RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 GPC2Q8N158 579 aa22.96■■□□□ 1.27
PKP3-208ENST00000531857 PLEKHF1Q96S99 279 aa22.96■■□□□ 1.27
PKP3-208ENST00000531857 PSMD1Q99460 953 aa22.96■■□□□ 1.27
PKP3-208ENST00000531857 PNMA8AQ86V59 439 aaPredicted RBP22.95■■□□□ 1.26
PKP3-208ENST00000531857 PNISRQ8TF01 805 aaKnown RBP22.95■■□□□ 1.26
PKP3-208ENST00000531857 ZBTB3Q9H5J0 574 aa22.95■■□□□ 1.26
PKP3-208ENST00000531857 SUSD4Q5VX71 490 aa22.94■■□□□ 1.26
PKP3-208ENST00000531857 KIF6Q6ZMV9 814 aa22.94■■□□□ 1.26
PKP3-208ENST00000531857 CNTROBQ8N137 903 aa22.94■■□□□ 1.26
PKP3-208ENST00000531857 JDP2Q8WYK2 163 aa22.94■■□□□ 1.26
PKP3-208ENST00000531857 RPGRQ92834 1020 aaKnown RBP22.94■■□□□ 1.26
PKP3-208ENST00000531857 RIC1Q4ADV7 1423 aa22.93■■□□□ 1.26
PKP3-208ENST00000531857 HOXA10P31260 410 aaPredicted RBP22.93■■□□□ 1.26
PKP3-208ENST00000531857 LAMB2P55268 1798 aa22.92■■□□□ 1.26
PKP3-208ENST00000531857 NEFMP07197 916 aa22.92■■□□□ 1.26
PKP3-208ENST00000531857 NFE2L2Q16236 605 aa22.92■■□□□ 1.26
PKP3-208ENST00000531857 GJA3Q9Y6H8 435 aa22.92■■□□□ 1.26
PKP3-208ENST00000531857 IBTKQ9P2D0 1353 aaPredicted RBP22.91■■□□□ 1.26
PKP3-208ENST00000531857 TCERG1O14776 1098 aaKnown RBP22.91■■□□□ 1.26
PKP3-208ENST00000531857 CC2D2BQ6DHV5 1058 aa22.91■■□□□ 1.26
PKP3-208ENST00000531857 C3orf67Q6ZVT6 689 aa22.91■■□□□ 1.26
PKP3-208ENST00000531857 ZNF34Q8IZ26 560 aa22.91■■□□□ 1.26
PKP3-208ENST00000531857 TRPM7Q96QT4 1865 aa22.91■■□□□ 1.26
PKP3-208ENST00000531857 NTSR2O95665 410 aa22.9■■□□□ 1.26
PKP3-208ENST00000531857 EIF6P56537 245 aaKnown RBP22.9■■□□□ 1.26
PKP3-208ENST00000531857 PRDM10Q9NQV6 1147 aa22.9■■□□□ 1.26
PKP3-208ENST00000531857 RASSF10A6NK89 507 aa22.89■■□□□ 1.25
PKP3-208ENST00000531857 CTCFP49711 727 aaPredicted RBP22.89■■□□□ 1.25
PKP3-208ENST00000531857 AIDAQ96BJ3 306 aa22.89■■□□□ 1.25
PKP3-208ENST00000531857 CRAMP1Q96RY5 1269 aa22.89■■□□□ 1.25
PKP3-208ENST00000531857 WBP1LQ9NX94 342 aa22.89■■□□□ 1.25
PKP3-208ENST00000531857 ANKRD36CQ5JPF3 1778 aa22.89■■□□□ 1.25
PKP3-208ENST00000531857 PPEF1O14829 653 aaPredicted RBP22.88■■□□□ 1.25
PKP3-208ENST00000531857 EPS15P42566 896 aa22.88■■□□□ 1.25
PKP3-208ENST00000531857 SCNN1DP51172 638 aa22.88■■□□□ 1.25
PKP3-208ENST00000531857 FMR1Q06787 632 aaKnown RBP eCLIP22.88■■□□□ 1.253e-7■□□□□ 10.6
PKP3-208ENST00000531857 DEFB115Q30KQ5 88 aa22.88■■□□□ 1.25
PKP3-208ENST00000531857 GIGYF2Q6Y7W6 1299 aaKnown RBP22.88■■□□□ 1.25
PKP3-208ENST00000531857 LARGE2Q8N3Y3 721 aa22.88■■□□□ 1.25
PKP3-208ENST00000531857 RBM17Q96I25 401 aaKnown RBP22.88■■□□□ 1.25
PKP3-208ENST00000531857 TAF1P21675 1872 aa22.87■■□□□ 1.25
PKP3-208ENST00000531857 LBX1P52954 281 aa22.86■■□□□ 1.25
PKP3-208ENST00000531857 LRP10Q7Z4F1 713 aa22.86■■□□□ 1.25
PKP3-208ENST00000531857 ABT1Q9ULW3 272 aaKnown RBP22.86■■□□□ 1.25
PKP3-208ENST00000531857 ERBB4Q15303 1308 aa22.85■■□□□ 1.25
PKP3-208ENST00000531857 LMOD1P29536 600 aaPredicted RBP22.85■■□□□ 1.25
PKP3-208ENST00000531857 PDIA6Q15084 440 aa22.85■■□□□ 1.25
PKP3-208ENST00000531857 GRIPAP1Q4V328 841 aa22.85■■□□□ 1.25
PKP3-208ENST00000531857 DDX21Q9NR30 783 aaKnown RBP eCLIP22.85■■□□□ 1.25
PKP3-208ENST00000531857 WDR33Q9C0J8 1336 aaKnown RBP22.84■■□□□ 1.25
PKP3-208ENST00000531857 PPP1R42Q7Z4L9 355 aa22.84■■□□□ 1.25
PKP3-208ENST00000531857 MAPK8IP3Q9UPT6 1336 aa22.83■■□□□ 1.25
PKP3-208ENST00000531857 THSD7BQ9C0I4 1608 aa22.83■■□□□ 1.25
PKP3-208ENST00000531857 ANXA1P04083 346 aa22.83■■□□□ 1.25
PKP3-208ENST00000531857 PROSER3Q2NL68 480 aa22.83■■□□□ 1.25
PKP3-208ENST00000531857 NIM1KQ8IY84 436 aa22.83■■□□□ 1.25
PKP3-208ENST00000531857 TSPYL4Q9UJ04 414 aa22.83■■□□□ 1.25
PKP3-208ENST00000531857 PPIP5K2O43314 1243 aa22.82■■□□□ 1.24
PKP3-208ENST00000531857 EIF2S2P20042 333 aaKnown RBP22.82■■□□□ 1.24
PKP3-208ENST00000531857 AOC3Q16853 763 aa22.82■■□□□ 1.24
PKP3-208ENST00000531857 PARP10Q53GL7 1025 aa22.82■■□□□ 1.24
PKP3-208ENST00000531857 NLRP3Q96P20 1036 aa22.82■■□□□ 1.24
PKP3-208ENST00000531857 TRAF5O00463 557 aa22.81■■□□□ 1.24
PKP3-208ENST00000531857 HSPA8P11142 646 aaKnown RBP22.81■■□□□ 1.24
PKP3-208ENST00000531857 SLC10A5Q5PT55 438 aa22.81■■□□□ 1.24
PKP3-208ENST00000531857 UTP14AQ9BVJ6 771 aaKnown RBP22.81■■□□□ 1.24
PKP3-208ENST00000531857 ATP6V0A2Q9Y487 856 aa22.81■■□□□ 1.24
PKP3-208ENST00000531857 ABCC4O15439 1325 aa22.81■■□□□ 1.24
PKP3-208ENST00000531857 CST9Q5W186 159 aa22.8■■□□□ 1.24
PKP3-208ENST00000531857 USP50Q70EL3 339 aaPredicted RBP22.8■■□□□ 1.24
PKP3-208ENST00000531857 PNNQ9H307 717 aaKnown RBP22.8■■□□□ 1.24
PKP3-208ENST00000531857 RIPK4P57078 832 aa22.78■■□□□ 1.24
PKP3-208ENST00000531857 MAP2K1Q02750 393 aaPredicted RBP22.78■■□□□ 1.24
PKP3-208ENST00000531857 CXCL9Q07325 125 aa22.78■■□□□ 1.24
PKP3-208ENST00000531857 GPRC5DQ9NZD1 345 aa22.78■■□□□ 1.24
PKP3-208ENST00000531857 NECTIN2Q92692 538 aa22.77■■□□□ 1.24
PKP3-208ENST00000531857 CAPNS2Q96L46 248 aa22.77■■□□□ 1.24
PKP3-208ENST00000531857 HCLS1P14317 486 aaPredicted RBP22.76■■□□□ 1.23
PKP3-208ENST00000531857 CYP4F22Q6NT55 531 aa22.76■■□□□ 1.23
PKP3-208ENST00000531857 PAXIP1Q6ZW49 1069 aaPredicted RBP22.76■■□□□ 1.23
PKP3-208ENST00000531857 RTFDC1Q9BY42 306 aaPredicted RBP22.76■■□□□ 1.23
PKP3-208ENST00000531857 TMX4Q9H1E5 349 aaPredicted RBP22.76■■□□□ 1.23
PKP3-208ENST00000531857 VPS33BQ9H267 617 aa22.76■■□□□ 1.23
PKP3-208ENST00000531857 ZNRF3Q9ULT6 936 aa22.76■■□□□ 1.23
PKP3-208ENST00000531857 DDX60Q8IY21 1712 aaKnown RBP22.76■■□□□ 1.23
PKP3-208ENST00000531857 AIMP1Q12904 312 aaKnown RBP22.75■■□□□ 1.23
PKP3-208ENST00000531857 GRM1Q13255 1194 aa22.75■■□□□ 1.23
PKP3-208ENST00000531857 COPS6Q7L5N1 327 aa22.75■■□□□ 1.23
PKP3-208ENST00000531857 NLRP10Q86W26 655 aa22.75■■□□□ 1.23
PKP3-208ENST00000531857 ADARB2Q9NS39 739 aaKnown RBP22.75■■□□□ 1.23
PKP3-208ENST00000531857 DPP8Q6V1X1 898 aaPredicted RBP22.74■■□□□ 1.23
PKP3-208ENST00000531857 SP8Q8IXZ3 490 aa22.74■■□□□ 1.23
PKP3-208ENST00000531857 SUPT20HQ8NEM7 779 aa22.74■■□□□ 1.23
PKP3-208ENST00000531857 XAGE3Q8WTP9 111 aa22.74■■□□□ 1.23
PKP3-208ENST00000531857 LRRC37AA6NMS7 1700 aa22.74■■□□□ 1.23
PKP3-208ENST00000531857 DUOX1Q9NRD9 1551 aa22.73■■□□□ 1.23
PKP3-208ENST00000531857 BBOX1O75936 387 aa22.73■■□□□ 1.23
PKP3-208ENST00000531857 TMPOP42166 694 aaKnown RBP22.73■■□□□ 1.23
PKP3-208ENST00000531857 GMPSP49915 693 aaPredicted RBP22.73■■□□□ 1.23
PKP3-208ENST00000531857 ZNF428Q96B54 188 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms