RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 PLSCR2Q9NRY7 297 aa10.34□□□□□ -0.75
CLNS1A-205ENST00000526009 KDRP35968 1356 aa10.34□□□□□ -0.75
CLNS1A-205ENST00000526009 GPR37O15354 613 aa10.33□□□□□ -0.76
CLNS1A-205ENST00000526009 HSPA1AP0DMV8 641 aaKnown RBP10.33□□□□□ -0.76
CLNS1A-205ENST00000526009 HSPA1BP0DMV9 641 aaKnown RBP10.33□□□□□ -0.76
CLNS1A-205ENST00000526009 FECHP22830 423 aa10.33□□□□□ -0.76
CLNS1A-205ENST00000526009 PRSS12P56730 875 aa10.33□□□□□ -0.76
CLNS1A-205ENST00000526009 CDCA7LQ96GN5 454 aa10.33□□□□□ -0.76
CLNS1A-205ENST00000526009 C4AP0C0L4 1744 aa10.33□□□□□ -0.76
CLNS1A-205ENST00000526009 HSP90AB1P08238 724 aaKnown RBP10.32□□□□□ -0.76
CLNS1A-205ENST00000526009 VEGFAP15692 232 aaPredicted RBP10.32□□□□□ -0.76
CLNS1A-205ENST00000526009 CHRNA5P30532 468 aa10.32□□□□□ -0.76
CLNS1A-205ENST00000526009 LSM11P83369 360 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLNS1A-205ENST00000526009 CDCA8Q53HL2 280 aa10.32□□□□□ -0.76
CLNS1A-205ENST00000526009 PADI6Q6TGC4 694 aa10.32□□□□□ -0.76
CLNS1A-205ENST00000526009 ZBED2Q9BTP6 218 aa10.32□□□□□ -0.76
CLNS1A-205ENST00000526009 CARD14Q9BXL6 1004 aa10.32□□□□□ -0.76
CLNS1A-205ENST00000526009 ZMYND10O75800 440 aa10.31□□□□□ -0.76
CLNS1A-205ENST00000526009 CABP4P57796 275 aa10.31□□□□□ -0.76
CLNS1A-205ENST00000526009 BRCA1P38398 1863 aaKnown RBP10.31□□□□□ -0.76
CLNS1A-205ENST00000526009 ZC3H4Q9UPT8 1303 aaKnown RBP10.31□□□□□ -0.76
CLNS1A-205ENST00000526009 ARFGEF1Q9Y6D6 1849 aa10.3□□□□□ -0.76
CLNS1A-205ENST00000526009 GLTPD2A6NH11 291 aa10.3□□□□□ -0.76
CLNS1A-205ENST00000526009 PTCD1O75127 700 aaKnown RBP10.3□□□□□ -0.76
CLNS1A-205ENST00000526009 DDR1Q08345 913 aa10.3□□□□□ -0.76
CLNS1A-205ENST00000526009 KRTAP3-3Q9BYR6 98 aa10.3□□□□□ -0.76
CLNS1A-205ENST00000526009 KRTAP3-2Q9BYR7 98 aa10.3□□□□□ -0.76
CLNS1A-205ENST00000526009 POLKQ9UBT6 870 aa10.3□□□□□ -0.76
CLNS1A-205ENST00000526009 SRP68Q9UHB9 627 aaKnown RBP10.3□□□□□ -0.76
CLNS1A-205ENST00000526009 USP42Q9H9J4 1324 aaKnown RBP10.3□□□□□ -0.76
CLNS1A-205ENST00000526009 TRIM6-TRIM34B2RNG4 842 aa10.29□□□□□ -0.76
CLNS1A-205ENST00000526009 LMNB1P20700 586 aa10.29□□□□□ -0.76
CLNS1A-205ENST00000526009 CRKLP46109 303 aaKnown RBP10.29□□□□□ -0.76
CLNS1A-205ENST00000526009 RASSF7Q02833 373 aa10.29□□□□□ -0.76
CLNS1A-205ENST00000526009 PLEKHO1Q53GL0 409 aaPredicted RBP10.29□□□□□ -0.76
CLNS1A-205ENST00000526009 PACS2Q86VP3 889 aa10.29□□□□□ -0.76
CLNS1A-205ENST00000526009 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
CLNS1A-205ENST00000526009 KIF20BQ96Q89 1820 aa10.28□□□□□ -0.76
CLNS1A-205ENST00000526009 POLRMTO00411 1230 aaKnown RBP10.28□□□□□ -0.76
CLNS1A-205ENST00000526009 TM4SF1P30408 202 aa10.28□□□□□ -0.76
CLNS1A-205ENST00000526009 EIF4A2Q14240 407 aaKnown RBP10.28□□□□□ -0.76
CLNS1A-205ENST00000526009 KIAA1468Q9P260 1216 aa10.28□□□□□ -0.76
CLNS1A-205ENST00000526009 VPS9D1Q9Y2B5 631 aa10.28□□□□□ -0.76
CLNS1A-205ENST00000526009 ZNF831Q5JPB2 1677 aa10.28□□□□□ -0.76
CLNS1A-205ENST00000526009 TNRC6CQ9HCJ0 1690 aaKnown RBP10.28□□□□□ -0.76
CLNS1A-205ENST00000526009 ZPR1O75312 459 aa10.27□□□□□ -0.77
CLNS1A-205ENST00000526009 MTHFSP49914 203 aa10.27□□□□□ -0.77
CLNS1A-205ENST00000526009 FAM161AQ3B820 660 aa10.27□□□□□ -0.77
CLNS1A-205ENST00000526009 AMOTQ4VCS5 1084 aa10.27□□□□□ -0.77
CLNS1A-205ENST00000526009 NFATC2IPQ8NCF5 419 aa10.27□□□□□ -0.77
CLNS1A-205ENST00000526009 RBM27Q9P2N5 1060 aaKnown RBP10.27□□□□□ -0.77
CLNS1A-205ENST00000526009 FAM198AQ9UFP1 575 aa10.27□□□□□ -0.77
CLNS1A-205ENST00000526009 MYH14Q7Z406 1995 aaKnown RBP10.26□□□□□ -0.77
CLNS1A-205ENST00000526009 KDM6AO15550 1401 aaPredicted RBP10.26□□□□□ -0.77
CLNS1A-205ENST00000526009 SBF1O95248 1867 aa10.26□□□□□ -0.77
CLNS1A-205ENST00000526009 ZNF530Q6P9A1 599 aaPredicted RBP10.26□□□□□ -0.77
CLNS1A-205ENST00000526009 INTS5Q6P9B9 1019 aaKnown RBP10.26□□□□□ -0.77
CLNS1A-205ENST00000526009 ADGRD1Q6QNK2 874 aa10.26□□□□□ -0.77
CLNS1A-205ENST00000526009 TTLL6Q8N841 843 aa10.26□□□□□ -0.77
CLNS1A-205ENST00000526009 SLC4A5Q9BY07 1137 aa10.26□□□□□ -0.77
CLNS1A-205ENST00000526009 COL5A3P25940 1745 aaPredicted RBP10.26□□□□□ -0.77
CLNS1A-205ENST00000526009 TK2O00142 265 aa10.25□□□□□ -0.77
CLNS1A-205ENST00000526009 TNNT2P45379 298 aaPredicted RBP10.25□□□□□ -0.77
CLNS1A-205ENST00000526009 C1orf141Q5JVX7 400 aa10.25□□□□□ -0.77
CLNS1A-205ENST00000526009 USPL1Q5W0Q7 1092 aa10.25□□□□□ -0.77
CLNS1A-205ENST00000526009 POTECB2RU33 542 aa10.24□□□□□ -0.77
CLNS1A-205ENST00000526009 MAP2K5Q13163 448 aa10.24□□□□□ -0.77
CLNS1A-205ENST00000526009 NFIXQ14938 502 aa10.24□□□□□ -0.77
CLNS1A-205ENST00000526009 SPNS2Q8IVW8 549 aa10.24□□□□□ -0.77
CLNS1A-205ENST00000526009 SLC24A3Q9HC58 644 aa10.24□□□□□ -0.77
CLNS1A-205ENST00000526009 MKRN1Q9UHC7 482 aaKnown RBP10.24□□□□□ -0.77
CLNS1A-205ENST00000526009 RABGEF1Q9UJ41 708 aa10.24□□□□□ -0.77
CLNS1A-205ENST00000526009 PNMA3Q9UL41 463 aa10.24□□□□□ -0.77
CLNS1A-205ENST00000526009 ANKRD26Q9UPS8 1709 aa10.24□□□□□ -0.77
CLNS1A-205ENST00000526009 NBPF26B4DH59 902 aa10.23□□□□□ -0.77
CLNS1A-205ENST00000526009 H0YIN7 160 aa10.23□□□□□ -0.77
CLNS1A-205ENST00000526009 NFKBIEO00221 500 aa10.23□□□□□ -0.77
CLNS1A-205ENST00000526009 IRF6O14896 467 aa10.23□□□□□ -0.77
CLNS1A-205ENST00000526009 SERPINB2P05120 415 aa10.23□□□□□ -0.77
CLNS1A-205ENST00000526009 NUDT18Q6ZVK8 323 aa10.23□□□□□ -0.77
CLNS1A-205ENST00000526009 TTC13Q8NBP0 860 aa10.23□□□□□ -0.77
CLNS1A-205ENST00000526009 TATDN2Q93075 761 aa10.23□□□□□ -0.77
CLNS1A-205ENST00000526009 NARFQ9UHQ1 456 aa10.23□□□□□ -0.77
CLNS1A-205ENST00000526009 SMAPO00193 183 aa10.22□□□□□ -0.77
CLNS1A-205ENST00000526009 ERFEQ4G0M1 354 aa10.22□□□□□ -0.77
CLNS1A-205ENST00000526009 C2CD5Q86YS7 1000 aa10.22□□□□□ -0.77
CLNS1A-205ENST00000526009 DNAJC10Q8IXB1 793 aa10.22□□□□□ -0.77
CLNS1A-205ENST00000526009 PRDM10Q9NQV6 1147 aa10.22□□□□□ -0.77
CLNS1A-205ENST00000526009 SOS1Q07889 1333 aaPredicted RBP10.22□□□□□ -0.77
CLNS1A-205ENST00000526009 C3orf80F5H4A9 247 aa10.21□□□□□ -0.77
CLNS1A-205ENST00000526009 FOXN1O15353 648 aa10.21□□□□□ -0.77
CLNS1A-205ENST00000526009 SEPT9Q9UHD8 586 aaPredicted RBP10.21□□□□□ -0.77
CLNS1A-205ENST00000526009 ADGRG1Q9Y653 693 aa10.21□□□□□ -0.77
CLNS1A-205ENST00000526009 OATP04181 439 aa10.2□□□□□ -0.78
CLNS1A-205ENST00000526009 CYP19A1P11511 503 aaPredicted RBP10.2□□□□□ -0.78
CLNS1A-205ENST00000526009 AEBP1Q8IUX7 1158 aa10.2□□□□□ -0.78
CLNS1A-205ENST00000526009 CCDC102AQ96A19 550 aa10.2□□□□□ -0.78
CLNS1A-205ENST00000526009 NBPF3Q9H094 633 aa10.2□□□□□ -0.78
CLNS1A-205ENST00000526009 C21orf2O43822 256 aa10.19□□□□□ -0.78
CLNS1A-205ENST00000526009 CTCFP49711 727 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms