RNA–Protein interactions for RNA: ENST00000527906.5

PSMC3-204, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 3

Gene PSMC3, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-204	ENST00000527906	MAP2K1	Q02750	393 aa	Predicted RBP	13.88	□□□□□ -0.19
PSMC3-204	ENST00000527906	NBPF10	Q6P3W6	841 aa	Known RBP	13.88	□□□□□ -0.19
PSMC3-204	ENST00000527906	LDHD	Q86WU2	507 aa		13.88	□□□□□ -0.19
PSMC3-204	ENST00000527906	NBPF15	Q8N660	670 aa		13.88	□□□□□ -0.19
PSMC3-204	ENST00000527906	RGL2	O15211	777 aa		13.87	□□□□□ -0.19
PSMC3-204	ENST00000527906	BCAR3	O75815	825 aa		13.87	□□□□□ -0.19
PSMC3-204	ENST00000527906	USPL1	Q5W0Q7	1092 aa		13.87	□□□□□ -0.19
PSMC3-204	ENST00000527906	INTS5	Q6P9B9	1019 aa	Known RBP	13.87	□□□□□ -0.19
PSMC3-204	ENST00000527906	CCDC88A	Q3V6T2	1871 aa		13.87	□□□□□ -0.19
PSMC3-204	ENST00000527906	RASSF10	A6NK89	507 aa		13.86	□□□□□ -0.19
PSMC3-204	ENST00000527906	ITGBL1	O95965	494 aa	Predicted RBP	13.86	□□□□□ -0.19
PSMC3-204	ENST00000527906	A1BG	P04217	495 aa		13.86	□□□□□ -0.19
PSMC3-204	ENST00000527906	MS4A1	P11836	297 aa		13.86	□□□□□ -0.19
PSMC3-204	ENST00000527906	RRP1	P56182	461 aa	Known RBP	13.86	□□□□□ -0.19
PSMC3-204	ENST00000527906	FLII	Q13045	1269 aa		13.86	□□□□□ -0.19
PSMC3-204	ENST00000527906	C2CD5	Q86YS7	1000 aa		13.86	□□□□□ -0.19
PSMC3-204	ENST00000527906	NECTIN2	Q92692	538 aa		13.86	□□□□□ -0.19
PSMC3-204	ENST00000527906	BCL2L13	Q9BXK5	485 aa		13.86	□□□□□ -0.19
PSMC3-204	ENST00000527906	PDE4DIP	Q5VU43	2346 aa		13.86	□□□□□ -0.19
PSMC3-204	ENST00000527906	IQCA1L	A6NCM1	817 aa		13.85	□□□□□ -0.19
PSMC3-204	ENST00000527906	ZPR1	O75312	459 aa		13.85	□□□□□ -0.19
PSMC3-204	ENST00000527906	DDX58	O95786	925 aa	Known RBP	13.85	□□□□□ -0.19
PSMC3-204	ENST00000527906	EIF5	P55010	431 aa	Known RBP	13.85	□□□□□ -0.19
PSMC3-204	ENST00000527906	NFIX	Q14938	502 aa		13.85	□□□□□ -0.19
PSMC3-204	ENST00000527906	PROSER3	Q2NL68	480 aa		13.85	□□□□□ -0.19
PSMC3-204	ENST00000527906	DEFB115	Q30KQ5	88 aa		13.85	□□□□□ -0.19
PSMC3-204	ENST00000527906	ZKSCAN2	Q63HK3	967 aa		13.85	□□□□□ -0.19
PSMC3-204	ENST00000527906	API5	Q9BZZ5	524 aa	Known RBP	13.85	□□□□□ -0.19
PSMC3-204	ENST00000527906	ZBTB1	Q9Y2K1	713 aa		13.85	□□□□□ -0.19
PSMC3-204	ENST00000527906	WDR33	Q9C0J8	1336 aa	Known RBP	13.85	□□□□□ -0.19
PSMC3-204	ENST00000527906	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.84	□□□□□ -0.19
PSMC3-204	ENST00000527906	DLEC1	Q9Y238	1755 aa		13.84	□□□□□ -0.19
PSMC3-204	ENST00000527906		A0A087WZG4	1122 aa		13.84	□□□□□ -0.19
PSMC3-204	ENST00000527906		H0YIN7	160 aa		13.84	□□□□□ -0.19
PSMC3-204	ENST00000527906	TCERG1	O14776	1098 aa	Known RBP	13.84	□□□□□ -0.19
PSMC3-204	ENST00000527906	PDE3A	Q14432	1141 aa		13.84	□□□□□ -0.19
PSMC3-204	ENST00000527906	ATF7IP	Q6VMQ6	1270 aa		13.84	□□□□□ -0.19
PSMC3-204	ENST00000527906	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.84	□□□□□ -0.19
PSMC3-204	ENST00000527906	COL15A1	P39059	1388 aa		13.83	□□□□□ -0.19
PSMC3-204	ENST00000527906	C21orf2	O43822	256 aa		13.83	□□□□□ -0.2
PSMC3-204	ENST00000527906	SERPINB2	P05120	415 aa		13.83	□□□□□ -0.2
PSMC3-204	ENST00000527906	MYL6B	P14649	208 aa		13.83	□□□□□ -0.2
PSMC3-204	ENST00000527906	NPM2	Q86SE8	214 aa	Known RBP	13.83	□□□□□ -0.2
PSMC3-204	ENST00000527906	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.83	□□□□□ -0.2
PSMC3-204	ENST00000527906	NOB1	Q9ULX3	412 aa	Known RBP	13.83	□□□□□ -0.2
PSMC3-204	ENST00000527906	BCOR	Q6W2J9	1755 aa		13.83	□□□□□ -0.2
PSMC3-204	ENST00000527906	CARMIL3	Q8ND23	1372 aa		13.83	□□□□□ -0.2
PSMC3-204	ENST00000527906	SCN7A	Q01118	1682 aa		13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	ARFGEF2	Q9Y6D5	1785 aa		13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	TRIM27	P14373	513 aa		13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	CANX	P27824	592 aa	Known RBP	13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	FKBP5	Q13451	457 aa	Predicted RBP	13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	G2E3	Q7L622	706 aa		13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	PLBD2	Q8NHP8	589 aa		13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	XAGE3	Q8WTP9	111 aa		13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	TAOK3	Q9H2K8	898 aa		13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	PHAX	Q9H814	394 aa	Known RBP	13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	ABCC4	O15439	1325 aa		13.82	□□□□□ -0.2
PSMC3-204	ENST00000527906	NRXN2	Q9P2S2	1712 aa		13.81	□□□□□ -0.2
PSMC3-204	ENST00000527906	AFDN	P55196	1824 aa	Known RBP	13.81	□□□□□ -0.2
PSMC3-204	ENST00000527906	ERVV-1	B6SEH8	477 aa		13.81	□□□□□ -0.2
PSMC3-204	ENST00000527906	ANXA1	P04083	346 aa		13.81	□□□□□ -0.2
PSMC3-204	ENST00000527906	EAPP	Q56P03	285 aa	Predicted RBP	13.81	□□□□□ -0.2
PSMC3-204	ENST00000527906	KSR2	Q6VAB6	950 aa		13.81	□□□□□ -0.2
PSMC3-204	ENST00000527906	KIF6	Q6ZMV9	814 aa		13.81	□□□□□ -0.2
PSMC3-204	ENST00000527906	COPS6	Q7L5N1	327 aa		13.81	□□□□□ -0.2
PSMC3-204	ENST00000527906	FRAT1	Q92837	279 aa	Predicted RBP	13.81	□□□□□ -0.2
PSMC3-204	ENST00000527906	LTBP3	Q9NS15	1303 aa		13.81	□□□□□ -0.2
PSMC3-204	ENST00000527906	DICER1	Q9UPY3	1922 aa	Known RBP	13.8	□□□□□ -0.2
PSMC3-204	ENST00000527906	PIP4K2A	P48426	406 aa	Predicted RBP	13.8	□□□□□ -0.2
PSMC3-204	ENST00000527906	ANKRD13D	Q6ZTN6	518 aa		13.8	□□□□□ -0.2
PSMC3-204	ENST00000527906	DZIP1L	Q8IYY4	767 aa	Known RBP	13.8	□□□□□ -0.2
PSMC3-204	ENST00000527906	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.8	□□□□□ -0.2	4e-9	■□□□□ 9.9
PSMC3-204	ENST00000527906	BEGAIN	Q9BUH8	593 aa		13.8	□□□□□ -0.2
PSMC3-204	ENST00000527906	NARF	Q9UHQ1	456 aa		13.8	□□□□□ -0.2
PSMC3-204	ENST00000527906	ABT1	Q9ULW3	272 aa	Known RBP	13.8	□□□□□ -0.2
PSMC3-204	ENST00000527906	MAP3K15	Q6ZN16	1313 aa		13.8	□□□□□ -0.2
PSMC3-204	ENST00000527906	ANKRD36C	Q5JPF3	1778 aa		13.79	□□□□□ -0.2
PSMC3-204	ENST00000527906	DZIP3	Q86Y13	1208 aa	Known RBP	13.79	□□□□□ -0.2
PSMC3-204	ENST00000527906	FTSJ3	Q8IY81	847 aa	Known RBP	13.79	□□□□□ -0.2
PSMC3-204	ENST00000527906	DNAAF4	Q8WXU2	420 aa		13.79	□□□□□ -0.2
PSMC3-204	ENST00000527906	MCOLN1	Q9GZU1	580 aa		13.79	□□□□□ -0.2
PSMC3-204	ENST00000527906	BCL2L12	Q9HB09	334 aa		13.79	□□□□□ -0.2
PSMC3-204	ENST00000527906	CLEC11A	Q9Y240	323 aa		13.79	□□□□□ -0.2
PSMC3-204	ENST00000527906	PI4KAP2	A4QPH2	592 aa		13.78	□□□□□ -0.2
PSMC3-204	ENST00000527906	CCT4	P50991	539 aa	Known RBP	13.78	□□□□□ -0.2
PSMC3-204	ENST00000527906	AIMP1	Q12904	312 aa	Known RBP	13.78	□□□□□ -0.2
PSMC3-204	ENST00000527906	INTS3	Q68E01	1043 aa	Known RBP	13.78	□□□□□ -0.2
PSMC3-204	ENST00000527906	CLEC4G	Q6UXB4	293 aa		13.78	□□□□□ -0.2
PSMC3-204	ENST00000527906	TTLL7	Q6ZT98	887 aa		13.78	□□□□□ -0.2
PSMC3-204	ENST00000527906	CNTROB	Q8N137	903 aa		13.78	□□□□□ -0.2
PSMC3-204	ENST00000527906	PI4KAP1	Q8N8J0	262 aa		13.78	□□□□□ -0.2
PSMC3-204	ENST00000527906	TSKS	Q9UJT2	592 aa		13.78	□□□□□ -0.2
PSMC3-204	ENST00000527906	FER1L6	Q2WGJ9	1857 aa		13.78	□□□□□ -0.2
PSMC3-204	ENST00000527906	CAMTA2	O94983	1202 aa		13.77	□□□□□ -0.21
PSMC3-204	ENST00000527906	SCN4A	P35499	1836 aa		13.77	□□□□□ -0.21
PSMC3-204	ENST00000527906	NEXN	Q0ZGT2	675 aa		13.77	□□□□□ -0.21
PSMC3-204	ENST00000527906	HSP90AB3P	Q58FF7	597 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms