RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 ALDH1B1P30837 517 aa29.62■■■□□ 2.33
CAPN1-222ENST00000532285 TWISTNBQ3B726 338 aaPredicted RBP29.62■■■□□ 2.33
CAPN1-222ENST00000532285 CRY2Q49AN0 593 aa29.62■■■□□ 2.33
CAPN1-222ENST00000532285 PHAXQ9H814 394 aaKnown RBP29.62■■■□□ 2.33
CAPN1-222ENST00000532285 ZNF219Q9P2Y4 722 aaPredicted RBP29.62■■■□□ 2.33
CAPN1-222ENST00000532285 FANCIQ9NVI1 1328 aa29.62■■■□□ 2.33
CAPN1-222ENST00000532285 CACNA1FO60840 1977 aa29.61■■■□□ 2.33
CAPN1-222ENST00000532285 SOGA3Q5TF21 947 aa29.61■■■□□ 2.33
CAPN1-222ENST00000532285 RNF181Q9P0P0 153 aa29.61■■■□□ 2.33
CAPN1-222ENST00000532285 CCER2I3L3R5 266 aa29.6■■■□□ 2.33
CAPN1-222ENST00000532285 RASSF7Q02833 373 aa29.6■■■□□ 2.33
CAPN1-222ENST00000532285 GOLGA2Q08379 1002 aa29.6■■■□□ 2.33
CAPN1-222ENST00000532285 SLC10A5Q5PT55 438 aa29.6■■■□□ 2.33
CAPN1-222ENST00000532285 GPBP1L1Q9HC44 474 aaPredicted RBP29.6■■■□□ 2.33
CAPN1-222ENST00000532285 RIC3Q7Z5B4 369 aa29.59■■■□□ 2.33
CAPN1-222ENST00000532285 STK31Q9BXU1 1019 aa29.59■■■□□ 2.33
CAPN1-222ENST00000532285 NFKBIEO00221 500 aa29.58■■■□□ 2.33
CAPN1-222ENST00000532285 LMNB1P20700 586 aa29.58■■■□□ 2.33
CAPN1-222ENST00000532285 ZNF526Q8TF50 670 aaPredicted RBP29.58■■■□□ 2.33
CAPN1-222ENST00000532285 RPGRQ92834 1020 aaKnown RBP29.58■■■□□ 2.33
CAPN1-222ENST00000532285 ISCA1Q9BUE6 129 aa29.58■■■□□ 2.33
CAPN1-222ENST00000532285 TRMT112Q9UI30 125 aaKnown RBP29.58■■■□□ 2.33
CAPN1-222ENST00000532285 DICER1Q9UPY3 1922 aaKnown RBP29.57■■■□□ 2.32
CAPN1-222ENST00000532285 LAMB2P55268 1798 aa29.57■■■□□ 2.32
CAPN1-222ENST00000532285 NLRP3Q96P20 1036 aa29.57■■■□□ 2.32
CAPN1-222ENST00000532285 DDX58O95786 925 aaKnown RBP29.56■■■□□ 2.32
CAPN1-222ENST00000532285 HOXA10P31260 410 aaPredicted RBP29.56■■■□□ 2.32
CAPN1-222ENST00000532285 C7orf43Q8WVR3 580 aa29.56■■■□□ 2.32
CAPN1-222ENST00000532285 SH3TC1Q8TE82 1336 aa29.55■■■□□ 2.32
CAPN1-222ENST00000532285 TRIM28Q13263 835 aaKnown RBP29.55■■■□□ 2.32
CAPN1-222ENST00000532285 MYH16Q9H6N6 1097 aa29.55■■■□□ 2.32
CAPN1-222ENST00000532285 ATP5J2-PTCD1G3V325 749 aa29.54■■■□□ 2.32
CAPN1-222ENST00000532285 RBM17Q96I25 401 aaKnown RBP29.54■■■□□ 2.32
CAPN1-222ENST00000532285 SPINK5Q9NQ38 1064 aaPredicted RBP29.54■■■□□ 2.32
CAPN1-222ENST00000532285 LTBP3Q9NS15 1303 aa29.53■■■□□ 2.32
CAPN1-222ENST00000532285 PRELPP51888 382 aa29.53■■■□□ 2.32
CAPN1-222ENST00000532285 EXOSC9Q06265 439 aaKnown RBP29.53■■■□□ 2.32
CAPN1-222ENST00000532285 CCDC93Q567U6 631 aa29.53■■■□□ 2.32
CAPN1-222ENST00000532285 ZNF521Q96K83 1311 aa29.52■■■□□ 2.32
CAPN1-222ENST00000532285 ZC3H4Q9UPT8 1303 aaKnown RBP29.52■■■□□ 2.32
CAPN1-222ENST00000532285 TIAM2Q8IVF5 1701 aa29.52■■■□□ 2.32
CAPN1-222ENST00000532285 C3orf67Q6ZVT6 689 aa29.52■■■□□ 2.32
CAPN1-222ENST00000532285 CRAMP1Q96RY5 1269 aa29.52■■■□□ 2.32
CAPN1-222ENST00000532285 TAOK3Q9H2K8 898 aa29.52■■■□□ 2.32
CAPN1-222ENST00000532285 DDX60Q8IY21 1712 aaKnown RBP29.51■■■□□ 2.32
CAPN1-222ENST00000532285 TCERG1O14776 1098 aaKnown RBP29.51■■■□□ 2.31
CAPN1-222ENST00000532285 VAMP4O75379 141 aa29.51■■■□□ 2.31
CAPN1-222ENST00000532285 SYNE4Q8N205 404 aa29.51■■■□□ 2.31
CAPN1-222ENST00000532285 SLC4A2P04920 1241 aa29.5■■■□□ 2.31
CAPN1-222ENST00000532285 HCLS1P14317 486 aaPredicted RBP29.5■■■□□ 2.31
CAPN1-222ENST00000532285 RTKN2Q8IZC4 609 aa29.49■■■□□ 2.31
CAPN1-222ENST00000532285 MYD88Q99836 296 aa29.49■■■□□ 2.31
CAPN1-222ENST00000532285 METTL22Q9BUU2 404 aaPredicted RBP29.49■■■□□ 2.31
CAPN1-222ENST00000532285 KSR2Q6VAB6 950 aa29.48■■■□□ 2.31
CAPN1-222ENST00000532285 ZNF428Q96B54 188 aa29.48■■■□□ 2.31
CAPN1-222ENST00000532285 FAM89AQ96GI7 184 aa29.47■■■□□ 2.31
CAPN1-222ENST00000532285 MAP3K2Q9Y2U5 619 aa29.47■■■□□ 2.31
CAPN1-222ENST00000532285 DIEXFQ68CQ4 756 aaKnown RBP29.46■■■□□ 2.31
CAPN1-222ENST00000532285 CC2D2BQ6DHV5 1058 aa29.46■■■□□ 2.31
CAPN1-222ENST00000532285 CCDC191Q8NCU4 936 aa29.46■■■□□ 2.31
CAPN1-222ENST00000532285 KDM2BQ8NHM5 1336 aa29.45■■■□□ 2.31
CAPN1-222ENST00000532285 PI4KAP2A4QPH2 592 aa29.45■■■□□ 2.31
CAPN1-222ENST00000532285 C1QTNF8P60827 252 aa29.45■■■□□ 2.31
CAPN1-222ENST00000532285 FKBP4Q02790 459 aaKnown RBP eCLIP29.45■■■□□ 2.31
CAPN1-222ENST00000532285 OLFM4Q6UX06 510 aa29.45■■■□□ 2.31
CAPN1-222ENST00000532285 G2E3Q7L622 706 aa29.45■■■□□ 2.31
CAPN1-222ENST00000532285 PI4KAP1Q8N8J0 262 aa29.45■■■□□ 2.31
CAPN1-222ENST00000532285 ZBTB38Q8NAP3 1195 aaPredicted RBP29.44■■■□□ 2.3
CAPN1-222ENST00000532285 PPEF1O14829 653 aaPredicted RBP29.43■■■□□ 2.3
CAPN1-222ENST00000532285 GRIPAP1Q4V328 841 aa29.43■■■□□ 2.3
CAPN1-222ENST00000532285 CWC25Q9NXE8 425 aaPredicted RBP29.43■■■□□ 2.3
CAPN1-222ENST00000532285 TAF1P21675 1872 aa29.42■■■□□ 2.3
CAPN1-222ENST00000532285 HSP90B1P14625 803 aaKnown RBP29.42■■■□□ 2.3
CAPN1-222ENST00000532285 FLIIQ13045 1269 aa29.42■■■□□ 2.3
CAPN1-222ENST00000532285 DDX46Q7L014 1031 aaKnown RBP29.42■■■□□ 2.3
CAPN1-222ENST00000532285 ABCC4O15439 1325 aa29.42■■■□□ 2.3
CAPN1-222ENST00000532285 KIF3CO14782 793 aa29.41■■■□□ 2.3
CAPN1-222ENST00000532285 NEXNQ0ZGT2 675 aa29.41■■■□□ 2.3
CAPN1-222ENST00000532285 RTL5Q5HYW3 569 aaPredicted RBP29.41■■■□□ 2.3
CAPN1-222ENST00000532285 E9PSI1 815 aa29.4■■■□□ 2.3
CAPN1-222ENST00000532285 IRS4O14654 1257 aaPredicted RBP29.4■■■□□ 2.3
CAPN1-222ENST00000532285 BBOX1O75936 387 aa29.4■■■□□ 2.3
CAPN1-222ENST00000532285 PCCAP05165 728 aaPredicted RBP29.4■■■□□ 2.3
CAPN1-222ENST00000532285 NMRK2Q9NPI5 230 aa29.4■■■□□ 2.3
CAPN1-222ENST00000532285 SNED1Q8TER0 1413 aa29.39■■■□□ 2.3
CAPN1-222ENST00000532285 GLTPD2A6NH11 291 aa29.39■■■□□ 2.3
CAPN1-222ENST00000532285 SF3B3Q15393 1217 aaKnown RBP29.39■■■□□ 2.3
CAPN1-222ENST00000532285 PSMD1Q99460 953 aa29.39■■■□□ 2.3
CAPN1-222ENST00000532285 TMX4Q9H1E5 349 aaPredicted RBP29.39■■■□□ 2.3
CAPN1-222ENST00000532285 FKBP5Q13451 457 aaPredicted RBP29.38■■■□□ 2.29
CAPN1-222ENST00000532285 ZNF277Q9NRM2 450 aaPredicted RBP29.38■■■□□ 2.29
CAPN1-222ENST00000532285 ATP6V0A2Q9Y487 856 aa29.38■■■□□ 2.29
CAPN1-222ENST00000532285 IGKV5-2P06315 115 aa29.37■■■□□ 2.29
CAPN1-222ENST00000532285 GRAPQ13588 217 aa29.37■■■□□ 2.29
CAPN1-222ENST00000532285 DPY19L2Q6NUT2 758 aa29.37■■■□□ 2.29
CAPN1-222ENST00000532285 GRAPLQ8TC17 118 aaPredicted RBP29.37■■■□□ 2.29
CAPN1-222ENST00000532285 SLFN5Q08AF3 891 aa29.35■■■□□ 2.29
CAPN1-222ENST00000532285 MIER1Q8N108 512 aa29.35■■■□□ 2.29
CAPN1-222ENST00000532285 MYH3P11055 1940 aa29.34■■■□□ 2.29
CAPN1-222ENST00000532285 IARSP41252 1262 aaKnown RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms