RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 TTC21BQ7Z4L5 1316 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 LARGE1O95461 756 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 GJB2P29033 226 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 DCTN1Q14203 1278 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 SLC4A10Q6U841 1118 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 RPAP2Q8IXW5 612 aaPredicted RBP13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 ZNF428Q96B54 188 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 HDAC5Q9UQL6 1122 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 PTPRCP08575 1304 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 A0A087WWV3 80 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 PLEKHG3A1L390 1219 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 TTC6Q86TZ1 520 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 PTCH1Q13635 1447 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 CCDC171Q6TFL3 1326 aa13.28□□□□□ -0.28
CLNS1A-204ENST00000525428 ZNF142P52746 1687 aaPredicted RBP13.27□□□□□ -0.28
CLNS1A-204ENST00000525428 PIK3R4Q99570 1358 aa13.27□□□□□ -0.28
CLNS1A-204ENST00000525428 FAM83GA6ND36 823 aa13.27□□□□□ -0.28
CLNS1A-204ENST00000525428 CCDC69A6NI79 296 aa13.27□□□□□ -0.28
CLNS1A-204ENST00000525428 NYAP1Q6ZVC0 841 aa13.27□□□□□ -0.28
CLNS1A-204ENST00000525428 TXLNBQ8N3L3 684 aa13.27□□□□□ -0.28
CLNS1A-204ENST00000525428 LMTK3Q96Q04 1460 aa13.27□□□□□ -0.29
CLNS1A-204ENST00000525428 TMEM94Q12767 1356 aa13.27□□□□□ -0.29
CLNS1A-204ENST00000525428 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
CLNS1A-204ENST00000525428 H2AFXP16104 143 aaPredicted RBP13.27□□□□□ -0.29
CLNS1A-204ENST00000525428 CASQ1P31415 396 aa13.27□□□□□ -0.29
CLNS1A-204ENST00000525428 ANAPC15P60006 121 aa13.27□□□□□ -0.29
CLNS1A-204ENST00000525428 TMCO3Q6UWJ1 677 aa13.27□□□□□ -0.29
CLNS1A-204ENST00000525428 COG3Q96JB2 828 aa13.27□□□□□ -0.29
CLNS1A-204ENST00000525428 DRC1Q96MC2 740 aa13.27□□□□□ -0.29
CLNS1A-204ENST00000525428 EPC1Q9H2F5 836 aa13.27□□□□□ -0.29
CLNS1A-204ENST00000525428 PHF8Q9UPP1 1060 aa13.27□□□□□ -0.29
CLNS1A-204ENST00000525428 SLFNL1Q499Z3 407 aa13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 EP400NLQ6ZTU2 488 aa13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 RUFY3Q7L099 469 aa13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 CPSF1Q10570 1443 aaKnown RBP13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 ADGRB2O60241 1585 aa13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 GOLGA6L19H0YKK7 550 aa13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 MTMR6Q9Y217 621 aa13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 LMAN1P49257 510 aa13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 NLRP6P59044 892 aa13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 TPM4P67936 248 aa13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 CREBRFQ8IUR6 639 aa13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 CCAR2Q8N163 923 aaKnown RBP13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 KLHL34Q8N239 644 aa13.26□□□□□ -0.29
CLNS1A-204ENST00000525428 GNAI1P63096 354 aa13.25□□□□□ -0.29
CLNS1A-204ENST00000525428 PSME1Q06323 249 aa13.25□□□□□ -0.29
CLNS1A-204ENST00000525428 SART3Q15020 963 aaKnown RBP13.25□□□□□ -0.29
CLNS1A-204ENST00000525428 NECAB1Q8N987 351 aa13.25□□□□□ -0.29
CLNS1A-204ENST00000525428 GEMIN8Q9NWZ8 242 aaKnown RBP13.25□□□□□ -0.29
CLNS1A-204ENST00000525428 ANKRD65E5RJM6 399 aa13.25□□□□□ -0.29
CLNS1A-204ENST00000525428 OAS2P29728 719 aaKnown RBP13.25□□□□□ -0.29
CLNS1A-204ENST00000525428 FAM193AP78312 1265 aa13.25□□□□□ -0.29
CLNS1A-204ENST00000525428 SNW1Q13573 536 aaKnown RBP13.25□□□□□ -0.29
CLNS1A-204ENST00000525428 ICE2Q659A1 982 aa13.25□□□□□ -0.29
CLNS1A-204ENST00000525428 ABTB2Q8N961 1025 aa13.25□□□□□ -0.29
CLNS1A-204ENST00000525428 LIMCH1Q9UPQ0 1083 aa13.25□□□□□ -0.29
CLNS1A-204ENST00000525428 CASTP20810 708 aaKnown RBP13.24□□□□□ -0.29
CLNS1A-204ENST00000525428 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
CLNS1A-204ENST00000525428 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
CLNS1A-204ENST00000525428 GPS2Q13227 327 aa13.24□□□□□ -0.29
CLNS1A-204ENST00000525428 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.24□□□□□ -0.29
CLNS1A-204ENST00000525428 UBXN4Q92575 508 aa13.24□□□□□ -0.29
CLNS1A-204ENST00000525428 MSH6P52701 1360 aa13.24□□□□□ -0.29
CLNS1A-204ENST00000525428 ATP10DQ9P241 1426 aa13.24□□□□□ -0.29
CLNS1A-204ENST00000525428 RGPD8O14715 1765 aaPredicted RBP13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 NR1I2O75469 434 aa13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 HOMER1Q86YM7 354 aa13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 BICD2Q8TD16 824 aa13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 C19orf44Q9H6X5 657 aa13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 RRP15Q9Y3B9 282 aaKnown RBP13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 ATF3P18847 181 aa13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 KRT85P78386 507 aa13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 E2F4Q16254 413 aa13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 DHX37Q8IY37 1157 aaKnown RBP13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 TDRD7Q8NHU6 1098 aaKnown RBP13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 KNDC1Q76NI1 1749 aa13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 MUM1L1Q5H9M0 696 aa13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 YY1AP1Q9H869 796 aa13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 XRN1Q8IZH2 1706 aaKnown RBP13.23□□□□□ -0.29
CLNS1A-204ENST00000525428 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 F6X3S4 739 aa13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 HMMRO75330 724 aa13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 ARGLU1Q9NWB6 273 aaPredicted RBP13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 SNX14Q9Y5W7 946 aa13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 BECN2A8MW95 431 aa13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 FCHSD2O94868 740 aa13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 HSPA4P34932 840 aa13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 CCZ1BP86790 482 aa13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 CCZ1P86791 482 aaPredicted RBP13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 NFE2L2Q16236 605 aa13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 LARP1BQ659C4 914 aaKnown RBP13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 CDC37L1Q7L3B6 337 aa13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 IL1RAPL2Q9NP60 686 aa13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 SPG7Q9UQ90 795 aa13.22□□□□□ -0.29
CLNS1A-204ENST00000525428 USP6P35125 1406 aa13.21□□□□□ -0.29
CLNS1A-204ENST00000525428 CHD2O14647 1828 aaKnown RBP13.21□□□□□ -0.29
CLNS1A-204ENST00000525428 RNF20Q5VTR2 975 aa13.21□□□□□ -0.29
CLNS1A-204ENST00000525428 SRLQ86TD4 932 aa13.21□□□□□ -0.29
CLNS1A-204ENST00000525428 SPATA32Q96LK8 384 aa13.21□□□□□ -0.29
CLNS1A-204ENST00000525428 CWC15Q9P013 229 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms