RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 GCP02774 474 aa17.44■□□□□ 0.38
LRP5-206ENST00000529993 SLC5A1P13866 664 aa17.44■□□□□ 0.38
LRP5-206ENST00000529993 RBM25P49756 843 aaKnown RBP17.44■□□□□ 0.38
LRP5-206ENST00000529993 PTPN14Q15678 1187 aa17.44■□□□□ 0.38
LRP5-206ENST00000529993 RRP9O43818 475 aaKnown RBP17.44■□□□□ 0.38
LRP5-206ENST00000529993 CAVIN4Q5BKX8 364 aa17.44■□□□□ 0.38
LRP5-206ENST00000529993 HSP90AB3PQ58FF7 597 aa17.43■□□□□ 0.38
LRP5-206ENST00000529993 TANGO6Q9C0B7 1094 aa17.43■□□□□ 0.38
LRP5-206ENST00000529993 EXOC5O00471 708 aa17.42■□□□□ 0.38
LRP5-206ENST00000529993 F13A1P00488 732 aa17.42■□□□□ 0.38
LRP5-206ENST00000529993 PDCL2Q8N4E4 241 aa17.42■□□□□ 0.38
LRP5-206ENST00000529993 USP5P45974 858 aa17.42■□□□□ 0.38
LRP5-206ENST00000529993 DHX8Q14562 1220 aaKnown RBP17.42■□□□□ 0.38
LRP5-206ENST00000529993 Q6ZUG5 572 aa17.42■□□□□ 0.38
LRP5-206ENST00000529993 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
LRP5-206ENST00000529993 KLF18A0A0U1RQI7 1052 aa17.42■□□□□ 0.38
LRP5-206ENST00000529993 TMEM67Q5HYA8 995 aa17.42■□□□□ 0.38
LRP5-206ENST00000529993 CHST3Q7LGC8 479 aa17.42■□□□□ 0.38
LRP5-206ENST00000529993 CADPS2Q86UW7 1296 aa17.42■□□□□ 0.38
LRP5-206ENST00000529993 AK7Q96M32 723 aa17.42■□□□□ 0.38
LRP5-206ENST00000529993 IARSP41252 1262 aaKnown RBP17.41■□□□□ 0.38
LRP5-206ENST00000529993 RBM5P52756 815 aaKnown RBP eCLIP17.41■□□□□ 0.385e-6■■□□□ 12.3
LRP5-206ENST00000529993 CT47A1Q5JQC4 288 aaPredicted RBP17.41■□□□□ 0.38
LRP5-206ENST00000529993 ZNF652Q9Y2D9 606 aa17.41■□□□□ 0.38
LRP5-206ENST00000529993 CNNM3Q8NE01 707 aa17.41■□□□□ 0.38
LRP5-206ENST00000529993 DEF6Q9H4E7 631 aa17.41■□□□□ 0.38
LRP5-206ENST00000529993 DACT1Q9NYF0 836 aa17.41■□□□□ 0.38
LRP5-206ENST00000529993 INSRP06213 1382 aa17.41■□□□□ 0.38
LRP5-206ENST00000529993 CCDC196A0A1B0GTZ2 297 aa17.41■□□□□ 0.38
LRP5-206ENST00000529993 CTAGE5O15320 804 aa17.41■□□□□ 0.38
LRP5-206ENST00000529993 ZCRB1Q8TBF4 217 aaKnown RBP17.41■□□□□ 0.38
LRP5-206ENST00000529993 LGR6Q9HBX8 967 aa17.41■□□□□ 0.38
LRP5-206ENST00000529993 MCMDC2Q4G0Z9 681 aa17.41■□□□□ 0.38
LRP5-206ENST00000529993 CEP131Q9UPN4 1083 aa17.41■□□□□ 0.38
LRP5-206ENST00000529993 TARBP1Q13395 1621 aaKnown RBP17.41■□□□□ 0.38
LRP5-206ENST00000529993 SKIDA1Q1XH10 827 aa17.4■□□□□ 0.38
LRP5-206ENST00000529993 ZSCAN29Q8IWY8 852 aaPredicted RBP17.4■□□□□ 0.38
LRP5-206ENST00000529993 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
LRP5-206ENST00000529993 MKNK2Q9HBH9 465 aa17.4■□□□□ 0.38
LRP5-206ENST00000529993 EDC4Q6P2E9 1401 aaKnown RBP17.4■□□□□ 0.38
LRP5-206ENST00000529993 TNNT1P13805 278 aa17.4■□□□□ 0.38
LRP5-206ENST00000529993 SSRP1Q08945 709 aaKnown RBP17.4■□□□□ 0.38
LRP5-206ENST00000529993 NCOA7Q8NI08 942 aa17.4■□□□□ 0.38
LRP5-206ENST00000529993 IQSEC3Q9UPP2 1182 aaPredicted RBP17.4■□□□□ 0.38
LRP5-206ENST00000529993 SLC4A8Q2Y0W8 1093 aa17.4■□□□□ 0.38
LRP5-206ENST00000529993 CTCFLQ8NI51 663 aaPredicted RBP17.4■□□□□ 0.38
LRP5-206ENST00000529993 KLHDC4Q8TBB5 520 aa17.4■□□□□ 0.38
LRP5-206ENST00000529993 METAP2P50579 478 aaKnown RBP eCLIP17.39■□□□□ 0.385e-7■■■■■ 29.1
LRP5-206ENST00000529993 CREB3L3Q68CJ9 461 aa17.39■□□□□ 0.38
LRP5-206ENST00000529993 IQCA1Q86XH1 822 aa17.39■□□□□ 0.38
LRP5-206ENST00000529993 TTC41PQ6P2S7 1318 aa17.39■□□□□ 0.37
LRP5-206ENST00000529993 IP6K1Q92551 441 aa17.39■□□□□ 0.37
LRP5-206ENST00000529993 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
LRP5-206ENST00000529993 TFCP2Q12800 502 aa17.39■□□□□ 0.37
LRP5-206ENST00000529993 TOP1P11387 765 aaKnown RBP17.38■□□□□ 0.37
LRP5-206ENST00000529993 UBXN4Q92575 508 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 SLC26A6Q9BXS9 759 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 CLCN1P35523 988 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 KDM5CP41229 1560 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 STX1AQ16623 288 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 DZIP1Q86YF9 867 aaKnown RBP17.38■□□□□ 0.37
LRP5-206ENST00000529993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.38■□□□□ 0.37
LRP5-206ENST00000529993 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 USP19O94966 1318 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 MCM5P33992 734 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 CPLX3Q8WVH0 158 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 TTC12Q9H892 705 aaPredicted RBP17.38■□□□□ 0.37
LRP5-206ENST00000529993 EPB41L2O43491 1005 aaKnown RBP17.38■□□□□ 0.37
LRP5-206ENST00000529993 ATP2B3Q16720 1220 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 ANO6Q4KMQ2 910 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 ARHGAP29Q52LW3 1261 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 TMC6Q7Z403 805 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 ATP10AO60312 1499 aa17.38■□□□□ 0.37
LRP5-206ENST00000529993 ZPR1O75312 459 aa17.37■□□□□ 0.37
LRP5-206ENST00000529993 NBPF7P0C2Y1 421 aaPredicted RBP17.37■□□□□ 0.37
LRP5-206ENST00000529993 EIF5P55010 431 aaKnown RBP17.37■□□□□ 0.37
LRP5-206ENST00000529993 NOM1Q5C9Z4 860 aaKnown RBP17.37■□□□□ 0.37
LRP5-206ENST00000529993 TMX1Q9H3N1 280 aa17.37■□□□□ 0.37
LRP5-206ENST00000529993 ADGBQ8N7X0 1667 aa17.37■□□□□ 0.37
LRP5-206ENST00000529993 ERCC4Q92889 916 aaPredicted RBP17.37■□□□□ 0.37
LRP5-206ENST00000529993 PATL2C9JE40 543 aaKnown RBP17.37■□□□□ 0.37
LRP5-206ENST00000529993 URI1O94763 535 aaPredicted RBP17.37■□□□□ 0.37
LRP5-206ENST00000529993 KIF18AQ8NI77 898 aa17.37■□□□□ 0.37
LRP5-206ENST00000529993 TEX13AQ9BXU3 409 aaPredicted RBP17.37■□□□□ 0.37
LRP5-206ENST00000529993 ZSCAN16Q9H4T2 348 aaPredicted RBP17.37■□□□□ 0.37
LRP5-206ENST00000529993 SYT1P21579 422 aa17.36■□□□□ 0.37
LRP5-206ENST00000529993 UVSSAQ2YD98 709 aa17.36■□□□□ 0.37
LRP5-206ENST00000529993 KAT6BQ8WYB5 2073 aa17.36■□□□□ 0.37
LRP5-206ENST00000529993 IL15P40933 162 aaPredicted RBP17.36■□□□□ 0.37
LRP5-206ENST00000529993 TTF1Q15361 905 aaPredicted RBP17.36■□□□□ 0.37
LRP5-206ENST00000529993 ZFYVE27Q5T4F4 411 aa17.36■□□□□ 0.37
LRP5-206ENST00000529993 TRMT2AQ8IZ69 625 aaKnown RBP17.36■□□□□ 0.37
LRP5-206ENST00000529993 RNF41Q9H4P4 317 aaPredicted RBP17.36■□□□□ 0.37
LRP5-206ENST00000529993 PAG1Q9NWQ8 432 aa17.36■□□□□ 0.37
LRP5-206ENST00000529993 TBX22Q9Y458 520 aa17.36■□□□□ 0.37
LRP5-206ENST00000529993 CBX1P83916 185 aa17.36■□□□□ 0.37
LRP5-206ENST00000529993 AXDND1Q5T1B0 1012 aaPredicted RBP17.36■□□□□ 0.37
LRP5-206ENST00000529993 PRDM10Q9NQV6 1147 aa17.36■□□□□ 0.37
LRP5-206ENST00000529993 MFSD6Q6ZSS7 791 aa17.35■□□□□ 0.37
LRP5-206ENST00000529993 DNAJC25Q9H1X3 360 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms