3 490 aa13.97□□□□□ -0.17
SDHD-208ENST00000534010 ZBTB38Q8NAP3 1195 aaPredicted RBP13.97□□□□□ -0.17
SDHD-208ENST00000534010 FAM89AQ96GI7 184 aa13.97□□□□□ -0.17
SDHD-208ENST00000534010 VPS33BQ9H267 617 aa13.97□□□□□ -0.17
SDHD-208ENST00000534010 ZNF277Q9NRM2 450 aaPredicted RBP13.97□□□□□ -0.17
SDHD-208ENST00000534010 ZNF541Q9H0D2 1346 aa13.96□□□□□ -0.17
SDHD-208ENST00000534010 PCCAP05165 728 aaPredicted RBP13.96□□□□□ -0.17
SDHD-208ENST00000534010 GOLGA2Q08379 1002 aa13.96□□□□□ -0.17
SDHD-208ENST00000534010 GRAPQ13588 217 aa13.96□□□□□ -0.17
SDHD-208ENST00000534010 KSR2Q6VAB6 950 aa13.96□□□□□ -0.17
SDHD-208ENST00000534010 G2E3Q7L622 706 aa13.96□□□□□ -0.17
SDHD-208ENST00000534010 DNAJC5GQ8N7S2 189 aa13.96□□□□□ -0.17
SDHD-208ENST00000534010 GRAPLQ8TC17 118 aaPredicted RBP13.96□□□□□ -0.17
SDHD-208ENST00000534010 CDHR2Q9BYE9 1310 aa13.95□□□□□ -0.18
SDHD-208ENST00000534010 DDNO94850 711 aaPredicted RBP13.95□□□□□ -0.18
SDHD-208ENST00000534010 DPY19L2Q6NUT2 758 aa13.95□□□□□ -0.18
SDHD-208ENST00000534010 TMC4Q7Z404 712 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms