RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 SPA17Q15506 151 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 GRIPAP1Q4V328 841 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 CTCFLQ8NI51 663 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-234ENST00000532844 ZBTB3Q9H5J0 574 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 ZHX1Q9UKY1 873 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-234ENST00000532844 PCDHB15Q9Y5E8 787 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 ACEP12821 1306 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 DUOX2Q9NRD8 1548 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 SDSP20132 328 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 UBE4AQ14139 1066 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 DZIP1Q86YF9 867 aaKnown RBP9.35□□□□□ -0.91
CTNND1-234ENST00000532844 TMX1Q9H3N1 280 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 DENND4BO75064 1496 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-234ENST00000532844 PI4KAP2A4QPH2 592 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 FOXO3O43524 673 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 URI1O94763 535 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-234ENST00000532844 IFFO1Q0D2I5 559 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 FKBP15Q5T1M5 1219 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 PI4KAP1Q8N8J0 262 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 FBF1Q8TES7 1133 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 TRMT1Q9NXH9 659 aaKnown RBP9.35□□□□□ -0.91
CTNND1-234ENST00000532844 CTTNBP2Q8WZ74 1663 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 PEG3Q9GZU2 1588 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 PRAG1Q86YV5 1406 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 CETN2P41208 172 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 CCDC144CPQ8IYA2 1237 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 ARHGAP45Q92619 1136 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 SMARCC1Q92922 1105 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-234ENST00000532844 PAIP2Q9BPZ3 127 aaKnown RBP9.35□□□□□ -0.91
CTNND1-234ENST00000532844 ZNF608Q9ULD9 1512 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-234ENST00000532844 EIF2AK4Q9P2K8 1649 aaKnown RBP9.35□□□□□ -0.91
CTNND1-234ENST00000532844 NEK1Q96PY6 1258 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 NAP1L3Q99457 506 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-234ENST00000532844 TSG101Q99816 390 aa9.35□□□□□ -0.91
CTNND1-234ENST00000532844 ATP5J2-PTCD1G3V325 749 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 ZPR1O75312 459 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 IQCA1Q86XH1 822 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 TMX3Q96JJ7 454 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 ANKIB1Q9P2G1 1089 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 PARD3Q8TEW0 1356 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 BIN1O00499 593 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 UBE2HP62256 183 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 KLHL40Q2TBA0 621 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 MRPL50Q8N5N7 158 aaKnown RBP9.34□□□□□ -0.91
CTNND1-234ENST00000532844 C16orf45Q96MC5 204 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-234ENST00000532844 MEIS3Q99687 375 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 RNF41Q9H4P4 317 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-234ENST00000532844 CCDC160A6NGH7 325 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 GPTP24298 496 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 TMC6Q7Z403 805 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 CWC25Q9NXE8 425 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-234ENST00000532844 KIF3CO14782 793 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 NLRP5P59047 1200 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 HMG20BQ9P0W2 317 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 CPSF2Q9P2I0 782 aaKnown RBP9.34□□□□□ -0.91
CTNND1-234ENST00000532844 USP16Q9Y5T5 823 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 NUP160Q12769 1436 aa9.34□□□□□ -0.91
CTNND1-234ENST00000532844 RHPN1Q8TCX5 695 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 CPLX3Q8WVH0 158 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 NUP88Q99567 741 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-234ENST00000532844 SYCP2Q9BX26 1530 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 HAND2P61296 217 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 WDR78Q5VTH9 848 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 RAB11FIP4Q86YS3 637 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 JARID2Q92833 1246 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-234ENST00000532844 TTF1Q15361 905 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-234ENST00000532844 KIF4BQ2VIQ3 1234 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 C8orf34Q49A92 452 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 CATIPQ7Z7H3 387 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 CEP83Q9Y592 693 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 ZSCAN22P10073 491 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-234ENST00000532844 CEBPAP49715 358 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-234ENST00000532844 TMEM67Q5HYA8 995 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 DDX46Q7L014 1031 aaKnown RBP9.33□□□□□ -0.92
CTNND1-234ENST00000532844 ZNF444Q8N0Y2 327 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-234ENST00000532844 BEGAINQ9BUH8 593 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 SNRKQ9NRH2 765 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 PPIP5K1Q6PFW1 1433 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 NEMFO60524 1076 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 ZWINTO95229 277 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 ANXA1P04083 346 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 HSPA4P34932 840 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 CACNA2D4Q7Z3S7 1137 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 UBE3BQ7Z3V4 1068 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 CRACR2BQ8N4Y2 399 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-234ENST00000532844 CHPF2Q9P2E5 772 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 CLEC11AQ9Y240 323 aa9.33□□□□□ -0.92
CTNND1-234ENST00000532844 PPP1R12BO60237 982 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-234ENST00000532844 GSDMDP57764 484 aa9.32□□□□□ -0.92
CTNND1-234ENST00000532844 UVSSAQ2YD98 709 aa9.32□□□□□ -0.92
CTNND1-234ENST00000532844 LRSAM1Q6UWE0 723 aa9.32□□□□□ -0.92
CTNND1-234ENST00000532844 PUS7Q96PZ0 661 aaKnown RBP9.32□□□□□ -0.92
CTNND1-234ENST00000532844 CCDC6Q16204 474 aa9.32□□□□□ -0.92
CTNND1-234ENST00000532844 KRT28Q7Z3Y7 464 aa9.32□□□□□ -0.92
CTNND1-234ENST00000532844 IFNL2Q8IZJ0 200 aa9.32□□□□□ -0.92
CTNND1-234ENST00000532844 ANKRD24Q8TF21 1146 aa9.32□□□□□ -0.92
CTNND1-234ENST00000532844 FAM184BQ9ULE4 1060 aa9.32□□□□□ -0.92
CTNND1-234ENST00000532844 GSTTP1A0A1W2PQM5 241 aa9.32□□□□□ -0.92
CTNND1-234ENST00000532844 METAP2P50579 478 aaKnown RBP eCLIP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms