RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 STK31Q9BXU1 1019 aa17.92■□□□□ 0.46
TSPAN4-220ENST00000532375 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
TSPAN4-220ENST00000532375 ATP5J2-PTCD1G3V325 749 aa17.91■□□□□ 0.46
TSPAN4-220ENST00000532375 DALRD3Q5D0E6 543 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-220ENST00000532375 KSR2Q6VAB6 950 aa17.91■□□□□ 0.46
TSPAN4-220ENST00000532375 C3orf67Q6ZVT6 689 aa17.91■□□□□ 0.46
TSPAN4-220ENST00000532375 PPP1R42Q7Z4L9 355 aa17.91■□□□□ 0.46
TSPAN4-220ENST00000532375 RIC3Q7Z5B4 369 aa17.91■□□□□ 0.46
TSPAN4-220ENST00000532375 UTP14AQ9BVJ6 771 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-220ENST00000532375 SLX4Q8IY92 1834 aa17.91■□□□□ 0.46
TSPAN4-220ENST00000532375 PI4KAP2A4QPH2 592 aa17.9■□□□□ 0.46
TSPAN4-220ENST00000532375 FLIIQ13045 1269 aa17.9■□□□□ 0.46
TSPAN4-220ENST00000532375 CRY2Q49AN0 593 aa17.9■□□□□ 0.46
TSPAN4-220ENST00000532375 PI4KAP1Q8N8J0 262 aa17.9■□□□□ 0.46
TSPAN4-220ENST00000532375 METTL22Q9BUU2 404 aaPredicted RBP17.9■□□□□ 0.46
TSPAN4-220ENST00000532375 STYK1Q6J9G0 422 aa17.89■□□□□ 0.45
TSPAN4-220ENST00000532375 TTLL6Q8N841 843 aa17.89■□□□□ 0.45
TSPAN4-220ENST00000532375 MAP3K2Q9Y2U5 619 aa17.89■□□□□ 0.45
TSPAN4-220ENST00000532375 NPHP1O15259 732 aa17.88■□□□□ 0.45
TSPAN4-220ENST00000532375 DDX58O95786 925 aaKnown RBP17.88■□□□□ 0.45
TSPAN4-220ENST00000532375 IGKV5-2P06315 115 aa17.88■□□□□ 0.45
TSPAN4-220ENST00000532375 GTF2E1P29083 439 aaPredicted RBP17.88■□□□□ 0.45
TSPAN4-220ENST00000532375 ZNF428Q96B54 188 aa17.88■□□□□ 0.45
TSPAN4-220ENST00000532375 MASTLQ96GX5 879 aa17.88■□□□□ 0.45
TSPAN4-220ENST00000532375 MYD88Q99836 296 aa17.88■□□□□ 0.45
TSPAN4-220ENST00000532375 RNF123Q5XPI4 1314 aa17.88■□□□□ 0.45
TSPAN4-220ENST00000532375 LAMB2P55268 1798 aa17.87■□□□□ 0.45
TSPAN4-220ENST00000532375 HOXA10P31260 410 aaPredicted RBP17.87■□□□□ 0.45
TSPAN4-220ENST00000532375 HNRNPUQ00839 825 aaKnown RBP eCLIP17.87■□□□□ 0.45
TSPAN4-220ENST00000532375 MRPL50Q8N5N7 158 aaKnown RBP17.87■□□□□ 0.45
TSPAN4-220ENST00000532375 C7orf43Q8WVR3 580 aa17.87■□□□□ 0.45
TSPAN4-220ENST00000532375 TRMT112Q9UI30 125 aaKnown RBP17.87■□□□□ 0.45
TSPAN4-220ENST00000532375 DDX60Q8IY21 1712 aaKnown RBP17.86■□□□□ 0.45
TSPAN4-220ENST00000532375 NPR1P16066 1061 aa17.86■□□□□ 0.45
TSPAN4-220ENST00000532375 ZNF622Q969S3 477 aaKnown RBP eCLIP17.86■□□□□ 0.45
TSPAN4-220ENST00000532375 SH3TC1Q8TE82 1336 aa17.86■□□□□ 0.45
TSPAN4-220ENST00000532375 CACNA1SQ13698 1873 aa17.86■□□□□ 0.45
TSPAN4-220ENST00000532375 SBF1O95248 1867 aa17.85■□□□□ 0.45
TSPAN4-220ENST00000532375 HCLS1P14317 486 aaPredicted RBP17.85■□□□□ 0.45
TSPAN4-220ENST00000532375 CCDC191Q8NCU4 936 aa17.85■□□□□ 0.45
TSPAN4-220ENST00000532375 SSH1Q8WYL5 1049 aa17.85■□□□□ 0.45
TSPAN4-220ENST00000532375 CNKSR1Q969H4 720 aa17.85■□□□□ 0.45
TSPAN4-220ENST00000532375 FAM89AQ96GI7 184 aa17.85■□□□□ 0.45
TSPAN4-220ENST00000532375 PRELPP51888 382 aa17.83■□□□□ 0.44
TSPAN4-220ENST00000532375 FKBP5Q13451 457 aaPredicted RBP17.83■□□□□ 0.44
TSPAN4-220ENST00000532375 PRPF40BQ6NWY9 871 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-220ENST00000532375 ARHGAP27Q6ZUM4 889 aa17.83■□□□□ 0.44
TSPAN4-220ENST00000532375 ZBTB38Q8NAP3 1195 aaPredicted RBP17.83■□□□□ 0.44
TSPAN4-220ENST00000532375 DNAAF4Q8WXU2 420 aa17.83■□□□□ 0.44
TSPAN4-220ENST00000532375 NLRP3Q96P20 1036 aa17.83■□□□□ 0.44
TSPAN4-220ENST00000532375 FER1L6Q2WGJ9 1857 aa17.82■□□□□ 0.44
TSPAN4-220ENST00000532375 NEURL1BA8MQ27 555 aa17.82■□□□□ 0.44
TSPAN4-220ENST00000532375 F6X3S4 739 aa17.82■□□□□ 0.44
TSPAN4-220ENST00000532375 CT47B1P0C2W7 299 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-220ENST00000532375 CWF19L2Q2TBE0 894 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-220ENST00000532375 CWC25Q9NXE8 425 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-220ENST00000532375 TAF1P21675 1872 aa17.82■□□□□ 0.44
TSPAN4-220ENST00000532375 ZBED9Q6R2W3 1325 aa17.81■□□□□ 0.44
TSPAN4-220ENST00000532375 C21orf2O43822 256 aa17.81■□□□□ 0.44
TSPAN4-220ENST00000532375 PCCAP05165 728 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-220ENST00000532375 YY1P25490 414 aa17.81■□□□□ 0.44
TSPAN4-220ENST00000532375 SF3B3Q15393 1217 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-220ENST00000532375 ALDH1L2Q3SY69 923 aa17.81■□□□□ 0.44
TSPAN4-220ENST00000532375 JARID2Q92833 1246 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-220ENST00000532375 CRAMP1Q96RY5 1269 aa17.81■□□□□ 0.44
TSPAN4-220ENST00000532375 SNED1Q8TER0 1413 aa17.81■□□□□ 0.44
TSPAN4-220ENST00000532375 H7C1W4 665 aa17.8■□□□□ 0.44
TSPAN4-220ENST00000532375 NFKBIEO00221 500 aa17.8■□□□□ 0.44
TSPAN4-220ENST00000532375 ALDH1B1P30837 517 aa17.8■□□□□ 0.44
TSPAN4-220ENST00000532375 RTL5Q5HYW3 569 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-220ENST00000532375 BEND3Q5T5X7 828 aa17.8■□□□□ 0.44
TSPAN4-220ENST00000532375 OLFM4Q6UX06 510 aa17.8■□□□□ 0.44
TSPAN4-220ENST00000532375 LINS1Q8NG48 757 aa17.8■□□□□ 0.44
TSPAN4-220ENST00000532375 CCDC88AQ3V6T2 1871 aa17.8■□□□□ 0.44
TSPAN4-220ENST00000532375 IRS4O14654 1257 aaPredicted RBP17.79■□□□□ 0.44
TSPAN4-220ENST00000532375 BRPF1P55201 1214 aaPredicted RBP17.79■□□□□ 0.44
TSPAN4-220ENST00000532375 CASP7P55210 303 aa17.79■□□□□ 0.44
TSPAN4-220ENST00000532375 GCKRQ14397 625 aa17.79■□□□□ 0.44
TSPAN4-220ENST00000532375 SLC51AQ86UW1 340 aa17.79■□□□□ 0.44
TSPAN4-220ENST00000532375 ZNF219Q9P2Y4 722 aaPredicted RBP17.79■□□□□ 0.44
TSPAN4-220ENST00000532375 COL4A1P02462 1669 aa17.78■□□□□ 0.44
TSPAN4-220ENST00000532375 RARSP54136 660 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-220ENST00000532375 NEXNQ0ZGT2 675 aa17.78■□□□□ 0.44
TSPAN4-220ENST00000532375 RPGRQ92834 1020 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-220ENST00000532375 BCL2L13Q9BXK5 485 aa17.78■□□□□ 0.44
TSPAN4-220ENST00000532375 CDHR2Q9BYE9 1310 aa17.77■□□□□ 0.44
TSPAN4-220ENST00000532375 RASSF7Q02833 373 aa17.77■□□□□ 0.44
TSPAN4-220ENST00000532375 RBM17Q96I25 401 aaKnown RBP17.77■□□□□ 0.44
TSPAN4-220ENST00000532375 ABCC4O15439 1325 aa17.76■□□□□ 0.43
TSPAN4-220ENST00000532375 PTPRCP08575 1304 aa17.75■□□□□ 0.43
TSPAN4-220ENST00000532375 LTBP3Q9NS15 1303 aa17.74■□□□□ 0.43
TSPAN4-220ENST00000532375 PDE8AO60658 829 aa17.74■□□□□ 0.43
TSPAN4-220ENST00000532375 C9orf131Q5VYM1 1079 aa17.74■□□□□ 0.43
TSPAN4-220ENST00000532375 PLA2G12BQ9BX93 195 aa17.74■□□□□ 0.43
TSPAN4-220ENST00000532375 SMC4Q9NTJ3 1288 aa17.74■□□□□ 0.43
TSPAN4-220ENST00000532375 MYH3P11055 1940 aa17.74■□□□□ 0.43
TSPAN4-220ENST00000532375 DICER1Q9UPY3 1922 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-220ENST00000532375 BBOX1O75936 387 aa17.73■□□□□ 0.43
TSPAN4-220ENST00000532375 CCDC93Q567U6 631 aa17.73■□□□□ 0.43
TSPAN4-220ENST00000532375 SOGA3Q5TF21 947 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms