RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 BTAF1O14981 1849 aa11.31□□□□□ -0.6
POLB-216ENST00000530566 KCNQ4P56696 695 aa11.31□□□□□ -0.6
POLB-216ENST00000530566 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
POLB-216ENST00000530566 WDR17Q8IZU2 1322 aa11.31□□□□□ -0.6
POLB-216ENST00000530566 ARHGAP27Q6ZUM4 889 aa11.3□□□□□ -0.6
POLB-216ENST00000530566 NLRP13Q86W25 1043 aa11.3□□□□□ -0.6
POLB-216ENST00000530566 PLEKHG2Q9H7P9 1386 aa11.29□□□□□ -0.6
POLB-216ENST00000530566 C10orf71Q711Q0 1435 aa11.29□□□□□ -0.6
POLB-216ENST00000530566 TRPM1Q7Z4N2 1603 aa11.29□□□□□ -0.6
POLB-216ENST00000530566 WASLO00401 505 aaPredicted RBP11.29□□□□□ -0.6
POLB-216ENST00000530566 DXOO77932 396 aaKnown RBP11.29□□□□□ -0.6
POLB-216ENST00000530566 LBX1P52954 281 aa11.29□□□□□ -0.6
POLB-216ENST00000530566 RGL3Q3MIN7 710 aa11.29□□□□□ -0.6
POLB-216ENST00000530566 PIK3C2GO75747 1445 aa11.28□□□□□ -0.6
POLB-216ENST00000530566 TNRC18O15417 2968 aaPredicted RBP11.28□□□□□ -0.6
POLB-216ENST00000530566 CSB-PGBD3P0DP91 1061 aa11.28□□□□□ -0.6
POLB-216ENST00000530566 CARD10Q9BWT7 1032 aa11.28□□□□□ -0.6
POLB-216ENST00000530566 MKRN1Q9UHC7 482 aaKnown RBP11.28□□□□□ -0.6
POLB-216ENST00000530566 KCPQ6ZWJ8 1503 aa11.28□□□□□ -0.6
POLB-216ENST00000530566 TRIM32Q13049 653 aa11.27□□□□□ -0.61
POLB-216ENST00000530566 C9orf131Q5VYM1 1079 aa11.27□□□□□ -0.61
POLB-216ENST00000530566 TOR4AQ9NXH8 423 aa11.27□□□□□ -0.61
POLB-216ENST00000530566 PXDNLA1KZ92 1463 aa11.26□□□□□ -0.61
POLB-216ENST00000530566 C14orf93Q9H972 538 aaKnown RBP11.26□□□□□ -0.61
POLB-216ENST00000530566 BCS1LQ9Y276 419 aa11.26□□□□□ -0.61
POLB-216ENST00000530566 PIK3C2AO00443 1686 aa11.25□□□□□ -0.61
POLB-216ENST00000530566 TTC24A2A3L6 582 aaPredicted RBP11.25□□□□□ -0.61
POLB-216ENST00000530566 WNT7AO00755 349 aa11.25□□□□□ -0.61
POLB-216ENST00000530566 CRIPAKQ8N1N5 446 aa11.25□□□□□ -0.61
POLB-216ENST00000530566 CCDC24Q8N4L8 307 aa11.25□□□□□ -0.61
POLB-216ENST00000530566 HLA-CQ95604 372 aa11.25□□□□□ -0.61
POLB-216ENST00000530566 AAASQ9NRG9 546 aa11.25□□□□□ -0.61
POLB-216ENST00000530566 NUDT16Q96DE0 195 aaKnown RBP11.24□□□□□ -0.61
POLB-216ENST00000530566 ACEP12821 1306 aa11.24□□□□□ -0.61
POLB-216ENST00000530566 TNRC6CQ9HCJ0 1690 aaKnown RBP11.24□□□□□ -0.61
POLB-216ENST00000530566 ITSN1Q15811 1721 aa11.23□□□□□ -0.61
POLB-216ENST00000530566 AVPP01185 164 aa11.23□□□□□ -0.61
POLB-216ENST00000530566 TTLL12Q14166 644 aaPredicted RBP11.23□□□□□ -0.61
POLB-216ENST00000530566 CTC1Q2NKJ3 1217 aa11.23□□□□□ -0.61
POLB-216ENST00000530566 CFAP70Q5T0N1 1121 aa11.23□□□□□ -0.61
POLB-216ENST00000530566 FLAD1Q8NFF5 587 aa11.23□□□□□ -0.61
POLB-216ENST00000530566 REPIN1Q9BWE0 567 aaKnown RBP11.23□□□□□ -0.61
POLB-216ENST00000530566 CCNL1Q9UK58 526 aaPredicted RBP11.23□□□□□ -0.61
POLB-216ENST00000530566 ABCC6O95255 1503 aa11.23□□□□□ -0.61
POLB-216ENST00000530566 ZMYND10O75800 440 aa11.22□□□□□ -0.61
POLB-216ENST00000530566 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
POLB-216ENST00000530566 RETREG3Q86VR2 466 aa11.22□□□□□ -0.61
POLB-216ENST00000530566 SNIP1Q8TAD8 396 aaKnown RBP11.22□□□□□ -0.61
POLB-216ENST00000530566 CCDC7Q96M83 1385 aa11.22□□□□□ -0.61
POLB-216ENST00000530566 PPIP5K1Q6PFW1 1433 aa11.21□□□□□ -0.61
POLB-216ENST00000530566 POLR3AO14802 1390 aaPredicted RBP11.21□□□□□ -0.61
POLB-216ENST00000530566 ST8SIA5O15466 376 aa11.21□□□□□ -0.61
POLB-216ENST00000530566 JUNDP17535 347 aa11.21□□□□□ -0.61
POLB-216ENST00000530566 ITGAEP38570 1179 aa11.21□□□□□ -0.61
POLB-216ENST00000530566 GUCA2AQ02747 115 aa11.21□□□□□ -0.61
POLB-216ENST00000530566 SYTL4Q96C24 671 aaPredicted RBP11.21□□□□□ -0.61
POLB-216ENST00000530566 AXIN1O15169 862 aa11.2□□□□□ -0.62
POLB-216ENST00000530566 FDX1P10109 184 aa11.2□□□□□ -0.62
POLB-216ENST00000530566 VEGFAP15692 232 aaPredicted RBP11.2□□□□□ -0.62
POLB-216ENST00000530566 AMHR2Q16671 573 aa11.2□□□□□ -0.62
POLB-216ENST00000530566 ZNF775Q96BV0 537 aaPredicted RBP11.2□□□□□ -0.62
POLB-216ENST00000530566 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
POLB-216ENST00000530566 TRAK1Q9UPV9 953 aa11.2□□□□□ -0.62
POLB-216ENST00000530566 HSPA8P11142 646 aaKnown RBP11.19□□□□□ -0.62
POLB-216ENST00000530566 ZC3H15Q8WU90 426 aaKnown RBP11.19□□□□□ -0.62
POLB-216ENST00000530566 KAT6BQ8WYB5 2073 aa11.18□□□□□ -0.62
POLB-216ENST00000530566 PKD1L3Q7Z443 1732 aa11.18□□□□□ -0.62
POLB-216ENST00000530566 CNTNAP1P78357 1384 aa11.18□□□□□ -0.62
POLB-216ENST00000530566 C6orf229H3BNL8 230 aa11.18□□□□□ -0.62
POLB-216ENST00000530566 WNT7BP56706 349 aa11.18□□□□□ -0.62
POLB-216ENST00000530566 PRPF38BQ5VTL8 546 aaKnown RBP11.18□□□□□ -0.62
POLB-216ENST00000530566 COL18A1P39060 1754 aa11.18□□□□□ -0.62
POLB-216ENST00000530566 A0A0G2JLW4 131 aa11.17□□□□□ -0.62
POLB-216ENST00000530566 IL2RBP14784 551 aa11.17□□□□□ -0.62
POLB-216ENST00000530566 SMCPP49901 116 aaPredicted RBP11.17□□□□□ -0.62
POLB-216ENST00000530566 TGFB2P61812 414 aa11.17□□□□□ -0.62
POLB-216ENST00000530566 SYMPKQ92797 1274 aaKnown RBP11.17□□□□□ -0.62
POLB-216ENST00000530566 MRGPRX2Q96LB1 330 aa11.17□□□□□ -0.62
POLB-216ENST00000530566 SPATA31E1Q6ZUB1 1445 aa11.17□□□□□ -0.62
POLB-216ENST00000530566 LY75O60449 1722 aa11.16□□□□□ -0.62
POLB-216ENST00000530566 NUDT12Q9BQG2 462 aa11.16□□□□□ -0.62
POLB-216ENST00000530566 CPSF1Q10570 1443 aaKnown RBP11.16□□□□□ -0.62
POLB-216ENST00000530566 PLEKHG3A1L390 1219 aa11.15□□□□□ -0.62
POLB-216ENST00000530566 POTECB2RU33 542 aa11.15□□□□□ -0.62
POLB-216ENST00000530566 HMGB2P26583 209 aaKnown RBP11.15□□□□□ -0.62
POLB-216ENST00000530566 VEGFBP49765 207 aa11.15□□□□□ -0.62
POLB-216ENST00000530566 DIXDC1Q155Q3 683 aa11.15□□□□□ -0.62
POLB-216ENST00000530566 SPIRE2Q8WWL2 714 aa11.15□□□□□ -0.62
POLB-216ENST00000530566 RC3H1Q5TC82 1133 aaKnown RBP11.14□□□□□ -0.63
POLB-216ENST00000530566 GIGYF2Q6Y7W6 1299 aaKnown RBP11.14□□□□□ -0.63
POLB-216ENST00000530566 DDX54Q8TDD1 881 aaKnown RBP11.14□□□□□ -0.63
POLB-216ENST00000530566 SLIT3O75094 1523 aa11.14□□□□□ -0.63
POLB-216ENST00000530566 PDE4DIPQ5VU43 2346 aa11.13□□□□□ -0.63
POLB-216ENST00000530566 MS4A1P11836 297 aa11.13□□□□□ -0.63
POLB-216ENST00000530566 SMIM5Q71RC9 77 aa11.13□□□□□ -0.63
POLB-216ENST00000530566 ARHGEF25Q86VW2 580 aa11.13□□□□□ -0.63
POLB-216ENST00000530566 CDK19Q9BWU1 502 aa11.13□□□□□ -0.63
POLB-216ENST00000530566 NLRP2Q9NX02 1062 aa11.13□□□□□ -0.63
POLB-216ENST00000530566 PCDHGC3Q9UN70 934 aa11.13□□□□□ -0.63
POLB-216ENST00000530566 ANKRD36BQ8N2N9 1353 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms