RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 ATP8B2P98198 1209 aa12.55□□□□□ -0.4
RPS3-210ENST00000528439 TRIM28Q13263 835 aaKnown RBP12.55□□□□□ -0.4
RPS3-210ENST00000528439 MTX1Q13505 466 aa12.55□□□□□ -0.4
RPS3-210ENST00000528439 POLA2Q14181 598 aa12.55□□□□□ -0.4
RPS3-210ENST00000528439 TXNRD1Q16881 649 aa12.55□□□□□ -0.4
RPS3-210ENST00000528439 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
RPS3-210ENST00000528439 PPP1R42Q7Z4L9 355 aa12.55□□□□□ -0.4
RPS3-210ENST00000528439 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
RPS3-210ENST00000528439 CCDC191Q8NCU4 936 aa12.55□□□□□ -0.4
RPS3-210ENST00000528439 H7C1W4 665 aa12.54□□□□□ -0.4
RPS3-210ENST00000528439 SOCS7O14512 581 aa12.54□□□□□ -0.4
RPS3-210ENST00000528439 PDE4AP27815 886 aa12.54□□□□□ -0.4
RPS3-210ENST00000528439 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
RPS3-210ENST00000528439 ZNF34Q8IZ26 560 aa12.54□□□□□ -0.4
RPS3-210ENST00000528439 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
RPS3-210ENST00000528439 DCTPP1Q9H773 170 aa12.54□□□□□ -0.4
RPS3-210ENST00000528439 BCL2L12Q9HB09 334 aa12.54□□□□□ -0.4
RPS3-210ENST00000528439 SRP68Q9UHB9 627 aaKnown RBP12.54□□□□□ -0.4
RPS3-210ENST00000528439 LAMB2P55268 1798 aa12.53□□□□□ -0.4
RPS3-210ENST00000528439 PLSCR1O15162 318 aa12.53□□□□□ -0.4
RPS3-210ENST00000528439 NUCB1Q02818 461 aa12.53□□□□□ -0.4
RPS3-210ENST00000528439 HSP90AB3PQ58FF7 597 aa12.53□□□□□ -0.4
RPS3-210ENST00000528439 DDX60Q8IY21 1712 aaKnown RBP12.53□□□□□ -0.4
RPS3-210ENST00000528439 SRGAP3O43295 1099 aa12.52□□□□□ -0.41
RPS3-210ENST00000528439 FOXO4P98177 505 aa12.52□□□□□ -0.41
RPS3-210ENST00000528439 ZNF827Q17R98 1081 aa12.52□□□□□ -0.41
RPS3-210ENST00000528439 RABL6Q3YEC7 729 aaPredicted RBP12.52□□□□□ -0.41
RPS3-210ENST00000528439 DEFB132Q7Z7B7 95 aa12.52□□□□□ -0.41
RPS3-210ENST00000528439 SYNE4Q8N205 404 aa12.52□□□□□ -0.41
RPS3-210ENST00000528439 GCC1Q96CN9 775 aa12.52□□□□□ -0.41
RPS3-210ENST00000528439 AK7Q96M32 723 aa12.52□□□□□ -0.41
RPS3-210ENST00000528439 RTCBQ9Y3I0 505 aaKnown RBP12.52□□□□□ -0.41
RPS3-210ENST00000528439 HMMRO75330 724 aa12.51□□□□□ -0.41
RPS3-210ENST00000528439 PHF14O94880 888 aa12.51□□□□□ -0.41
RPS3-210ENST00000528439 PCCAP05165 728 aaPredicted RBP12.51□□□□□ -0.41
RPS3-210ENST00000528439 RGS3P49796 1198 aa12.51□□□□□ -0.41
RPS3-210ENST00000528439 EN1Q05925 392 aaPredicted RBP12.51□□□□□ -0.41
RPS3-210ENST00000528439 NPM2Q86SE8 214 aaKnown RBP12.51□□□□□ -0.41
RPS3-210ENST00000528439 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
RPS3-210ENST00000528439 CAMKK2Q96RR4 588 aa12.51□□□□□ -0.41
RPS3-210ENST00000528439 LNPKQ9C0E8 428 aa12.51□□□□□ -0.41
RPS3-210ENST00000528439 EXOC6BQ9Y2D4 811 aa12.51□□□□□ -0.41
RPS3-210ENST00000528439 USP42Q9H9J4 1324 aaKnown RBP12.51□□□□□ -0.41
RPS3-210ENST00000528439 SUSD4Q5VX71 490 aa12.5□□□□□ -0.41
RPS3-210ENST00000528439 USPL1Q5W0Q7 1092 aa12.5□□□□□ -0.41
RPS3-210ENST00000528439 CHD1LQ86WJ1 897 aa12.5□□□□□ -0.41
RPS3-210ENST00000528439 ZBTB38Q8NAP3 1195 aaPredicted RBP12.5□□□□□ -0.41
RPS3-210ENST00000528439 AKT1S1Q96B36 256 aa12.5□□□□□ -0.41
RPS3-210ENST00000528439 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
RPS3-210ENST00000528439 NARFQ9UHQ1 456 aa12.5□□□□□ -0.41
RPS3-210ENST00000528439 PA2G4Q9UQ80 394 aaKnown RBP12.5□□□□□ -0.41
RPS3-210ENST00000528439 CASZ1Q86V15 1759 aa12.5□□□□□ -0.41
RPS3-210ENST00000528439 MYH3P11055 1940 aa12.49□□□□□ -0.41
RPS3-210ENST00000528439 LRP5O75197 1615 aa12.49□□□□□ -0.41
RPS3-210ENST00000528439 CDHR2Q9BYE9 1310 aa12.49□□□□□ -0.41
RPS3-210ENST00000528439 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.49□□□□□ -0.41
RPS3-210ENST00000528439 APBB1O00213 710 aa12.49□□□□□ -0.41
RPS3-210ENST00000528439 SMARCA5O60264 1052 aaPredicted RBP12.49□□□□□ -0.41
RPS3-210ENST00000528439 NTSR2O95665 410 aa12.49□□□□□ -0.41
RPS3-210ENST00000528439 RFX5P48382 616 aaPredicted RBP12.49□□□□□ -0.41
RPS3-210ENST00000528439 EZH2Q15910 746 aaKnown RBP12.49□□□□□ -0.41
RPS3-210ENST00000528439 ANKRD45Q5TZF3 282 aa12.49□□□□□ -0.41
RPS3-210ENST00000528439 TBC1D9BQ66K14 1250 aa12.49□□□□□ -0.41
RPS3-210ENST00000528439 NIP7Q9Y221 180 aaKnown RBP eCLIP12.49□□□□□ -0.419e-40■■■■□ 25.2
RPS3-210ENST00000528439 ABCC12Q96J65 1359 aa12.48□□□□□ -0.41
RPS3-210ENST00000528439 RGL2O15211 777 aa12.48□□□□□ -0.41
RPS3-210ENST00000528439 SSFA2P28290 1259 aa12.48□□□□□ -0.41
RPS3-210ENST00000528439 LMBR1LQ6UX01 489 aa12.48□□□□□ -0.41
RPS3-210ENST00000528439 CLEC4GQ6UXB4 293 aa12.48□□□□□ -0.41
RPS3-210ENST00000528439 KLHDC4Q8TBB5 520 aa12.48□□□□□ -0.41
RPS3-210ENST00000528439 OTUD7AQ8TE49 926 aaPredicted RBP12.48□□□□□ -0.41
RPS3-210ENST00000528439 PLA2G12BQ9BX93 195 aa12.48□□□□□ -0.41
RPS3-210ENST00000528439 ANO8Q9HCE9 1232 aaPredicted RBP12.48□□□□□ -0.41
RPS3-210ENST00000528439 HDAC5Q9UQL6 1122 aa12.48□□□□□ -0.41
RPS3-210ENST00000528439 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
RPS3-210ENST00000528439 COL4A1P02462 1669 aa12.48□□□□□ -0.41
RPS3-210ENST00000528439 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
RPS3-210ENST00000528439 FAM177BA6PVY3 158 aa12.47□□□□□ -0.41
RPS3-210ENST00000528439 PARP10Q53GL7 1025 aa12.47□□□□□ -0.41
RPS3-210ENST00000528439 TRMT112Q9UI30 125 aaKnown RBP12.47□□□□□ -0.41
RPS3-210ENST00000528439 NOP58Q9Y2X3 529 aaKnown RBP12.47□□□□□ -0.41
RPS3-210ENST00000528439 IRS4O14654 1257 aaPredicted RBP12.46□□□□□ -0.41
RPS3-210ENST00000528439 SURF6O75683 361 aaKnown RBP12.46□□□□□ -0.41
RPS3-210ENST00000528439 HMGB2P26583 209 aaKnown RBP12.46□□□□□ -0.41
RPS3-210ENST00000528439 FAM161AQ3B820 660 aa12.46□□□□□ -0.41
RPS3-210ENST00000528439 TRAPPC3LQ5T215 181 aa12.46□□□□□ -0.41
RPS3-210ENST00000528439 BICDL1Q6ZP65 573 aa12.46□□□□□ -0.41
RPS3-210ENST00000528439 C16orf71Q8IYS4 520 aaPredicted RBP12.46□□□□□ -0.41
RPS3-210ENST00000528439 UTP14AQ9BVJ6 771 aaKnown RBP12.46□□□□□ -0.41
RPS3-210ENST00000528439 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.46□□□□□ -0.41
RPS3-210ENST00000528439 QSER1Q2KHR3 1735 aa12.45□□□□□ -0.42
RPS3-210ENST00000528439 SH3TC1Q8TE82 1336 aa12.45□□□□□ -0.42
RPS3-210ENST00000528439 SALL3Q9BXA9 1300 aa12.45□□□□□ -0.42
RPS3-210ENST00000528439 ZPR1O75312 459 aa12.45□□□□□ -0.42
RPS3-210ENST00000528439 GYS1P13807 737 aa12.45□□□□□ -0.42
RPS3-210ENST00000528439 RFC4P35249 363 aa12.45□□□□□ -0.42
RPS3-210ENST00000528439 CTSWP56202 376 aa12.45□□□□□ -0.42
RPS3-210ENST00000528439 PTPN12Q05209 780 aaKnown RBP12.45□□□□□ -0.42
RPS3-210ENST00000528439 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
RPS3-210ENST00000528439 PNPLA7Q6ZV29 1317 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms