RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 KCNH4Q9UQ05 1017 aa10.78□□□□□ -0.68
COPB1-203ENST00000525214 KANK3Q6NY19 840 aa10.77□□□□□ -0.69
COPB1-203ENST00000525214 BEND7Q8N7W2 519 aaPredicted RBP10.77□□□□□ -0.69
COPB1-203ENST00000525214 MYO19Q96H55 970 aa10.77□□□□□ -0.69
COPB1-203ENST00000525214 GRNP28799 593 aaKnown RBP10.76□□□□□ -0.69
COPB1-203ENST00000525214 DGKZQ13574 1117 aa10.76□□□□□ -0.69
COPB1-203ENST00000525214 PODNQ7Z5L7 613 aa10.76□□□□□ -0.69
COPB1-203ENST00000525214 RAB44Q7Z6P3 723 aaPredicted RBP10.76□□□□□ -0.69
COPB1-203ENST00000525214 SLAIN2Q9P270 581 aa10.76□□□□□ -0.69
COPB1-203ENST00000525214 LRFN2Q9ULH4 789 aa10.76□□□□□ -0.69
COPB1-203ENST00000525214 PHF20L1A8MW92 1017 aa10.75□□□□□ -0.69
COPB1-203ENST00000525214 AMPD1P23109 780 aa10.75□□□□□ -0.69
COPB1-203ENST00000525214 CHSY3Q70JA7 882 aa10.75□□□□□ -0.69
COPB1-203ENST00000525214 VTI1AQ96AJ9 217 aa10.75□□□□□ -0.69
COPB1-203ENST00000525214 SIN3BO75182 1162 aa10.74□□□□□ -0.69
COPB1-203ENST00000525214 DGKGP49619 791 aa10.74□□□□□ -0.69
COPB1-203ENST00000525214 LINC00114Q6XXX2 140 aa10.74□□□□□ -0.69
COPB1-203ENST00000525214 RRAGCQ9HB90 399 aa10.74□□□□□ -0.69
COPB1-203ENST00000525214 KCTD17Q8N5Z5 321 aa10.73□□□□□ -0.69
COPB1-203ENST00000525214 CLP1Q92989 425 aaKnown RBP10.73□□□□□ -0.69
COPB1-203ENST00000525214 CXXC1Q9P0U4 656 aaPredicted RBP10.73□□□□□ -0.69
COPB1-203ENST00000525214 MKL2Q9ULH7 1088 aa10.73□□□□□ -0.69
COPB1-203ENST00000525214 IDH3AP50213 366 aa10.72□□□□□ -0.69
COPB1-203ENST00000525214 C11orf91Q3C1V1 193 aa10.72□□□□□ -0.69
COPB1-203ENST00000525214 COX20Q5RI15 118 aa10.72□□□□□ -0.69
COPB1-203ENST00000525214 CAPN12Q6ZSI9 719 aa10.72□□□□□ -0.69
COPB1-203ENST00000525214 TNFRSF25Q93038 417 aa10.72□□□□□ -0.69
COPB1-203ENST00000525214 ELOA3CA0A087WX78 387 aaPredicted RBP10.71□□□□□ -0.69
COPB1-203ENST00000525214 ELOA3DA6NLF2 546 aaPredicted RBP10.71□□□□□ -0.69
COPB1-203ENST00000525214 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.69
COPB1-203ENST00000525214 INPP5BP32019 993 aa10.71□□□□□ -0.69
COPB1-203ENST00000525214 ELOA3BQ3SY89 546 aa10.71□□□□□ -0.69
COPB1-203ENST00000525214 ELOA3Q8NG57 546 aa10.71□□□□□ -0.69
COPB1-203ENST00000525214 DCAF5Q96JK2 942 aa10.7□□□□□ -0.7
COPB1-203ENST00000525214 GSX2Q9BZM3 304 aa10.7□□□□□ -0.7
COPB1-203ENST00000525214 SAP130Q9H0E3 1048 aa10.7□□□□□ -0.7
COPB1-203ENST00000525214 COL8A1P27658 744 aa10.69□□□□□ -0.7
COPB1-203ENST00000525214 BHMTQ93088 406 aa10.69□□□□□ -0.7
COPB1-203ENST00000525214 MKNK1Q9BUB5 465 aa10.69□□□□□ -0.7
COPB1-203ENST00000525214 SUV39H2Q9H5I1 410 aa10.69□□□□□ -0.7
COPB1-203ENST00000525214 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.69□□□□□ -0.7
COPB1-203ENST00000525214 MICAL2O94851 1124 aa10.68□□□□□ -0.7
COPB1-203ENST00000525214 COL26A1Q96A83 441 aa10.68□□□□□ -0.7
COPB1-203ENST00000525214 IFT43Q96FT9 208 aa10.68□□□□□ -0.7
COPB1-203ENST00000525214 NEUROD1Q13562 356 aa10.67□□□□□ -0.7
COPB1-203ENST00000525214 FAM26DQ5JW98 314 aa10.67□□□□□ -0.7
COPB1-203ENST00000525214 STARD13Q9Y3M8 1113 aa10.67□□□□□ -0.7
COPB1-203ENST00000525214 OPLAHO14841 1288 aa10.66□□□□□ -0.7
COPB1-203ENST00000525214 ITGB2P05107 769 aa10.66□□□□□ -0.7
COPB1-203ENST00000525214 ARSDP51689 593 aa10.66□□□□□ -0.7
COPB1-203ENST00000525214 GNB5O14775 395 aa10.65□□□□□ -0.7
COPB1-203ENST00000525214 ADH7P40394 386 aa10.65□□□□□ -0.7
COPB1-203ENST00000525214 CCINQ13939 588 aa10.65□□□□□ -0.7
COPB1-203ENST00000525214 C16orf46Q6P387 395 aa10.65□□□□□ -0.7
COPB1-203ENST00000525214 ETFBKMTQ8IXQ9 262 aa10.65□□□□□ -0.7
COPB1-203ENST00000525214 USP20Q9Y2K6 914 aa10.65□□□□□ -0.7
COPB1-203ENST00000525214 TNFRSF10BO14763 440 aa10.64□□□□□ -0.71
COPB1-203ENST00000525214 EPB42P16452 691 aa10.64□□□□□ -0.71
COPB1-203ENST00000525214 ALAS2P22557 587 aa10.64□□□□□ -0.71
COPB1-203ENST00000525214 ATP2B4P23634 1241 aa10.64□□□□□ -0.71
COPB1-203ENST00000525214 TREML1Q86YW5 311 aa10.64□□□□□ -0.71
COPB1-203ENST00000525214 TRIM11Q96F44 468 aa10.64□□□□□ -0.71
COPB1-203ENST00000525214 TMEM88BA6NKF7 163 aa10.63□□□□□ -0.71
COPB1-203ENST00000525214 PPP1R15AO75807 674 aaPredicted RBP10.63□□□□□ -0.71
COPB1-203ENST00000525214 NFKB1P19838 968 aa10.63□□□□□ -0.71
COPB1-203ENST00000525214 NAA30Q147X3 362 aaPredicted RBP10.63□□□□□ -0.71
COPB1-203ENST00000525214 EFCC1Q9HA90 598 aa10.63□□□□□ -0.71
COPB1-203ENST00000525214 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.63□□□□□ -0.71
COPB1-203ENST00000525214 ALBP02768 609 aa10.62□□□□□ -0.71
COPB1-203ENST00000525214 PLA2G4EQ3MJ16 856 aa10.62□□□□□ -0.71
COPB1-203ENST00000525214 ZFATQ9P243 1243 aa10.62□□□□□ -0.71
COPB1-203ENST00000525214 RTCBQ9Y3I0 505 aaKnown RBP10.62□□□□□ -0.71
COPB1-203ENST00000525214 KRBA1A5PL33 1030 aa10.61□□□□□ -0.71
COPB1-203ENST00000525214 PTCD1O75127 700 aaKnown RBP10.61□□□□□ -0.71
COPB1-203ENST00000525214 COL9A3Q14050 684 aaPredicted RBP10.61□□□□□ -0.71
COPB1-203ENST00000525214 M0R082 166 aa10.6□□□□□ -0.71
COPB1-203ENST00000525214 C20orf204Q6ZNR8 217 aa10.6□□□□□ -0.71
COPB1-203ENST00000525214 C8orf86Q6ZUL3 223 aa10.6□□□□□ -0.71
COPB1-203ENST00000525214 MICALL1Q8N3F8 863 aa10.6□□□□□ -0.71
COPB1-203ENST00000525214 ZNF417Q8TAU3 575 aa10.6□□□□□ -0.71
COPB1-203ENST00000525214 PNMA5Q96PV4 448 aa10.6□□□□□ -0.71
COPB1-203ENST00000525214 ZNF587Q96SQ5 575 aaPredicted RBP10.6□□□□□ -0.71
COPB1-203ENST00000525214 UBE2OQ9C0C9 1292 aaKnown RBP10.6□□□□□ -0.71
COPB1-203ENST00000525214 C11orf16Q9NQ32 467 aa10.6□□□□□ -0.71
COPB1-203ENST00000525214 SEPT3Q9UH03 358 aa10.6□□□□□ -0.71
COPB1-203ENST00000525214 SLC6A14Q9UN76 642 aa10.6□□□□□ -0.71
COPB1-203ENST00000525214 PIK3R2O00459 728 aa10.59□□□□□ -0.71
COPB1-203ENST00000525214 BRD2P25440 801 aaKnown RBP10.59□□□□□ -0.71
COPB1-203ENST00000525214 TARSP26639 723 aaKnown RBP10.59□□□□□ -0.71
COPB1-203ENST00000525214 SCNN1AP37088 669 aa10.59□□□□□ -0.71
COPB1-203ENST00000525214 TBC1D8BQ0IIM8 1120 aa10.59□□□□□ -0.71
COPB1-203ENST00000525214 GPAT2Q6NUI2 795 aa10.59□□□□□ -0.71
COPB1-203ENST00000525214 KRT25Q7Z3Z0 450 aa10.59□□□□□ -0.71
COPB1-203ENST00000525214 RGL4Q8IZJ4 473 aa10.59□□□□□ -0.71
COPB1-203ENST00000525214 DNAJB12Q9NXW2 375 aaKnown RBP10.59□□□□□ -0.71
COPB1-203ENST00000525214 NAGPAQ9UK23 515 aa10.59□□□□□ -0.71
COPB1-203ENST00000525214 KCNMB2Q9Y691 235 aa10.59□□□□□ -0.71
COPB1-203ENST00000525214 SASH3O75995 380 aa10.58□□□□□ -0.72
COPB1-203ENST00000525214 IGFLR1Q9H665 355 aa10.58□□□□□ -0.72
COPB1-203ENST00000525214 PRDM6Q9NQX0 595 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms