RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 SUSD4Q5VX71 490 aa19.07■□□□□ 0.64
CTSB-221ENST00000531502 CC2D2BQ6DHV5 1058 aa19.07■□□□□ 0.64
CTSB-221ENST00000531502 SLC51AQ86UW1 340 aa19.07■□□□□ 0.64
CTSB-221ENST00000531502 ZNF34Q8IZ26 560 aa19.07■□□□□ 0.64
CTSB-221ENST00000531502 GPC2Q8N158 579 aa19.07■□□□□ 0.64
CTSB-221ENST00000531502 LTBP1Q14766 1721 aa19.06■□□□□ 0.64
CTSB-221ENST00000531502 MYL6BP14649 208 aa19.06■□□□□ 0.64
CTSB-221ENST00000531502 GPTP24298 496 aa19.06■□□□□ 0.64
CTSB-221ENST00000531502 KIF6Q6ZMV9 814 aa19.06■□□□□ 0.64
CTSB-221ENST00000531502 PNMA8AQ86V59 439 aaPredicted RBP19.06■□□□□ 0.64
CTSB-221ENST00000531502 ZBTB3Q9H5J0 574 aa19.06■□□□□ 0.64
CTSB-221ENST00000531502 NTSR2O95665 410 aa19.05■□□□□ 0.64
CTSB-221ENST00000531502 NEFMP07197 916 aa19.05■□□□□ 0.64
CTSB-221ENST00000531502 MAP1SQ66K74 1059 aaPredicted RBP19.05■□□□□ 0.64
CTSB-221ENST00000531502 LRP10Q7Z4F1 713 aa19.05■□□□□ 0.64
CTSB-221ENST00000531502 CNTROBQ8N137 903 aa19.05■□□□□ 0.64
CTSB-221ENST00000531502 CLEC11AQ9Y240 323 aa19.05■□□□□ 0.64
CTSB-221ENST00000531502 GIGYF2Q6Y7W6 1299 aaKnown RBP19.04■□□□□ 0.64
CTSB-221ENST00000531502 C3orf67Q6ZVT6 689 aa19.04■□□□□ 0.64
CTSB-221ENST00000531502 JDP2Q8WYK2 163 aa19.04■□□□□ 0.64
CTSB-221ENST00000531502 RPGRQ92834 1020 aaKnown RBP19.04■□□□□ 0.64
CTSB-221ENST00000531502 CRAMP1Q96RY5 1269 aa19.04■□□□□ 0.64
CTSB-221ENST00000531502 ERBB4Q15303 1308 aa19.03■□□□□ 0.64
CTSB-221ENST00000531502 RASSF10A6NK89 507 aa19.02■□□□□ 0.64
CTSB-221ENST00000531502 PDIA6Q15084 440 aa19.02■□□□□ 0.64
CTSB-221ENST00000531502 GRIPAP1Q4V328 841 aa19.02■□□□□ 0.64
CTSB-221ENST00000531502 PRDM10Q9NQV6 1147 aa19.02■□□□□ 0.64
CTSB-221ENST00000531502 SCNN1DP51172 638 aa19.01■□□□□ 0.63
CTSB-221ENST00000531502 EIF6P56537 245 aaKnown RBP19.01■□□□□ 0.63
CTSB-221ENST00000531502 RBM17Q96I25 401 aaKnown RBP19.01■□□□□ 0.63
CTSB-221ENST00000531502 WBP1LQ9NX94 342 aa19.01■□□□□ 0.63
CTSB-221ENST00000531502 PPEF1O14829 653 aaPredicted RBP19■□□□□ 0.63
CTSB-221ENST00000531502 SLC10A5Q5PT55 438 aa19■□□□□ 0.63
CTSB-221ENST00000531502 GJA3Q9Y6H8 435 aa19■□□□□ 0.63
CTSB-221ENST00000531502 EPS15P42566 896 aa18.99■□□□□ 0.63
CTSB-221ENST00000531502 CTCFP49711 727 aaPredicted RBP18.99■□□□□ 0.63
CTSB-221ENST00000531502 DEFB115Q30KQ5 88 aa18.99■□□□□ 0.63
CTSB-221ENST00000531502 PARP10Q53GL7 1025 aa18.99■□□□□ 0.63
CTSB-221ENST00000531502 PPP1R42Q7Z4L9 355 aa18.99■□□□□ 0.63
CTSB-221ENST00000531502 LARGE2Q8N3Y3 721 aa18.99■□□□□ 0.63
CTSB-221ENST00000531502 PNNQ9H307 717 aaKnown RBP18.99■□□□□ 0.63
CTSB-221ENST00000531502 DDX21Q9NR30 783 aaKnown RBP eCLIP18.99■□□□□ 0.63
CTSB-221ENST00000531502 TSPYL4Q9UJ04 414 aa18.99■□□□□ 0.63
CTSB-221ENST00000531502 TCERG1O14776 1098 aaKnown RBP18.98■□□□□ 0.63
CTSB-221ENST00000531502 PROSER3Q2NL68 480 aa18.98■□□□□ 0.63
CTSB-221ENST00000531502 MAPK8IP3Q9UPT6 1336 aa18.98■□□□□ 0.63
CTSB-221ENST00000531502 FMR1Q06787 632 aaKnown RBP eCLIP18.97■□□□□ 0.63
CTSB-221ENST00000531502 NLRP3Q96P20 1036 aa18.97■□□□□ 0.63
CTSB-221ENST00000531502 ATP6V0A2Q9Y487 856 aa18.97■□□□□ 0.63
CTSB-221ENST00000531502 WDR33Q9C0J8 1336 aaKnown RBP18.97■□□□□ 0.63
CTSB-221ENST00000531502 LAMB2P55268 1798 aa18.96■□□□□ 0.63
CTSB-221ENST00000531502 ANXA1P04083 346 aa18.96■□□□□ 0.63
CTSB-221ENST00000531502 EIF2S2P20042 333 aaKnown RBP18.96■□□□□ 0.63
CTSB-221ENST00000531502 LMOD1P29536 600 aaPredicted RBP18.96■□□□□ 0.63
CTSB-221ENST00000531502 AIDAQ96BJ3 306 aa18.96■□□□□ 0.63
CTSB-221ENST00000531502 UTP14AQ9BVJ6 771 aaKnown RBP18.96■□□□□ 0.63
CTSB-221ENST00000531502 BABAM1Q9NWV8 329 aa18.96■□□□□ 0.63
CTSB-221ENST00000531502 ABCC4O15439 1325 aa18.96■□□□□ 0.63
CTSB-221ENST00000531502 RIPK4P57078 832 aa18.95■□□□□ 0.62
CTSB-221ENST00000531502 AOC3Q16853 763 aa18.95■□□□□ 0.62
CTSB-221ENST00000531502 USP50Q70EL3 339 aaPredicted RBP18.95■□□□□ 0.62
CTSB-221ENST00000531502 NIM1KQ8IY84 436 aa18.95■□□□□ 0.62
CTSB-221ENST00000531502 RTFDC1Q9BY42 306 aaPredicted RBP18.95■□□□□ 0.62
CTSB-221ENST00000531502 VPS33BQ9H267 617 aa18.95■□□□□ 0.62
CTSB-221ENST00000531502 ANKRD36CQ5JPF3 1778 aa18.95■□□□□ 0.62
CTSB-221ENST00000531502 THSD7BQ9C0I4 1608 aa18.95■□□□□ 0.62
CTSB-221ENST00000531502 PPIP5K2O43314 1243 aa18.94■□□□□ 0.62
CTSB-221ENST00000531502 LBX1P52954 281 aa18.94■□□□□ 0.62
CTSB-221ENST00000531502 ABT1Q9ULW3 272 aaKnown RBP18.94■□□□□ 0.62
CTSB-221ENST00000531502 TRPM7Q96QT4 1865 aa18.94■□□□□ 0.62
CTSB-221ENST00000531502 HSPA8P11142 646 aaKnown RBP18.93■□□□□ 0.62
CTSB-221ENST00000531502 TMPOP42166 694 aaKnown RBP18.93■□□□□ 0.62
CTSB-221ENST00000531502 CXCL9Q07325 125 aa18.93■□□□□ 0.62
CTSB-221ENST00000531502 CST9Q5W186 159 aa18.93■□□□□ 0.62
CTSB-221ENST00000531502 GPRC5DQ9NZD1 345 aa18.93■□□□□ 0.62
CTSB-221ENST00000531502 COPS6Q7L5N1 327 aa18.92■□□□□ 0.62
CTSB-221ENST00000531502 NLRP10Q86W26 655 aa18.92■□□□□ 0.62
CTSB-221ENST00000531502 TRAF5O00463 557 aa18.91■□□□□ 0.62
CTSB-221ENST00000531502 BBOX1O75936 387 aa18.91■□□□□ 0.62
CTSB-221ENST00000531502 HCLS1P14317 486 aaPredicted RBP18.91■□□□□ 0.62
CTSB-221ENST00000531502 MAP2K1Q02750 393 aaPredicted RBP18.91■□□□□ 0.62
CTSB-221ENST00000531502 SP8Q8IXZ3 490 aa18.91■□□□□ 0.62
CTSB-221ENST00000531502 XAGE3Q8WTP9 111 aa18.91■□□□□ 0.62
CTSB-221ENST00000531502 ADARB2Q9NS39 739 aaKnown RBP18.91■□□□□ 0.62
CTSB-221ENST00000531502 ZNRF3Q9ULT6 936 aa18.91■□□□□ 0.62
CTSB-221ENST00000531502 TCIRG1Q13488 830 aa18.9■□□□□ 0.62
CTSB-221ENST00000531502 SUPT20HQ8NEM7 779 aa18.9■□□□□ 0.62
CTSB-221ENST00000531502 TAF1P21675 1872 aa18.9■□□□□ 0.62
CTSB-221ENST00000531502 KIAA2012Q0VF49 1180 aa18.89■□□□□ 0.61
CTSB-221ENST00000531502 AIMP1Q12904 312 aaKnown RBP18.89■□□□□ 0.61
CTSB-221ENST00000531502 HSP90AB3PQ58FF7 597 aa18.89■□□□□ 0.61
CTSB-221ENST00000531502 NECTIN2Q92692 538 aa18.89■□□□□ 0.61
CTSB-221ENST00000531502 CAPNS2Q96L46 248 aa18.89■□□□□ 0.61
CTSB-221ENST00000531502 TMX4Q9H1E5 349 aaPredicted RBP18.89■□□□□ 0.61
CTSB-221ENST00000531502 TLL2Q9Y6L7 1015 aa18.89■□□□□ 0.61
CTSB-221ENST00000531502 CHL1O00533 1208 aa18.88■□□□□ 0.61
CTSB-221ENST00000531502 GMPSP49915 693 aaPredicted RBP18.88■□□□□ 0.61
CTSB-221ENST00000531502 LMOD3Q0VAK6 560 aa18.88■□□□□ 0.61
CTSB-221ENST00000531502 KRT24Q2M2I5 525 aa18.88■□□□□ 0.61
CTSB-221ENST00000531502 CYP4F22Q6NT55 531 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms