RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 SUSD4Q5VX71 490 aa21.45■■□□□ 1.02
SF3B2-211ENST00000531041 ANKRD31Q8N7Z5 1873 aa21.45■■□□□ 1.02
SF3B2-211ENST00000531041 SRCIN1Q9C0H9 1055 aa21.45■■□□□ 1.02
SF3B2-211ENST00000531041 CWC25Q9NXE8 425 aaPredicted RBP21.45■■□□□ 1.02
SF3B2-211ENST00000531041 TNNQ9UQP3 1299 aa21.45■■□□□ 1.02
SF3B2-211ENST00000531041 DDX60Q8IY21 1712 aaKnown RBP21.44■■□□□ 1.02
SF3B2-211ENST00000531041 PLIN1O60240 522 aa21.44■■□□□ 1.02
SF3B2-211ENST00000531041 INTS3Q68E01 1043 aaKnown RBP21.44■■□□□ 1.02
SF3B2-211ENST00000531041 DZIP1LQ8IYY4 767 aaKnown RBP21.44■■□□□ 1.02
SF3B2-211ENST00000531041 CLUAP1Q96AJ1 413 aa21.44■■□□□ 1.02
SF3B2-211ENST00000531041 NYXQ9GZU5 481 aa21.44■■□□□ 1.02
SF3B2-211ENST00000531041 LRP5O75197 1615 aa21.43■■□□□ 1.02
SF3B2-211ENST00000531041 RNF123Q5XPI4 1314 aa21.43■■□□□ 1.02
SF3B2-211ENST00000531041 NTSR2O95665 410 aa21.43■■□□□ 1.02
SF3B2-211ENST00000531041 CENPBP07199 599 aaPredicted RBP21.43■■□□□ 1.02
SF3B2-211ENST00000531041 TPTE2Q6XPS3 522 aa21.43■■□□□ 1.02
SF3B2-211ENST00000531041 NBPF5PQ86XG9 351 aaPredicted RBP21.43■■□□□ 1.02
SF3B2-211ENST00000531041 UTP14AQ9BVJ6 771 aaKnown RBP21.43■■□□□ 1.02
SF3B2-211ENST00000531041 RRP1P56182 461 aaKnown RBP21.42■■□□□ 1.02
SF3B2-211ENST00000531041 GCKRQ14397 625 aa21.42■■□□□ 1.02
SF3B2-211ENST00000531041 FTSJ3Q8IY81 847 aaKnown RBP21.42■■□□□ 1.02
SF3B2-211ENST00000531041 FAM177BA6PVY3 158 aa21.41■■□□□ 1.02
SF3B2-211ENST00000531041 PDE3AQ14432 1141 aa21.41■■□□□ 1.02
SF3B2-211ENST00000531041 CNBD1Q8NA66 436 aa21.41■■□□□ 1.02
SF3B2-211ENST00000531041 TRMT112Q9UI30 125 aaKnown RBP21.41■■□□□ 1.02
SF3B2-211ENST00000531041 RLBP1P12271 317 aa21.4■■□□□ 1.02
SF3B2-211ENST00000531041 PRR5LQ6MZQ0 368 aa21.4■■□□□ 1.02
SF3B2-211ENST00000531041 ZBTB38Q8NAP3 1195 aaPredicted RBP21.4■■□□□ 1.02
SF3B2-211ENST00000531041 PCCAP05165 728 aaPredicted RBP21.39■■□□□ 1.02
SF3B2-211ENST00000531041 TMEM57Q8N5G2 664 aa21.39■■□□□ 1.02
SF3B2-211ENST00000531041 SUPT16HQ9Y5B9 1047 aaKnown RBP21.39■■□□□ 1.02
SF3B2-211ENST00000531041 SH3TC1Q8TE82 1336 aa21.39■■□□□ 1.01
SF3B2-211ENST00000531041 H7C1W4 665 aa21.38■■□□□ 1.01
SF3B2-211ENST00000531041 NPHP1O15259 732 aa21.38■■□□□ 1.01
SF3B2-211ENST00000531041 PANK1Q8TE04 598 aa21.38■■□□□ 1.01
SF3B2-211ENST00000531041 GRM8O00222 908 aa21.38■■□□□ 1.01
SF3B2-211ENST00000531041 GTF2E1P29083 439 aaPredicted RBP21.38■■□□□ 1.01
SF3B2-211ENST00000531041 NUTM1Q86Y26 1132 aa21.38■■□□□ 1.01
SF3B2-211ENST00000531041 FAM89AQ96GI7 184 aa21.38■■□□□ 1.01
SF3B2-211ENST00000531041 RIC1Q4ADV7 1423 aa21.37■■□□□ 1.01
SF3B2-211ENST00000531041 TNRC6CQ9HCJ0 1690 aaKnown RBP21.37■■□□□ 1.01
SF3B2-211ENST00000531041 UTYO14607 1347 aa21.37■■□□□ 1.01
SF3B2-211ENST00000531041 C10orf71Q711Q0 1435 aa21.37■■□□□ 1.01
SF3B2-211ENST00000531041 ST5P78524 1137 aa21.37■■□□□ 1.01
SF3B2-211ENST00000531041 ERFEQ4G0M1 354 aa21.37■■□□□ 1.01
SF3B2-211ENST00000531041 SLC10A5Q5PT55 438 aa21.37■■□□□ 1.01
SF3B2-211ENST00000531041 USP44Q9H0E7 712 aa21.37■■□□□ 1.01
SF3B2-211ENST00000531041 C9orf78Q9NZ63 289 aaPredicted RBP21.37■■□□□ 1.01
SF3B2-211ENST00000531041 CDHR2Q9BYE9 1310 aa21.36■■□□□ 1.01
SF3B2-211ENST00000531041 CASP7P55210 303 aa21.36■■□□□ 1.01
SF3B2-211ENST00000531041 UBE3BQ7Z3V4 1068 aa21.36■■□□□ 1.01
SF3B2-211ENST00000531041 SYNE4Q8N205 404 aa21.36■■□□□ 1.01
SF3B2-211ENST00000531041 DLEC1Q9Y238 1755 aa21.36■■□□□ 1.01
SF3B2-211ENST00000531041 KIAA1551Q9HCM1 1747 aa21.35■■□□□ 1.01
SF3B2-211ENST00000531041 C20orf194Q5TEA3 1177 aa21.35■■□□□ 1.01
SF3B2-211ENST00000531041 BRIP1Q9BX63 1249 aa21.35■■□□□ 1.01
SF3B2-211ENST00000531041 ABCC12Q96J65 1359 aa21.35■■□□□ 1.01
SF3B2-211ENST00000531041 HSP90B1P14625 803 aaKnown RBP21.34■■□□□ 1.01
SF3B2-211ENST00000531041 RTL5Q5HYW3 569 aaPredicted RBP21.34■■□□□ 1.01
SF3B2-211ENST00000531041 ITPRIPQ8IWB1 547 aa21.34■■□□□ 1.01
SF3B2-211ENST00000531041 CCDC24Q8N4L8 307 aa21.34■■□□□ 1.01
SF3B2-211ENST00000531041 JARID2Q92833 1246 aaPredicted RBP21.34■■□□□ 1.01
SF3B2-211ENST00000531041 COL11A2P13942 1736 aaPredicted RBP21.33■■□□□ 1.01
SF3B2-211ENST00000531041 IRS4O14654 1257 aaPredicted RBP21.33■■□□□ 1.01
SF3B2-211ENST00000531041 NBPF7P0C2Y1 421 aaPredicted RBP21.33■■□□□ 1.01
SF3B2-211ENST00000531041 MVPQ14764 893 aaKnown RBP21.33■■□□□ 1.01
SF3B2-211ENST00000531041 COG6Q9Y2V7 657 aa21.32■■□□□ 1
SF3B2-211ENST00000531041 CD2APQ9Y5K6 639 aa21.32■■□□□ 1
SF3B2-211ENST00000531041 BRCA1P38398 1863 aaKnown RBP21.32■■□□□ 1
SF3B2-211ENST00000531041 CACNA1SQ13698 1873 aa21.31■■□□□ 1
SF3B2-211ENST00000531041 HCLS1P14317 486 aaPredicted RBP21.31■■□□□ 1
SF3B2-211ENST00000531041 MEIS3Q99687 375 aa21.31■■□□□ 1
SF3B2-211ENST00000531041 PLA2G12BQ9BX93 195 aa21.31■■□□□ 1
SF3B2-211ENST00000531041 KLRG2A4D1S0 409 aaPredicted RBP21.3■■□□□ 1
SF3B2-211ENST00000531041 ZBTB7BO15156 539 aaPredicted RBP21.3■■□□□ 1
SF3B2-211ENST00000531041 PDE8AO60658 829 aa21.3■■□□□ 1
SF3B2-211ENST00000531041 GNAI3P08754 354 aa21.3■■□□□ 1
SF3B2-211ENST00000531041 PDE6BP35913 854 aa21.3■■□□□ 1
SF3B2-211ENST00000531041 NLRP3Q96P20 1036 aa21.3■■□□□ 1
SF3B2-211ENST00000531041 PPP1R1BQ9UD71 204 aaPredicted RBP21.3■■□□□ 1
SF3B2-211ENST00000531041 DDX19BQ9UMR2 479 aa21.3■■□□□ 1
SF3B2-211ENST00000531041 TAF1P21675 1872 aa21.3■■□□□ 1
SF3B2-211ENST00000531041 UBTFL1P0CB47 393 aaPredicted RBP21.29■■□□□ 1
SF3B2-211ENST00000531041 PDZRN3Q9UPQ7 1066 aa21.29■■□□□ 1
SF3B2-211ENST00000531041 HDAC5Q9UQL6 1122 aa21.29■■□□□ 1
SF3B2-211ENST00000531041 TGFB2P61812 414 aa21.28■■□□□ 1
SF3B2-211ENST00000531041 CHMP4BQ9H444 224 aaKnown RBP21.28■■□□□ 1
SF3B2-211ENST00000531041 SF3B3Q15393 1217 aaKnown RBP21.27■■□□□ 1
SF3B2-211ENST00000531041 CRY2Q49AN0 593 aa21.27■■□□□ 1
SF3B2-211ENST00000531041 KAZALD1Q96I82 304 aa21.27■■□□□ 1
SF3B2-211ENST00000531041 SUCLG2Q96I99 432 aa21.27■■□□□ 1
SF3B2-211ENST00000531041 FHDC1Q9C0D6 1143 aaPredicted RBP21.27■■□□□ 1
SF3B2-211ENST00000531041 CTSWP56202 376 aa21.26■□□□□ 0.99
SF3B2-211ENST00000531041 FOXO4P98177 505 aa21.26■□□□□ 0.99
SF3B2-211ENST00000531041 C3orf67Q6ZVT6 689 aa21.26■□□□□ 0.99
SF3B2-211ENST00000531041 H0YIN7 160 aa21.25■□□□□ 0.99
SF3B2-211ENST00000531041 SRGNP10124 158 aa21.25■□□□□ 0.99
SF3B2-211ENST00000531041 EPHA10Q5JZY3 1008 aa21.25■□□□□ 0.99
SF3B2-211ENST00000531041 KLHL34Q8N239 644 aa21.25■□□□□ 0.99
SF3B2-211ENST00000531041 CSF1RP07333 972 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms