RNA–Protein interactions for RNA: ENST00000527921.1

CHD7-207, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 4

Gene CHD7, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-207ENST00000527921 PSMD1Q99460 953 aa15.85■□□□□ 0.13
CHD7-207ENST00000527921 TAF1DQ9H5J8 278 aaPredicted RBP15.85■□□□□ 0.13
CHD7-207ENST00000527921 IQCA1LA6NCM1 817 aa15.84■□□□□ 0.13
CHD7-207ENST00000527921 IARSP41252 1262 aaKnown RBP15.84■□□□□ 0.13
CHD7-207ENST00000527921 COL13A1Q5TAT6 717 aaPredicted RBP15.84■□□□□ 0.13
CHD7-207ENST00000527921 PASKQ96RG2 1323 aa15.84■□□□□ 0.13
CHD7-207ENST00000527921 CREBZFQ9NS37 354 aa15.83■□□□□ 0.12
CHD7-207ENST00000527921 ANXA1P04083 346 aa15.82■□□□□ 0.12
CHD7-207ENST00000527921 LDHDQ86WU2 507 aa15.82■□□□□ 0.12
CHD7-207ENST00000527921 CRAMP1Q96RY5 1269 aa15.82■□□□□ 0.12
CHD7-207ENST00000527921 ITGBL1O95965 494 aaPredicted RBP15.81■□□□□ 0.12
CHD7-207ENST00000527921 EIF2S2P20042 333 aaKnown RBP15.81■□□□□ 0.12
CHD7-207ENST00000527921 SLC10A5Q5PT55 438 aa15.81■□□□□ 0.12
CHD7-207ENST00000527921 CC2D2BQ6DHV5 1058 aa15.81■□□□□ 0.12
CHD7-207ENST00000527921 MYBBP1AQ9BQG0 1328 aaKnown RBP15.81■□□□□ 0.12
CHD7-207ENST00000527921 TRIM35Q9UPQ4 493 aa15.81■□□□□ 0.12
CHD7-207ENST00000527921 ANKRD36CQ5JPF3 1778 aa15.8■□□□□ 0.12
CHD7-207ENST00000527921 LTBP1Q14766 1721 aa15.8■□□□□ 0.12
CHD7-207ENST00000527921 CHL1O00533 1208 aa15.8■□□□□ 0.12
CHD7-207ENST00000527921 DDX10Q13206 875 aaKnown RBP15.8■□□□□ 0.12
CHD7-207ENST00000527921 KRT24Q2M2I5 525 aa15.8■□□□□ 0.12
CHD7-207ENST00000527921 PARP10Q53GL7 1025 aa15.8■□□□□ 0.12
CHD7-207ENST00000527921 PPP1R42Q7Z4L9 355 aa15.8■□□□□ 0.12
CHD7-207ENST00000527921 GPC2Q8N158 579 aa15.8■□□□□ 0.12
CHD7-207ENST00000527921 RPGRQ92834 1020 aaKnown RBP15.8■□□□□ 0.12
CHD7-207ENST00000527921 LAMB2P55268 1798 aa15.8■□□□□ 0.12
CHD7-207ENST00000527921 RNF123Q5XPI4 1314 aa15.79■□□□□ 0.12
CHD7-207ENST00000527921 LMOD3Q0VAK6 560 aa15.79■□□□□ 0.12
CHD7-207ENST00000527921 CCDC146Q8IYE0 955 aa15.79■□□□□ 0.12
CHD7-207ENST00000527921 RBM17Q96I25 401 aaKnown RBP15.79■□□□□ 0.12
CHD7-207ENST00000527921 HACL1Q9UJ83 578 aa15.79■□□□□ 0.12
CHD7-207ENST00000527921 PPEF1O14829 653 aaPredicted RBP15.78■□□□□ 0.12
CHD7-207ENST00000527921 HSPA1AP0DMV8 641 aaKnown RBP15.78■□□□□ 0.12
CHD7-207ENST00000527921 HSPA1BP0DMV9 641 aaKnown RBP15.78■□□□□ 0.12
CHD7-207ENST00000527921 EPHX2P34913 555 aa15.78■□□□□ 0.12
CHD7-207ENST00000527921 GRIPAP1Q4V328 841 aa15.78■□□□□ 0.12
CHD7-207ENST00000527921 COPS6Q7L5N1 327 aa15.78■□□□□ 0.12
CHD7-207ENST00000527921 UTP14AQ9BVJ6 771 aaKnown RBP15.78■□□□□ 0.12
CHD7-207ENST00000527921 NLRP10Q86W26 655 aa15.77■□□□□ 0.12
CHD7-207ENST00000527921 XAGE3Q8WTP9 111 aa15.77■□□□□ 0.12
CHD7-207ENST00000527921 NECTIN2Q92692 538 aa15.77■□□□□ 0.12
CHD7-207ENST00000527921 RUNDC1Q96C34 613 aa15.77■□□□□ 0.12
CHD7-207ENST00000527921 NLRP3Q96P20 1036 aa15.77■□□□□ 0.12
CHD7-207ENST00000527921 MKRN1Q9UHC7 482 aaKnown RBP15.77■□□□□ 0.12
CHD7-207ENST00000527921 CNTNAP1P78357 1384 aa15.76■□□□□ 0.11
CHD7-207ENST00000527921 ABCC4O15439 1325 aa15.76■□□□□ 0.11
CHD7-207ENST00000527921 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
CHD7-207ENST00000527921 EAPPQ56P03 285 aaPredicted RBP15.76■□□□□ 0.11
CHD7-207ENST00000527921 JDP2Q8WYK2 163 aa15.76■□□□□ 0.11
CHD7-207ENST00000527921 DDX21Q9NR30 783 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHD7-207ENST00000527921 ADAMTS8Q9UP79 889 aa15.76■□□□□ 0.11
CHD7-207ENST00000527921 ATP6V0A2Q9Y487 856 aa15.76■□□□□ 0.11
CHD7-207ENST00000527921 SCNN1DP51172 638 aa15.75■□□□□ 0.11
CHD7-207ENST00000527921 AIMP1Q12904 312 aaKnown RBP15.75■□□□□ 0.11
CHD7-207ENST00000527921 TCIRG1Q13488 830 aa15.75■□□□□ 0.11
CHD7-207ENST00000527921 PNMA8AQ86V59 439 aaPredicted RBP15.75■□□□□ 0.11
CHD7-207ENST00000527921 RTFDC1Q9BY42 306 aaPredicted RBP15.75■□□□□ 0.11
CHD7-207ENST00000527921 TMEM88BA6NKF7 163 aa15.74■□□□□ 0.11
CHD7-207ENST00000527921 TCERG1O14776 1098 aaKnown RBP15.74■□□□□ 0.11
CHD7-207ENST00000527921 MAP1SQ66K74 1059 aaPredicted RBP15.74■□□□□ 0.11
CHD7-207ENST00000527921 LARGE2Q8N3Y3 721 aa15.74■□□□□ 0.11
CHD7-207ENST00000527921 CHPF2Q9P2E5 772 aa15.74■□□□□ 0.11
CHD7-207ENST00000527921 HCLS1P14317 486 aaPredicted RBP15.73■□□□□ 0.11
CHD7-207ENST00000527921 EPS15P42566 896 aa15.73■□□□□ 0.11
CHD7-207ENST00000527921 EIF6P56537 245 aaKnown RBP15.73■□□□□ 0.11
CHD7-207ENST00000527921 HSP90AB3PQ58FF7 597 aa15.73■□□□□ 0.11
CHD7-207ENST00000527921 CNTROBQ8N137 903 aa15.73■□□□□ 0.11
CHD7-207ENST00000527921 VPS33BQ9H267 617 aa15.73■□□□□ 0.11
CHD7-207ENST00000527921 DDX60Q8IY21 1712 aaKnown RBP15.73■□□□□ 0.11
CHD7-207ENST00000527921 TAF1P21675 1872 aa15.73■□□□□ 0.11
CHD7-207ENST00000527921 HOXB7P09629 217 aa15.72■□□□□ 0.11
CHD7-207ENST00000527921 AOC3Q16853 763 aa15.72■□□□□ 0.11
CHD7-207ENST00000527921 CLEC11AQ9Y240 323 aa15.72■□□□□ 0.11
CHD7-207ENST00000527921 GJA3Q9Y6H8 435 aa15.72■□□□□ 0.11
CHD7-207ENST00000527921 LRRC37AA6NMS7 1700 aa15.71■□□□□ 0.11
CHD7-207ENST00000527921 DUOX1Q9NRD9 1551 aa15.71■□□□□ 0.11
CHD7-207ENST00000527921 COL4A1P02462 1669 aa15.71■□□□□ 0.11
CHD7-207ENST00000527921 BBOX1O75936 387 aa15.71■□□□□ 0.11
CHD7-207ENST00000527921 ZNF853P0CG23 659 aa15.71■□□□□ 0.11
CHD7-207ENST00000527921 VEGFBP49765 207 aa15.71■□□□□ 0.11
CHD7-207ENST00000527921 WDR43Q15061 677 aaKnown RBP eCLIP15.71■□□□□ 0.11
CHD7-207ENST00000527921 SP8Q8IXZ3 490 aa15.71■□□□□ 0.11
CHD7-207ENST00000527921 PLBD2Q8NHP8 589 aa15.71■□□□□ 0.11
CHD7-207ENST00000527921 CFAP44Q96MT7 982 aa15.71■□□□□ 0.11
CHD7-207ENST00000527921 ISCA1Q9BUE6 129 aa15.71■□□□□ 0.11
CHD7-207ENST00000527921 PRKRIP1Q9H875 184 aaPredicted RBP15.71■□□□□ 0.11
CHD7-207ENST00000527921 TRMT112Q9UI30 125 aaKnown RBP15.71■□□□□ 0.11
CHD7-207ENST00000527921 LAS1LQ9Y4W2 734 aaKnown RBP15.71■□□□□ 0.11
CHD7-207ENST00000527921 SH3TC1Q8TE82 1336 aa15.7■□□□□ 0.1
CHD7-207ENST00000527921 PPIP5K2O43314 1243 aa15.7■□□□□ 0.1
CHD7-207ENST00000527921 HDGFL1Q5TGJ6 251 aa15.7■□□□□ 0.1
CHD7-207ENST00000527921 NIM1KQ8IY84 436 aa15.7■□□□□ 0.1
CHD7-207ENST00000527921 TNS4Q8IZW8 715 aa15.7■□□□□ 0.1
CHD7-207ENST00000527921 RASSF10A6NK89 507 aa15.69■□□□□ 0.1
CHD7-207ENST00000527921 FMR1Q06787 632 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHD7-207ENST00000527921 CXCL9Q07325 125 aa15.69■□□□□ 0.1
CHD7-207ENST00000527921 GRAPQ13588 217 aa15.69■□□□□ 0.1
CHD7-207ENST00000527921 ANKRD13DQ6ZTN6 518 aa15.69■□□□□ 0.1
CHD7-207ENST00000527921 GRAPLQ8TC17 118 aaPredicted RBP15.69■□□□□ 0.1
CHD7-207ENST00000527921 ZNF428Q96B54 188 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms