RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 C1orf53Q5VUE5 145 aa8.47□□□□□ -1.05
SVIP-202ENST00000525670 LINC00114Q6XXX2 140 aa8.47□□□□□ -1.05
SVIP-202ENST00000525670 TSPAN10Q9H1Z9 355 aaPredicted RBP8.47□□□□□ -1.05
SVIP-202ENST00000525670 KLF15Q9UIH9 416 aa8.47□□□□□ -1.05
SVIP-202ENST00000525670 PRR12Q9ULL5 1215 aa8.47□□□□□ -1.05
SVIP-202ENST00000525670 PIK3R2O00459 728 aa8.46□□□□□ -1.06
SVIP-202ENST00000525670 HIRAP54198 1017 aaPredicted RBP8.46□□□□□ -1.06
SVIP-202ENST00000525670 SUZ12Q15022 739 aaKnown RBP8.46□□□□□ -1.06
SVIP-202ENST00000525670 SH3PXD2AQ5TCZ1 1133 aa8.46□□□□□ -1.06
SVIP-202ENST00000525670 ZNF468Q5VIY5 522 aaPredicted RBP8.46□□□□□ -1.06
SVIP-202ENST00000525670 POTEAQ6S8J7 498 aa8.46□□□□□ -1.06
SVIP-202ENST00000525670 LRRC69Q6ZNQ3 347 aa8.46□□□□□ -1.06
SVIP-202ENST00000525670 ALYREFQ86V81 257 aaKnown RBP8.46□□□□□ -1.06
SVIP-202ENST00000525670 ZNF594Q96JF6 807 aaPredicted RBP8.46□□□□□ -1.06
SVIP-202ENST00000525670 STRN4Q9NRL3 753 aa8.46□□□□□ -1.06
SVIP-202ENST00000525670 CHMP3Q9Y3E7 222 aa8.46□□□□□ -1.06
SVIP-202ENST00000525670 MAFBQ9Y5Q3 323 aaPredicted RBP8.46□□□□□ -1.06
SVIP-202ENST00000525670 KIAA0556O60303 1618 aa8.46□□□□□ -1.06
SVIP-202ENST00000525670 KIF21BO75037 1637 aa8.46□□□□□ -1.06
SVIP-202ENST00000525670 EEA1Q15075 1411 aa8.46□□□□□ -1.06
SVIP-202ENST00000525670 SFI1A8K8P3 1242 aa8.45□□□□□ -1.06
SVIP-202ENST00000525670 RASA1P20936 1047 aa8.45□□□□□ -1.06
SVIP-202ENST00000525670 MSTNO14793 375 aa8.44□□□□□ -1.06
SVIP-202ENST00000525670 ITGB2P05107 769 aa8.44□□□□□ -1.06
SVIP-202ENST00000525670 FCHSD1Q86WN1 690 aa8.44□□□□□ -1.06
SVIP-202ENST00000525670 TSEN2Q8NCE0 465 aaKnown RBP8.44□□□□□ -1.06
SVIP-202ENST00000525670 RHPN1Q8TCX5 695 aa8.44□□□□□ -1.06
SVIP-202ENST00000525670 CALR3Q96L12 384 aaKnown RBP8.44□□□□□ -1.06
SVIP-202ENST00000525670 HCN4Q9Y3Q4 1203 aa8.44□□□□□ -1.06
SVIP-202ENST00000525670 PCBP4P57723 403 aaKnown RBP8.43□□□□□ -1.06
SVIP-202ENST00000525670 CHSY3Q70JA7 882 aa8.43□□□□□ -1.06
SVIP-202ENST00000525670 PPP1R12CQ9BZL4 782 aa8.43□□□□□ -1.06
SVIP-202ENST00000525670 ANKIB1Q9P2G1 1089 aa8.43□□□□□ -1.06
SVIP-202ENST00000525670 DISP1Q96F81 1524 aa8.43□□□□□ -1.06
SVIP-202ENST00000525670 ADCY10Q96PN6 1610 aa8.43□□□□□ -1.06
SVIP-202ENST00000525670 GNB5O14775 395 aa8.42□□□□□ -1.06
SVIP-202ENST00000525670 PPP1R12BO60237 982 aaPredicted RBP8.42□□□□□ -1.06
SVIP-202ENST00000525670 COL8A1P27658 744 aa8.42□□□□□ -1.06
SVIP-202ENST00000525670 DGKGP49619 791 aa8.42□□□□□ -1.06
SVIP-202ENST00000525670 SEC13P55735 322 aa8.42□□□□□ -1.06
SVIP-202ENST00000525670 LARP1Q6PKG0 1096 aaKnown RBP8.42□□□□□ -1.06
SVIP-202ENST00000525670 STAG2Q8N3U4 1231 aa8.42□□□□□ -1.06
SVIP-202ENST00000525670 GAS2L2Q8NHY3 880 aa8.42□□□□□ -1.06
SVIP-202ENST00000525670 SPOCK3Q9BQ16 436 aa8.42□□□□□ -1.06
SVIP-202ENST00000525670 PHACTR1Q9C0D0 580 aa8.42□□□□□ -1.06
SVIP-202ENST00000525670 ATAD2Q6PL18 1390 aa8.42□□□□□ -1.06
SVIP-202ENST00000525670 GOLGA3Q08378 1498 aa8.42□□□□□ -1.06
SVIP-202ENST00000525670 UGGT2Q9NYU1 1516 aa8.42□□□□□ -1.06
SVIP-202ENST00000525670 KRBA1A5PL33 1030 aa8.41□□□□□ -1.06
SVIP-202ENST00000525670 ARID3CA6NKF2 412 aa8.41□□□□□ -1.06
SVIP-202ENST00000525670 C21orf2O43822 256 aa8.41□□□□□ -1.06
SVIP-202ENST00000525670 KANK4Q5T7N3 995 aaPredicted RBP8.41□□□□□ -1.06
SVIP-202ENST00000525670 CARMIL2Q6F5E8 1435 aa8.4□□□□□ -1.06
SVIP-202ENST00000525670 SFSWAPQ12872 951 aaKnown RBP8.4□□□□□ -1.06
SVIP-202ENST00000525670 SYT9Q86SS6 491 aa8.4□□□□□ -1.06
SVIP-202ENST00000525670 C2orf49Q9BVC5 232 aaPredicted RBP8.4□□□□□ -1.06
SVIP-202ENST00000525670 SUV39H2Q9H5I1 410 aa8.4□□□□□ -1.06
SVIP-202ENST00000525670 FHOD3Q2V2M9 1422 aa8.39□□□□□ -1.07
SVIP-202ENST00000525670 SIN3BO75182 1162 aa8.39□□□□□ -1.07
SVIP-202ENST00000525670 PTK7Q13308 1070 aa8.39□□□□□ -1.07
SVIP-202ENST00000525670 GRIN2CQ14957 1233 aa8.39□□□□□ -1.07
SVIP-202ENST00000525670 SCG3Q8WXD2 468 aaKnown RBP8.39□□□□□ -1.07
SVIP-202ENST00000525670 SUSD3Q96L08 255 aa8.39□□□□□ -1.07
SVIP-202ENST00000525670 NOP53Q9NZM5 478 aaKnown RBP8.39□□□□□ -1.07
SVIP-202ENST00000525670 PTPRGP23470 1445 aa8.38□□□□□ -1.07
SVIP-202ENST00000525670 ELOA3CA0A087WX78 387 aaPredicted RBP8.38□□□□□ -1.07
SVIP-202ENST00000525670 ELOA3DA6NLF2 546 aaPredicted RBP8.38□□□□□ -1.07
SVIP-202ENST00000525670 PROCP04070 461 aa8.38□□□□□ -1.07
SVIP-202ENST00000525670 ALAS2P22557 587 aa8.38□□□□□ -1.07
SVIP-202ENST00000525670 ELOA3BQ3SY89 546 aa8.38□□□□□ -1.07
SVIP-202ENST00000525670 CRTC2Q53ET0 693 aaPredicted RBP8.38□□□□□ -1.07
SVIP-202ENST00000525670 ALDH16A1Q8IZ83 802 aa8.38□□□□□ -1.07
SVIP-202ENST00000525670 ELOA3Q8NG57 546 aa8.38□□□□□ -1.07
SVIP-202ENST00000525670 HSH2DQ96JZ2 352 aa8.38□□□□□ -1.07
SVIP-202ENST00000525670 CEP63Q96MT8 703 aa8.38□□□□□ -1.07
SVIP-202ENST00000525670 HINFPQ9BQA5 517 aa8.38□□□□□ -1.07
SVIP-202ENST00000525670 VRTNQ9H8Y1 702 aa8.38□□□□□ -1.07
SVIP-202ENST00000525670 SAMD9Q5K651 1589 aa8.38□□□□□ -1.07
SVIP-202ENST00000525670 TNIKQ9UKE5 1360 aa8.37□□□□□ -1.07
SVIP-202ENST00000525670 ADARB2-AS1A8MUL3 147 aa8.37□□□□□ -1.07
SVIP-202ENST00000525670 LMOD1P29536 600 aaPredicted RBP8.37□□□□□ -1.07
SVIP-202ENST00000525670 KCNQ4P56696 695 aa8.37□□□□□ -1.07
SVIP-202ENST00000525670 DPYDQ12882 1025 aa8.37□□□□□ -1.07
SVIP-202ENST00000525670 ZNF280CQ8ND82 737 aa8.37□□□□□ -1.07
SVIP-202ENST00000525670 SLC30A3Q99726 388 aa8.37□□□□□ -1.07
SVIP-202ENST00000525670 MDFIQ99750 246 aa8.37□□□□□ -1.07
SVIP-202ENST00000525670 BRD7Q9NPI1 651 aa8.37□□□□□ -1.07
SVIP-202ENST00000525670 PLB1Q6P1J6 1458 aa8.37□□□□□ -1.07
SVIP-202ENST00000525670 LOC100996750A0A140TA64 210 aa8.36□□□□□ -1.07
SVIP-202ENST00000525670 FAM196BA6NMK8 535 aa8.36□□□□□ -1.07
SVIP-202ENST00000525670 SPEM2Q0P670 501 aa8.36□□□□□ -1.07
SVIP-202ENST00000525670 NEUROD1Q13562 356 aa8.36□□□□□ -1.07
SVIP-202ENST00000525670 HIF1AQ16665 826 aa8.36□□□□□ -1.07
SVIP-202ENST00000525670 KRTAP4-6Q9BYQ5 205 aa8.36□□□□□ -1.07
SVIP-202ENST00000525670 KCNH4Q9UQ05 1017 aa8.36□□□□□ -1.07
SVIP-202ENST00000525670 TYRO3Q06418 890 aa8.35□□□□□ -1.07
SVIP-202ENST00000525670 ANKMY2Q8IV38 441 aa8.35□□□□□ -1.07
SVIP-202ENST00000525670 ZCCHC11Q5TAX3 1644 aaKnown RBP8.35□□□□□ -1.07
SVIP-202ENST00000525670 ABCC2Q92887 1545 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 USP17L15C9J2P7 530 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms