RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-216	ENST00000525997	C9orf78	Q9NZ63	289 aa	Predicted RBP	6.6	□□□□□ -1.35
PUM1-216	ENST00000525997	NIP7	Q9Y221	180 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
PUM1-216	ENST00000525997	ARFGEF2	Q9Y6D5	1785 aa		6.59	□□□□□ -1.35
PUM1-216	ENST00000525997	PNPLA7	Q6ZV29	1317 aa		6.59	□□□□□ -1.35
PUM1-216	ENST00000525997	UBTFL1	P0CB47	393 aa	Predicted RBP	6.59	□□□□□ -1.35
PUM1-216	ENST00000525997	POLD1	P28340	1107 aa		6.59	□□□□□ -1.35
PUM1-216	ENST00000525997	BEND3	Q5T5X7	828 aa		6.59	□□□□□ -1.35
PUM1-216	ENST00000525997	CLUAP1	Q96AJ1	413 aa		6.59	□□□□□ -1.35
PUM1-216	ENST00000525997	ANO8	Q9HCE9	1232 aa	Predicted RBP	6.59	□□□□□ -1.35
PUM1-216	ENST00000525997	ANKRD36C	Q5JPF3	1778 aa		6.59	□□□□□ -1.35
PUM1-216	ENST00000525997	N4BP2	Q86UW6	1770 aa	Predicted RBP	6.59	□□□□□ -1.35
PUM1-216	ENST00000525997	C4A	P0C0L4	1744 aa		6.59	□□□□□ -1.36
PUM1-216	ENST00000525997	SH3TC1	Q8TE82	1336 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	NEURL1B	A8MQ27	555 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997		F6X3S4	739 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	GRM8	O00222	908 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	GYS1	P13807	737 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	ST5	P78524	1137 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	PLCB2	Q00722	1185 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	TPTE2	Q6XPS3	522 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	NBPF5P	Q86XG9	351 aa	Predicted RBP	6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	COL23A1	Q86Y22	540 aa	Predicted RBP	6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	TMEM57	Q8N5G2	664 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	ISCA1	Q9BUE6	129 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	UTP14A	Q9BVJ6	771 aa	Known RBP	6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	MTFR1L	Q9H019	292 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	PDZRN3	Q9UPQ7	1066 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	PARP3	Q9Y6F1	533 aa		6.58	□□□□□ -1.36
PUM1-216	ENST00000525997	NUP98	P52948	1817 aa		6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	PSD	A5PKW4	1024 aa	Predicted RBP	6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	PLIN1	O60240	522 aa		6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	HMMR	O75330	724 aa		6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	PCCA	P05165	728 aa	Predicted RBP	6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	GPT	P24298	496 aa		6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	GCKR	Q14397	625 aa		6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	HLF	Q16534	295 aa		6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	NLRP10	Q86W26	655 aa		6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	ZNF34	Q8IZ26	560 aa		6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	CNBD1	Q8NA66	436 aa		6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	SRP68	Q9UHB9	627 aa	Known RBP	6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	TRMT112	Q9UI30	125 aa	Known RBP	6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	COG6	Q9Y2V7	657 aa		6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	AFDN	P55196	1824 aa	Known RBP	6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	TUBGCP6	Q96RT7	1819 aa		6.57	□□□□□ -1.36
PUM1-216	ENST00000525997	UTY	O14607	1347 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	CDHR2	Q9BYE9	1310 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	ATP5J2-PTCD1	G3V325	749 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	PDE8A	O60658	829 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	GNAI2	P04899	355 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	SERPINB2	P05120	415 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	IGKV5-2	P06315	115 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	NFIX	Q14938	502 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	R3HDM1	Q15032	1099 aa	Known RBP	6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	CWF19L2	Q2TBE0	894 aa	Known RBP	6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	TBC1D9B	Q66K14	1250 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	BICDL1	Q6ZP65	573 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	PANK1	Q8TE04	598 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	RIC1	Q4ADV7	1423 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	COL24A1	Q17RW2	1714 aa		6.56	□□□□□ -1.36
PUM1-216	ENST00000525997	CASZ1	Q86V15	1759 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997		H7C1W4	665 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	IRS4	O14654	1257 aa	Predicted RBP	6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	MMP10	P09238	476 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	RLBP1	P12271	317 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	TM4SF1	P30408	202 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	PDE6B	P35913	854 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	CCDC152	Q4G0S7	254 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	UBE3B	Q7Z3V4	1068 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	RPAP2	Q8IXW5	612 aa	Predicted RBP	6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	NLRP3	Q96P20	1036 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	CRBN	Q96SW2	442 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	PLA2G12B	Q9BX93	195 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	BCL2L12	Q9HB09	334 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	SPON1	Q9HCB6	807 aa		6.55	□□□□□ -1.36
PUM1-216	ENST00000525997	UBN2	Q6ZU65	1347 aa		6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	POLRMT	O00411	1230 aa	Known RBP	6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	ZBTB7B	O15156	539 aa	Predicted RBP	6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	NTSR2	O95665	410 aa		6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	SLC10A5	Q5PT55	438 aa		6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	SUSD4	Q5VX71	490 aa		6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	RPGR	Q92834	1020 aa	Known RBP	6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	MEIS3	Q99687	375 aa		6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	PDGFD	Q9GZP0	370 aa	Predicted RBP	6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	USP44	Q9H0E7	712 aa		6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	TMX4	Q9H1E5	349 aa	Predicted RBP	6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	ZBTB40	Q9NUA8	1239 aa		6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	ZBTB47	Q9UFB7	747 aa	Predicted RBP	6.54	□□□□□ -1.36
PUM1-216	ENST00000525997	FAM177B	A6PVY3	158 aa		6.53	□□□□□ -1.36
PUM1-216	ENST00000525997	CTSW	P56202	376 aa		6.53	□□□□□ -1.36
PUM1-216	ENST00000525997	CCDC57	Q2TAC2	916 aa		6.53	□□□□□ -1.36
PUM1-216	ENST00000525997	HSP90AB4P	Q58FF6	505 aa		6.53	□□□□□ -1.36
PUM1-216	ENST00000525997	TAF7L	Q5H9L4	462 aa		6.53	□□□□□ -1.36
PUM1-216	ENST00000525997	C20orf194	Q5TEA3	1177 aa		6.53	□□□□□ -1.36
PUM1-216	ENST00000525997	MSL1	Q68DK7	614 aa		6.53	□□□□□ -1.36
PUM1-216	ENST00000525997	PRR5L	Q6MZQ0	368 aa		6.53	□□□□□ -1.36
PUM1-216	ENST00000525997	TMC4	Q7Z404	712 aa		6.53	□□□□□ -1.36
PUM1-216	ENST00000525997	AMIGO3	Q86WK7	504 aa		6.53	□□□□□ -1.36
PUM1-216	ENST00000525997	FAM89A	Q96GI7	184 aa		6.53	□□□□□ -1.36
PUM1-216	ENST00000525997	CDC5L	Q99459	802 aa	Known RBP	6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms