RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 ERFEQ4G0M1 354 aa10.2□□□□□ -0.78
CCDC90B-212ENST00000529312 GIGYF2Q6Y7W6 1299 aaKnown RBP10.2□□□□□ -0.78
CCDC90B-212ENST00000529312 TAOK3Q9H2K8 898 aa10.2□□□□□ -0.78
CCDC90B-212ENST00000529312 NMRK2Q9NPI5 230 aa10.2□□□□□ -0.78
CCDC90B-212ENST00000529312 CREBZFQ9NS37 354 aa10.2□□□□□ -0.78
CCDC90B-212ENST00000529312 LAS1LQ9Y4W2 734 aaKnown RBP10.2□□□□□ -0.78
CCDC90B-212ENST00000529312 LTBP3Q9NS15 1303 aa10.19□□□□□ -0.78
CCDC90B-212ENST00000529312 PRPF40BQ6NWY9 871 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-212ENST00000529312 CCDC146Q8IYE0 955 aa10.19□□□□□ -0.78
CCDC90B-212ENST00000529312 ZNF34Q8IZ26 560 aa10.19□□□□□ -0.78
CCDC90B-212ENST00000529312 NLRP3Q96P20 1036 aa10.19□□□□□ -0.78
CCDC90B-212ENST00000529312 SIPA1L3O60292 1781 aaPredicted RBP10.19□□□□□ -0.78
CCDC90B-212ENST00000529312 HOXB7P09629 217 aa10.18□□□□□ -0.78
CCDC90B-212ENST00000529312 CCDC93Q567U6 631 aa10.18□□□□□ -0.78
CCDC90B-212ENST00000529312 TTLL7Q6ZT98 887 aa10.18□□□□□ -0.78
CCDC90B-212ENST00000529312 SMC1BQ8NDV3 1235 aa10.18□□□□□ -0.78
CCDC90B-212ENST00000529312 RPGRQ92834 1020 aaKnown RBP10.18□□□□□ -0.78
CCDC90B-212ENST00000529312 RBM17Q96I25 401 aaKnown RBP10.18□□□□□ -0.78
CCDC90B-212ENST00000529312 CFAP44Q96MT7 982 aa10.18□□□□□ -0.78
CCDC90B-212ENST00000529312 UTP14AQ9BVJ6 771 aaKnown RBP10.18□□□□□ -0.78
CCDC90B-212ENST00000529312 ZBTB3Q9H5J0 574 aa10.18□□□□□ -0.78
CCDC90B-212ENST00000529312 DDX21Q9NR30 783 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC90B-212ENST00000529312 ARFGEF1Q9Y6D6 1849 aa10.17□□□□□ -0.78
CCDC90B-212ENST00000529312 NFKBIEO00221 500 aa10.17□□□□□ -0.78
CCDC90B-212ENST00000529312 HOXA10P31260 410 aaPredicted RBP10.17□□□□□ -0.78
CCDC90B-212ENST00000529312 GNAI1P63096 354 aa10.17□□□□□ -0.78
CCDC90B-212ENST00000529312 RASSF7Q02833 373 aa10.17□□□□□ -0.78
CCDC90B-212ENST00000529312 SLC10A5Q5PT55 438 aa10.17□□□□□ -0.78
CCDC90B-212ENST00000529312 COPS6Q7L5N1 327 aa10.17□□□□□ -0.78
CCDC90B-212ENST00000529312 C7orf43Q8WVR3 580 aa10.17□□□□□ -0.78
CCDC90B-212ENST00000529312 CRAMP1Q96RY5 1269 aa10.17□□□□□ -0.78
CCDC90B-212ENST00000529312 TRIM35Q9UPQ4 493 aa10.17□□□□□ -0.78
CCDC90B-212ENST00000529312 UTRNP46939 3433 aa10.17□□□□□ -0.78
CCDC90B-212ENST00000529312 GPTP24298 496 aa10.16□□□□□ -0.78
CCDC90B-212ENST00000529312 FKBP4Q02790 459 aaKnown RBP eCLIP10.16□□□□□ -0.78
CCDC90B-212ENST00000529312 AIMP1Q12904 312 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-212ENST00000529312 TCIRG1Q13488 830 aa10.16□□□□□ -0.78
CCDC90B-212ENST00000529312 PDIA6Q15084 440 aa10.16□□□□□ -0.78
CCDC90B-212ENST00000529312 SUSD4Q5VX71 490 aa10.16□□□□□ -0.78
CCDC90B-212ENST00000529312 JDP2Q8WYK2 163 aa10.16□□□□□ -0.78
CCDC90B-212ENST00000529312 HYPKQ9NX55 129 aa10.16□□□□□ -0.78
CCDC90B-212ENST00000529312 DBF4Q9UBU7 674 aaPredicted RBP10.16□□□□□ -0.78
CCDC90B-212ENST00000529312 AFDNP55196 1824 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-212ENST00000529312 NRXN2Q9P2S2 1712 aa10.16□□□□□ -0.78
CCDC90B-212ENST00000529312 RNF123Q5XPI4 1314 aa10.15□□□□□ -0.78
CCDC90B-212ENST00000529312 APAF1O14727 1248 aa10.15□□□□□ -0.78
CCDC90B-212ENST00000529312 BBOX1O75936 387 aa10.15□□□□□ -0.78
CCDC90B-212ENST00000529312 HSP90B1P14625 803 aaKnown RBP10.15□□□□□ -0.78
CCDC90B-212ENST00000529312 CRY2Q49AN0 593 aa10.15□□□□□ -0.78
CCDC90B-212ENST00000529312 ANKRD13DQ6ZTN6 518 aa10.15□□□□□ -0.78
CCDC90B-212ENST00000529312 NUTM1Q86Y26 1132 aa10.15□□□□□ -0.78
CCDC90B-212ENST00000529312 SYNE4Q8N205 404 aa10.15□□□□□ -0.78
CCDC90B-212ENST00000529312 VPS33BQ9H267 617 aa10.15□□□□□ -0.78
CCDC90B-212ENST00000529312 KIAA1551Q9HCM1 1747 aa10.15□□□□□ -0.78
CCDC90B-212ENST00000529312 IQCA1LA6NCM1 817 aa10.14□□□□□ -0.79
CCDC90B-212ENST00000529312 HDGFL1Q5TGJ6 251 aa10.14□□□□□ -0.79
CCDC90B-212ENST00000529312 PLBD2Q8NHP8 589 aa10.14□□□□□ -0.79
CCDC90B-212ENST00000529312 XAGE3Q8WTP9 111 aa10.14□□□□□ -0.79
CCDC90B-212ENST00000529312 NECTIN2Q92692 538 aa10.14□□□□□ -0.79
CCDC90B-212ENST00000529312 PSMD1Q99460 953 aa10.14□□□□□ -0.79
CCDC90B-212ENST00000529312 IFT57Q9NWB7 429 aa10.14□□□□□ -0.79
CCDC90B-212ENST00000529312 BRCA1P38398 1863 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-212ENST00000529312 IBTKQ9P2D0 1353 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-212ENST00000529312 ZNF316A6NFI3 1004 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-212ENST00000529312 ANP32CO43423 234 aa10.13□□□□□ -0.79
CCDC90B-212ENST00000529312 PRELPP51888 382 aa10.13□□□□□ -0.79
CCDC90B-212ENST00000529312 DUSP27Q5VZP5 1158 aa10.13□□□□□ -0.79
CCDC90B-212ENST00000529312 SUPT20HQ8NEM7 779 aa10.13□□□□□ -0.79
CCDC90B-212ENST00000529312 TRMT112Q9UI30 125 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-212ENST00000529312 NTSR2O95665 410 aa10.12□□□□□ -0.79
CCDC90B-212ENST00000529312 ZNF853P0CG23 659 aa10.12□□□□□ -0.79
CCDC90B-212ENST00000529312 IARSP41252 1262 aaKnown RBP10.12□□□□□ -0.79
CCDC90B-212ENST00000529312 EIF6P56537 245 aaKnown RBP10.12□□□□□ -0.79
CCDC90B-212ENST00000529312 TRIM28Q13263 835 aaKnown RBP10.12□□□□□ -0.79
CCDC90B-212ENST00000529312 DDX46Q7L014 1031 aaKnown RBP10.12□□□□□ -0.79
CCDC90B-212ENST00000529312 TMC4Q7Z404 712 aa10.12□□□□□ -0.79
CCDC90B-212ENST00000529312 LRP10Q7Z4F1 713 aa10.12□□□□□ -0.79
CCDC90B-212ENST00000529312 NLRP10Q86W26 655 aa10.12□□□□□ -0.79
CCDC90B-212ENST00000529312 DLG5Q8TDM6 1919 aa10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 SH3TC1Q8TE82 1336 aa10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 SBF1O95248 1867 aa10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 DDNO94850 711 aaPredicted RBP10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 DDX58O95786 925 aaKnown RBP10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 ANXA1P04083 346 aa10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 PROSER3Q2NL68 480 aa10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 CCDC30Q5VVM6 783 aa10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 MAMSTRQ6ZN01 415 aa10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 RIC3Q7Z5B4 369 aa10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 PNMA8AQ86V59 439 aaPredicted RBP10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 SP8Q8IXZ3 490 aa10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 ZNF277Q9NRM2 450 aaPredicted RBP10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 MBIPQ9NS73 344 aa10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 CHPF2Q9P2E5 772 aa10.11□□□□□ -0.79
CCDC90B-212ENST00000529312 UBN2Q6ZU65 1347 aa10.1□□□□□ -0.79
CCDC90B-212ENST00000529312 POTECB2RU33 542 aa10.1□□□□□ -0.79
CCDC90B-212ENST00000529312 FZD9O00144 591 aa10.1□□□□□ -0.79
CCDC90B-212ENST00000529312 GOLGA2Q08379 1002 aa10.1□□□□□ -0.79
CCDC90B-212ENST00000529312 CCDC27Q2M243 656 aa10.1□□□□□ -0.79
CCDC90B-212ENST00000529312 LARGE2Q8N3Y3 721 aa10.1□□□□□ -0.79
CCDC90B-212ENST00000529312 DNAJC5GQ8N7S2 189 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 210.9 ms