RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 PCNTO95613 3336 aa17.31■□□□□ 0.36
COPB1-209ENST00000533096 TRAF5O00463 557 aa17.3■□□□□ 0.36
COPB1-209ENST00000533096 NEFMP07197 916 aa17.3■□□□□ 0.36
COPB1-209ENST00000533096 CC2D2BQ6DHV5 1058 aa17.3■□□□□ 0.36
COPB1-209ENST00000533096 PSMD1Q99460 953 aa17.3■□□□□ 0.36
COPB1-209ENST00000533096 BEGAINQ9BUH8 593 aa17.3■□□□□ 0.36
COPB1-209ENST00000533096 TMX4Q9H1E5 349 aaPredicted RBP17.3■□□□□ 0.36
COPB1-209ENST00000533096 NPC1L1Q9UHC9 1359 aa17.29■□□□□ 0.36
COPB1-209ENST00000533096 CYP4F22Q6NT55 531 aa17.29■□□□□ 0.36
COPB1-209ENST00000533096 ABHD8Q96I13 439 aa17.29■□□□□ 0.36
COPB1-209ENST00000533096 CAPNS2Q96L46 248 aa17.29■□□□□ 0.36
COPB1-209ENST00000533096 GPR101Q96P66 508 aaPredicted RBP17.29■□□□□ 0.36
COPB1-209ENST00000533096 UBR2Q8IWV8 1755 aa17.29■□□□□ 0.36
COPB1-209ENST00000533096 COL11A2P13942 1736 aaPredicted RBP17.28■□□□□ 0.36
COPB1-209ENST00000533096 CCDC85CA6NKD9 419 aa17.28■□□□□ 0.36
COPB1-209ENST00000533096 ERVV-1B6SEH8 477 aa17.28■□□□□ 0.36
COPB1-209ENST00000533096 NIM1KQ8IY84 436 aa17.28■□□□□ 0.36
COPB1-209ENST00000533096 THUMPD2Q9BTF0 503 aaKnown RBP17.28■□□□□ 0.36
COPB1-209ENST00000533096 TSKSQ9UJT2 592 aa17.28■□□□□ 0.36
COPB1-209ENST00000533096 MAP3K15Q6ZN16 1313 aa17.27■□□□□ 0.36
COPB1-209ENST00000533096 FER1L6Q2WGJ9 1857 aa17.27■□□□□ 0.36
COPB1-209ENST00000533096 PPEF1O14829 653 aaPredicted RBP17.27■□□□□ 0.36
COPB1-209ENST00000533096 RGL2O15211 777 aa17.27■□□□□ 0.36
COPB1-209ENST00000533096 SCNN1DP51172 638 aa17.27■□□□□ 0.36
COPB1-209ENST00000533096 CRY2Q49AN0 593 aa17.27■□□□□ 0.36
COPB1-209ENST00000533096 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.36
COPB1-209ENST00000533096 PNISRQ8TF01 805 aaKnown RBP17.27■□□□□ 0.36
COPB1-209ENST00000533096 PPIP5K2O43314 1243 aa17.26■□□□□ 0.35
COPB1-209ENST00000533096 HOXA10P31260 410 aaPredicted RBP17.26■□□□□ 0.35
COPB1-209ENST00000533096 ECE1P42892 770 aa17.26■□□□□ 0.35
COPB1-209ENST00000533096 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
COPB1-209ENST00000533096 CST9Q5W186 159 aa17.26■□□□□ 0.35
COPB1-209ENST00000533096 ABCC12Q96J65 1359 aa17.26■□□□□ 0.35
COPB1-209ENST00000533096 AOC2O75106 756 aa17.25■□□□□ 0.35
COPB1-209ENST00000533096 EIF2S2P20042 333 aaKnown RBP17.25■□□□□ 0.35
COPB1-209ENST00000533096 AOC3Q16853 763 aa17.25■□□□□ 0.35
COPB1-209ENST00000533096 FAM161AQ3B820 660 aa17.25■□□□□ 0.35
COPB1-209ENST00000533096 USP50Q70EL3 339 aaPredicted RBP17.25■□□□□ 0.35
COPB1-209ENST00000533096 CFAP44Q96MT7 982 aa17.25■□□□□ 0.35
COPB1-209ENST00000533096 NLRP3Q96P20 1036 aa17.25■□□□□ 0.35
COPB1-209ENST00000533096 CRAMP1Q96RY5 1269 aa17.25■□□□□ 0.35
COPB1-209ENST00000533096 SCN7AQ01118 1682 aa17.25■□□□□ 0.35
COPB1-209ENST00000533096 PPP1R42Q7Z4L9 355 aa17.24■□□□□ 0.35
COPB1-209ENST00000533096 ZNF428Q96B54 188 aa17.24■□□□□ 0.35
COPB1-209ENST00000533096 UBN2Q6ZU65 1347 aa17.23■□□□□ 0.35
COPB1-209ENST00000533096 GRIPAP1Q4V328 841 aa17.23■□□□□ 0.35
COPB1-209ENST00000533096 ZNF34Q8IZ26 560 aa17.23■□□□□ 0.35
COPB1-209ENST00000533096 ZNF408Q9H9D4 720 aa17.23■□□□□ 0.35
COPB1-209ENST00000533096 CELF2O95319 508 aaKnown RBP17.22■□□□□ 0.35
COPB1-209ENST00000533096 CXCL9Q07325 125 aa17.22■□□□□ 0.35
COPB1-209ENST00000533096 BCL2L13Q9BXK5 485 aa17.22■□□□□ 0.35
COPB1-209ENST00000533096 RAD17O75943 681 aa17.21■□□□□ 0.35
COPB1-209ENST00000533096 NTSR2O95665 410 aa17.21■□□□□ 0.35
COPB1-209ENST00000533096 ANXA1P04083 346 aa17.21■□□□□ 0.35
COPB1-209ENST00000533096 GMPSP49915 693 aaPredicted RBP17.21■□□□□ 0.35
COPB1-209ENST00000533096 GIGYF2Q6Y7W6 1299 aaKnown RBP17.21■□□□□ 0.35
COPB1-209ENST00000533096 NECTIN2Q92692 538 aa17.21■□□□□ 0.35
COPB1-209ENST00000533096 UTP14AQ9BVJ6 771 aaKnown RBP17.21■□□□□ 0.35
COPB1-209ENST00000533096 GLIS2Q9BZE0 524 aaPredicted RBP17.21■□□□□ 0.35
COPB1-209ENST00000533096 ADARB2Q9NS39 739 aaKnown RBP17.21■□□□□ 0.35
COPB1-209ENST00000533096 GPRC5DQ9NZD1 345 aa17.21■□□□□ 0.35
COPB1-209ENST00000533096 ZNRF3Q9ULT6 936 aa17.21■□□□□ 0.35
COPB1-209ENST00000533096 ATP6V0A2Q9Y487 856 aa17.21■□□□□ 0.35
COPB1-209ENST00000533096 AIMP1Q12904 312 aaKnown RBP17.2■□□□□ 0.34
COPB1-209ENST00000533096 DPP8Q6V1X1 898 aaPredicted RBP17.2■□□□□ 0.34
COPB1-209ENST00000533096 TLL2Q9Y6L7 1015 aa17.2■□□□□ 0.34
COPB1-209ENST00000533096 DICER1Q9UPY3 1922 aaKnown RBP17.19■□□□□ 0.34
COPB1-209ENST00000533096 HCLS1P14317 486 aaPredicted RBP17.19■□□□□ 0.34
COPB1-209ENST00000533096 NFE2L2Q16236 605 aa17.19■□□□□ 0.34
COPB1-209ENST00000533096 MPNDQ8N594 471 aa17.19■□□□□ 0.34
COPB1-209ENST00000533096 SUPT20HQ8NEM7 779 aa17.19■□□□□ 0.34
COPB1-209ENST00000533096 TSPYL4Q9UJ04 414 aa17.19■□□□□ 0.34
COPB1-209ENST00000533096 MAP2K2P36507 400 aa17.18■□□□□ 0.34
COPB1-209ENST00000533096 MLLT1Q03111 559 aaPredicted RBP17.18■□□□□ 0.34
COPB1-209ENST00000533096 PARP10Q53GL7 1025 aa17.18■□□□□ 0.34
COPB1-209ENST00000533096 CIAPIN1Q6FI81 312 aa17.18■□□□□ 0.34
COPB1-209ENST00000533096 VIRMAQ69YN4 1812 aaKnown RBP17.18■□□□□ 0.34
COPB1-209ENST00000533096 COL4A5P29400 1685 aa17.17■□□□□ 0.34
COPB1-209ENST00000533096 SCN4AP35499 1836 aa17.17■□□□□ 0.34
COPB1-209ENST00000533096 BBOX1O75936 387 aa17.17■□□□□ 0.34
COPB1-209ENST00000533096 SLC10A5Q5PT55 438 aa17.17■□□□□ 0.34
COPB1-209ENST00000533096 SIPA1L3O60292 1781 aaPredicted RBP17.17■□□□□ 0.34
COPB1-209ENST00000533096 CACNA1SQ13698 1873 aa17.16■□□□□ 0.34
COPB1-209ENST00000533096 HIRAP54198 1017 aaPredicted RBP17.16■□□□□ 0.34
COPB1-209ENST00000533096 TNIP1Q15025 636 aa17.16■□□□□ 0.34
COPB1-209ENST00000533096 PROSER3Q2NL68 480 aa17.16■□□□□ 0.34
COPB1-209ENST00000533096 DLK2Q6UY11 383 aa17.16■□□□□ 0.34
COPB1-209ENST00000533096 DDX46Q7L014 1031 aaKnown RBP17.16■□□□□ 0.34
COPB1-209ENST00000533096 COPS6Q7L5N1 327 aa17.16■□□□□ 0.34
COPB1-209ENST00000533096 SAPCD2Q86UD0 394 aa17.16■□□□□ 0.34
COPB1-209ENST00000533096 USP48Q86UV5 1035 aa17.16■□□□□ 0.34
COPB1-209ENST00000533096 SP8Q8IXZ3 490 aa17.16■□□□□ 0.34
COPB1-209ENST00000533096 PLEKHF1Q96S99 279 aa17.16■□□□□ 0.34
COPB1-209ENST00000533096 CNOT7Q9UIV1 285 aaKnown RBP17.16■□□□□ 0.34
COPB1-209ENST00000533096 MAPK8IP3Q9UPT6 1336 aa17.16■□□□□ 0.34
COPB1-209ENST00000533096 SHTN1A0MZ66 631 aa17.15■□□□□ 0.34
COPB1-209ENST00000533096 PDIA6Q15084 440 aa17.15■□□□□ 0.34
COPB1-209ENST00000533096 RBM26Q5T8P6 1007 aaKnown RBP17.15■□□□□ 0.34
COPB1-209ENST00000533096 VPS33BQ9H267 617 aa17.15■□□□□ 0.34
COPB1-209ENST00000533096 TRMT112Q9UI30 125 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms