RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 FERMT2Q96AC1 680 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 CRACR2AQ9BSW2 395 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 CABP5Q9NP86 173 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 TCP11L1Q9NUJ3 509 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 RFC4P35249 363 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 LDHAL6AQ6ZMR3 332 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 CCDC144CPQ8IYA2 1237 aa9.78□□□□□ -0.84
CTNND1-227ENST00000530748 CGNQ9P2M7 1197 aaKnown RBP9.78□□□□□ -0.84
CTNND1-227ENST00000530748 TSPY2A6NKD2 308 aa9.77□□□□□ -0.84
CTNND1-227ENST00000530748 PPM1FP49593 454 aaPredicted RBP9.77□□□□□ -0.84
CTNND1-227ENST00000530748 KIF18AQ8NI77 898 aa9.77□□□□□ -0.84
CTNND1-227ENST00000530748 NGLY1Q96IV0 654 aa9.77□□□□□ -0.84
CTNND1-227ENST00000530748 FAM83GA6ND36 823 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 C6orf229H3BNL8 230 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 CEBPAP49715 358 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-227ENST00000530748 TMEM87AQ8NBN3 555 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 PKNOX2Q96KN3 472 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 MPHOSPH6Q99547 160 aaKnown RBP9.77□□□□□ -0.85
CTNND1-227ENST00000530748 ZNF518AQ6AHZ1 1483 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 ATP5J2-PTCD1G3V325 749 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 GCOM1H8Y6P7 765 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-227ENST00000530748 MYZAPP0CAP1 466 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 IBSPP21815 317 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-227ENST00000530748 MTIF2P46199 727 aaKnown RBP9.77□□□□□ -0.85
CTNND1-227ENST00000530748 ANAPC15P60006 121 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 HDAC1Q13547 482 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-227ENST00000530748 CCDC82Q8N4S0 544 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 PLCD4Q9BRC7 762 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 SLC26A6Q9BXS9 759 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 SHTN1A0MZ66 631 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 A2MP01023 1474 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 ZGPATQ8N5A5 531 aaKnown RBP9.77□□□□□ -0.85
CTNND1-227ENST00000530748 ZSCAN16Q9H4T2 348 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-227ENST00000530748 RMND1Q9NWS8 449 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 ZNF608Q9ULD9 1512 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-227ENST00000530748 PPP4R3BQ5MIZ7 849 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
CTNND1-227ENST00000530748 CETN1Q12798 172 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 UVSSAQ2YD98 709 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 LUZP1Q86V48 1076 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 PI4KAP2A4QPH2 592 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 SPDYE4A6NLX3 237 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 MCM5P33992 734 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 KIF4BQ2VIQ3 1234 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 CCDC40Q4G0X9 1142 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 CKAP2LQ8IYA6 745 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 PI4KAP1Q8N8J0 262 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 CHPF2Q9P2E5 772 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 AKAP4Q5JQC9 854 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 TMC6Q7Z403 805 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 CNNM2Q9H8M5 875 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 ZNF219Q9P2Y4 722 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-227ENST00000530748 KIAA0556O60303 1618 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 MAP2K1Q02750 393 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-227ENST00000530748 TDRD12Q587J7 1177 aaKnown RBP9.76□□□□□ -0.85
CTNND1-227ENST00000530748 DYDC1Q8WWB3 177 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 UNC13AQ9UPW8 1703 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 UHRF1BP1LA0JNW5 1464 aa9.76□□□□□ -0.85
CTNND1-227ENST00000530748 ZFYP08048 801 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-227ENST00000530748 USP8P40818 1118 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 UBE3BQ7Z3V4 1068 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 MRPL50Q8N5N7 158 aaKnown RBP9.75□□□□□ -0.85
CTNND1-227ENST00000530748 ZFYVE9O95405 1425 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 WDR7Q9Y4E6 1490 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 GOLGA6L9A6NEM1 432 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 UBE2HP62256 183 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 TAF3Q5VWG9 929 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 ANKRD13DQ6ZTN6 518 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 ZCRB1Q8TBF4 217 aaKnown RBP9.75□□□□□ -0.85
CTNND1-227ENST00000530748 LARP6Q9BRS8 491 aaKnown RBP9.75□□□□□ -0.85
CTNND1-227ENST00000530748 EXOC1Q9NV70 894 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 MYO1BO43795 1136 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 KIF21AQ7Z4S6 1674 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 PRAG1Q86YV5 1406 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 URI1O94763 535 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-227ENST00000530748 IGHDP01880 384 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 TSPY3P0CV98 308 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 TSPY8P0CW00 308 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 CHMP4BP1P59074 171 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 WTAPQ15007 396 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 RHPN1Q8TCX5 695 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 ORC3Q9UBD5 711 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-227ENST00000530748 ASXL2Q76L83 1435 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 IFFO1Q0D2I5 559 aa9.75□□□□□ -0.85
CTNND1-227ENST00000530748 LIG1P18858 919 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 PAFAH1B1P43034 410 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 HAND2P61296 217 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 NBPF6Q5VWK0 638 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 CADPS2Q86UW7 1296 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 NBPF5PQ86XG9 351 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-227ENST00000530748 NBPF4Q96M43 638 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 ALDH1L1O75891 902 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 CPLX3Q8WVH0 158 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 CTNNBL1Q8WYA6 563 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-227ENST00000530748 FEZ1Q99689 392 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 NAA15Q9BXJ9 866 aaKnown RBP9.74□□□□□ -0.85
CTNND1-227ENST00000530748 VAT1LQ9HCJ6 419 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 INCENPQ9NQS7 918 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 SLC4A4Q9Y6R1 1079 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 ZSCAN22P10073 491 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms