RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 TCIRG1Q13488 830 aa16.96■□□□□ 0.31
TRAPPC4-214ENST00000533632 MVPQ14764 893 aaKnown RBP16.96■□□□□ 0.31
TRAPPC4-214ENST00000533632 ITPRIPQ8IWB1 547 aa16.96■□□□□ 0.31
TRAPPC4-214ENST00000533632 ANKRD31Q8N7Z5 1873 aa16.96■□□□□ 0.31
TRAPPC4-214ENST00000533632 UBN2Q6ZU65 1347 aa16.96■□□□□ 0.3
TRAPPC4-214ENST00000533632 NEURL1BA8MQ27 555 aa16.95■□□□□ 0.3
TRAPPC4-214ENST00000533632 MS4A1P11836 297 aa16.95■□□□□ 0.3
TRAPPC4-214ENST00000533632 LINS1Q8NG48 757 aa16.95■□□□□ 0.3
TRAPPC4-214ENST00000533632 EXOC6Q8TAG9 804 aa16.95■□□□□ 0.3
TRAPPC4-214ENST00000533632 ISCA1Q9BUE6 129 aa16.95■□□□□ 0.3
TRAPPC4-214ENST00000533632 GPTP24298 496 aa16.94■□□□□ 0.3
TRAPPC4-214ENST00000533632 CCT4P50991 539 aaKnown RBP16.94■□□□□ 0.3
TRAPPC4-214ENST00000533632 BICDL1Q6ZP65 573 aa16.94■□□□□ 0.3
TRAPPC4-214ENST00000533632 CCDC136Q96JN2 1154 aa16.94■□□□□ 0.3
TRAPPC4-214ENST00000533632 SRCIN1Q9C0H9 1055 aa16.94■□□□□ 0.3
TRAPPC4-214ENST00000533632 C10orf71Q711Q0 1435 aa16.94■□□□□ 0.3
TRAPPC4-214ENST00000533632 ZNF34Q8IZ26 560 aa16.94■□□□□ 0.3
TRAPPC4-214ENST00000533632 FHDC1Q9C0D6 1143 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC4-214ENST00000533632 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
TRAPPC4-214ENST00000533632 CARMIL3Q8ND23 1372 aa16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 AAMPQ13685 434 aa16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 PPP1R1BQ9UD71 204 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 ZNF652Q9Y2D9 606 aa16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 PARP3Q9Y6F1 533 aa16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 SERPINB2P05120 415 aa16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 TRIM28Q13263 835 aaKnown RBP16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 GCKRQ14397 625 aa16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 B4GALNT3Q6L9W6 998 aa16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 NLRP10Q86W26 655 aa16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 MEIS3Q99687 375 aa16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 USP44Q9H0E7 712 aa16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 UTRNP46939 3433 aa16.92■□□□□ 0.3
TRAPPC4-214ENST00000533632 BRCA1P38398 1863 aaKnown RBP16.91■□□□□ 0.3
TRAPPC4-214ENST00000533632 ZBTB7BO15156 539 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC4-214ENST00000533632 HSP90AB3PQ58FF7 597 aa16.91■□□□□ 0.3
TRAPPC4-214ENST00000533632 SYT17Q9BSW7 474 aa16.91■□□□□ 0.3
TRAPPC4-214ENST00000533632 NIP7Q9Y221 180 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRAPPC4-214ENST00000533632 IBTKQ9P2D0 1353 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC4-214ENST00000533632 NBPF7P0C2Y1 421 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC4-214ENST00000533632 JARID2Q92833 1246 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC4-214ENST00000533632 SETDB2Q96T68 719 aa16.9■□□□□ 0.3
TRAPPC4-214ENST00000533632 SUSD4Q5VX71 490 aa16.89■□□□□ 0.3
TRAPPC4-214ENST00000533632 PRR5LQ6MZQ0 368 aa16.89■□□□□ 0.3
TRAPPC4-214ENST00000533632 CCDC191Q8NCU4 936 aa16.89■□□□□ 0.3
TRAPPC4-214ENST00000533632 NLGN2Q8NFZ4 835 aa16.89■□□□□ 0.3
TRAPPC4-214ENST00000533632 CWC25Q9NXE8 425 aaPredicted RBP16.89■□□□□ 0.3
TRAPPC4-214ENST00000533632 DDX19BQ9UMR2 479 aa16.89■□□□□ 0.3
TRAPPC4-214ENST00000533632 TNRC6CQ9HCJ0 1690 aaKnown RBP16.89■□□□□ 0.29
TRAPPC4-214ENST00000533632 COL11A2P13942 1736 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC4-214ENST00000533632 DLEC1Q9Y238 1755 aa16.89■□□□□ 0.29
TRAPPC4-214ENST00000533632 CD2APQ9Y5K6 639 aa16.89■□□□□ 0.29
TRAPPC4-214ENST00000533632 DDX60Q8IY21 1712 aaKnown RBP16.88■□□□□ 0.29
TRAPPC4-214ENST00000533632 GRM8O00222 908 aa16.88■□□□□ 0.29
TRAPPC4-214ENST00000533632 CASP7P55210 303 aa16.88■□□□□ 0.29
TRAPPC4-214ENST00000533632 SYNE4Q8N205 404 aa16.88■□□□□ 0.29
TRAPPC4-214ENST00000533632 ZBTB40Q9NUA8 1239 aa16.88■□□□□ 0.29
TRAPPC4-214ENST00000533632 UTYO14607 1347 aa16.88■□□□□ 0.29
TRAPPC4-214ENST00000533632 FAM177BA6PVY3 158 aa16.87■□□□□ 0.29
TRAPPC4-214ENST00000533632 NTSR2O95665 410 aa16.87■□□□□ 0.29
TRAPPC4-214ENST00000533632 RTL5Q5HYW3 569 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC4-214ENST00000533632 CCDC24Q8N4L8 307 aa16.87■□□□□ 0.29
TRAPPC4-214ENST00000533632 LAMB2P55268 1798 aa16.87■□□□□ 0.29
TRAPPC4-214ENST00000533632 H7C1W4 665 aa16.87■□□□□ 0.29
TRAPPC4-214ENST00000533632 UBE3BQ7Z3V4 1068 aa16.87■□□□□ 0.29
TRAPPC4-214ENST00000533632 KLHL34Q8N239 644 aa16.87■□□□□ 0.29
TRAPPC4-214ENST00000533632 C1orf115Q9H7X2 142 aa16.87■□□□□ 0.29
TRAPPC4-214ENST00000533632 PARP10Q53GL7 1025 aa16.86■□□□□ 0.29
TRAPPC4-214ENST00000533632 FAM89AQ96GI7 184 aa16.86■□□□□ 0.29
TRAPPC4-214ENST00000533632 KAZALD1Q96I82 304 aa16.86■□□□□ 0.29
TRAPPC4-214ENST00000533632 C9orf78Q9NZ63 289 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC4-214ENST00000533632 ABCC12Q96J65 1359 aa16.86■□□□□ 0.29
TRAPPC4-214ENST00000533632 PCCAP05165 728 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC4-214ENST00000533632 NBPF5PQ86XG9 351 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC4-214ENST00000533632 NUTM1Q86Y26 1132 aa16.84■□□□□ 0.29
TRAPPC4-214ENST00000533632 CNBD1Q8NA66 436 aa16.84■□□□□ 0.29
TRAPPC4-214ENST00000533632 ZBTB38Q8NAP3 1195 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC4-214ENST00000533632 TRMT112Q9UI30 125 aaKnown RBP16.84■□□□□ 0.29
TRAPPC4-214ENST00000533632 MYH3P11055 1940 aa16.84■□□□□ 0.29
TRAPPC4-214ENST00000533632 UBTFL1P0CB47 393 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC4-214ENST00000533632 KCNA3P22001 575 aa16.84■□□□□ 0.29
TRAPPC4-214ENST00000533632 SUCLG2Q96I99 432 aa16.84■□□□□ 0.29
TRAPPC4-214ENST00000533632 UTP14AQ9BVJ6 771 aaKnown RBP16.84■□□□□ 0.29
TRAPPC4-214ENST00000533632 LRRFIP2Q9Y608 721 aaKnown RBP16.84■□□□□ 0.29
TRAPPC4-214ENST00000533632 EPHA10Q5JZY3 1008 aa16.83■□□□□ 0.28
TRAPPC4-214ENST00000533632 GNAI3P08754 354 aa16.82■□□□□ 0.28
TRAPPC4-214ENST00000533632 ERFEQ4G0M1 354 aa16.82■□□□□ 0.28
TRAPPC4-214ENST00000533632 TPTE2Q6XPS3 522 aa16.82■□□□□ 0.28
TRAPPC4-214ENST00000533632 PPP1R42Q7Z4L9 355 aa16.82■□□□□ 0.28
TRAPPC4-214ENST00000533632 PCDHB15Q9Y5E8 787 aa16.82■□□□□ 0.28
TRAPPC4-214ENST00000533632 RIC1Q4ADV7 1423 aa16.82■□□□□ 0.28
TRAPPC4-214ENST00000533632 SH3TC1Q8TE82 1336 aa16.82■□□□□ 0.28
TRAPPC4-214ENST00000533632 CDHR2Q9BYE9 1310 aa16.82■□□□□ 0.28
TRAPPC4-214ENST00000533632 CHRNA5P30532 468 aa16.82■□□□□ 0.28
TRAPPC4-214ENST00000533632 TGFB2P61812 414 aa16.82■□□□□ 0.28
TRAPPC4-214ENST00000533632 CACNA1SQ13698 1873 aa16.81■□□□□ 0.28
TRAPPC4-214ENST00000533632 A0A0G2JLW4 131 aa16.81■□□□□ 0.28
TRAPPC4-214ENST00000533632 DPEP1P16444 411 aa16.81■□□□□ 0.28
TRAPPC4-214ENST00000533632 BRIP1Q9BX63 1249 aa16.81■□□□□ 0.28
TRAPPC4-214ENST00000533632 KLRG2A4D1S0 409 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms