RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CFAP58Q5T655 872 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 C10orf67Q8IYJ2 551 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 ANKS4BQ8N8V4 417 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 MRVI1Q9Y6F6 885 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 PABPN1LA6NDY0 278 aaKnown RBP8.37□□□□□ -1.07
CTNND1-216ENST00000527467 YY1P25490 414 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 ST5P78524 1137 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 ZFP91Q96JP5 570 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-216ENST00000527467 NUP62CLQ9H1M0 184 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 ELL2O00472 640 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-216ENST00000527467 NEK4P51957 841 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 LMNTD2Q8IXW0 634 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 DNAI2Q9GZS0 605 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 FAM83GA6ND36 823 aa8.36□□□□□ -1.07
CTNND1-216ENST00000527467 CTNNBL1Q8WYA6 563 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-216ENST00000527467 RASSF4Q9H2L5 321 aa8.36□□□□□ -1.07
CTNND1-216ENST00000527467 HSF2BPO75031 334 aa8.36□□□□□ -1.07
CTNND1-216ENST00000527467 FLIIQ13045 1269 aa8.36□□□□□ -1.07
CTNND1-216ENST00000527467 CCDC155Q8N6L0 562 aa8.36□□□□□ -1.07
CTNND1-216ENST00000527467 OTUD6BQ8N6M0 293 aa8.36□□□□□ -1.07
CTNND1-216ENST00000527467 SCLT1Q96NL6 688 aa8.36□□□□□ -1.07
CTNND1-216ENST00000527467 DDX58O95786 925 aaKnown RBP8.36□□□□□ -1.07
CTNND1-216ENST00000527467 PDE1CQ14123 709 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-216ENST00000527467 MAP7D1Q3KQU3 841 aa8.36□□□□□ -1.07
CTNND1-216ENST00000527467 TTC14Q96N46 770 aa8.36□□□□□ -1.07
CTNND1-216ENST00000527467 IKBKGQ9Y6K9 419 aa8.36□□□□□ -1.07
CTNND1-216ENST00000527467 SAMD9Q5K651 1589 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 EBAG9O00559 213 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 NEMFO60524 1076 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 IL2RBP14784 551 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 PPM1FP49593 454 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-216ENST00000527467 GJD4Q96KN9 370 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-216ENST00000527467 SPDYE4A6NLX3 237 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 MGEA5O60502 916 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 PSMC4P43686 418 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 CNTROBQ8N137 903 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 ATRIPQ8WXE1 791 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 LNPKQ9C0E8 428 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 NOL7Q9UMY1 257 aaKnown RBP8.35□□□□□ -1.07
CTNND1-216ENST00000527467 BRD4O60885 1362 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-216ENST00000527467 A0A1B0GUL7 405 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 CCDC57Q2TAC2 916 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 VCX3BQ9H321 246 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 A0A1W2PRG0 241 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 TRIM22Q8IYM9 498 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 USH1CQ9Y6N9 552 aa8.35□□□□□ -1.07
CTNND1-216ENST00000527467 TCOF1Q13428 1488 aaKnown RBP8.34□□□□□ -1.07
CTNND1-216ENST00000527467 KDM4AO75164 1064 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 LACTBP83111 547 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-216ENST00000527467 CKAP4Q07065 602 aaKnown RBP8.34□□□□□ -1.07
CTNND1-216ENST00000527467 TSPYL2Q9H2G4 693 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-216ENST00000527467 SLC3A2P08195 630 aaKnown RBP8.34□□□□□ -1.07
CTNND1-216ENST00000527467 CTNNA2P26232 953 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 ANKRD1Q15327 319 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 SH2D4BQ5SQS7 431 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 FKBP15Q5T1M5 1219 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 HOMEZQ8IX15 550 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 CACNA2D3Q8IZS8 1091 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 CCDC114Q96M63 670 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 IQCGQ9H095 443 aaKnown RBP8.34□□□□□ -1.07
CTNND1-216ENST00000527467 USP47Q96K76 1375 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 TIAM1Q13009 1591 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 HIP1O00291 1037 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 PPFIA2O75334 1257 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 CLNS1AP54105 237 aaKnown RBP8.34□□□□□ -1.07
CTNND1-216ENST00000527467 SH3BGRP55822 239 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-216ENST00000527467 ZBTB16Q05516 673 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 AMOTQ4VCS5 1084 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 CFAP70Q5T0N1 1121 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 ALS2CR12Q96Q35 445 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 MTMR7Q9Y216 660 aa8.34□□□□□ -1.07
CTNND1-216ENST00000527467 MACROD2A1Z1Q3 448 aa8.34□□□□□ -1.08
CTNND1-216ENST00000527467 JDP2Q8WYK2 163 aa8.34□□□□□ -1.08
CTNND1-216ENST00000527467 SSX2IPQ9Y2D8 614 aa8.34□□□□□ -1.08
CTNND1-216ENST00000527467 MAP3K1Q13233 1512 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 MAP3K11Q16584 847 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 PNISRQ8TF01 805 aaKnown RBP8.33□□□□□ -1.08
CTNND1-216ENST00000527467 SPATA32Q96LK8 384 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 PRIMPOLQ96LW4 560 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 RRP7AQ9Y3A4 280 aaKnown RBP8.33□□□□□ -1.08
CTNND1-216ENST00000527467 MAP7Q14244 749 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 PRR16Q569H4 304 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 SIRT1Q96EB6 747 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 FSD1Q9BTV5 496 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 SRRTQ9BXP5 876 aaKnown RBP8.33□□□□□ -1.08
CTNND1-216ENST00000527467 ZC4H2Q9NQZ6 224 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 CIZ1Q9ULV3 898 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-216ENST00000527467 MCM5P33992 734 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 CEP135Q66GS9 1140 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 NGEFQ8N5V2 710 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.33□□□□□ -1.086e-14■□□□□ 9.9
CTNND1-216ENST00000527467 MADDQ8WXG6 1647 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 STMN4Q9H169 189 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-216ENST00000527467 SETD1BQ9UPS6 1966 aaKnown RBP8.33□□□□□ -1.08
CTNND1-216ENST00000527467 OPA1O60313 960 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 SLU7O95391 586 aaKnown RBP8.33□□□□□ -1.08
CTNND1-216ENST00000527467 TOP1P11387 765 aaKnown RBP8.33□□□□□ -1.08
CTNND1-216ENST00000527467 PCK1P35558 622 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 CACNA2D4Q7Z3S7 1137 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms