RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 SUSD4Q5VX71 490 aa12.32□□□□□ -0.44
SF3B2-204ENST00000525207 RRAGCQ9HB90 399 aa12.32□□□□□ -0.44
SF3B2-204ENST00000525207 DDX21Q9NR30 783 aaKnown RBP eCLIP12.32□□□□□ -0.44
SF3B2-204ENST00000525207 CHPF2Q9P2E5 772 aa12.32□□□□□ -0.44
SF3B2-204ENST00000525207 RNF123Q5XPI4 1314 aa12.32□□□□□ -0.44
SF3B2-204ENST00000525207 SCN4AP35499 1836 aa12.32□□□□□ -0.44
SF3B2-204ENST00000525207 LRRC37AA6NMS7 1700 aa12.31□□□□□ -0.44
SF3B2-204ENST00000525207 APAF1O14727 1248 aa12.31□□□□□ -0.44
SF3B2-204ENST00000525207 ZNF853P0CG23 659 aa12.31□□□□□ -0.44
SF3B2-204ENST00000525207 FKBP4Q02790 459 aaKnown RBP eCLIP12.31□□□□□ -0.44
SF3B2-204ENST00000525207 HDGFL1Q5TGJ6 251 aa12.31□□□□□ -0.44
SF3B2-204ENST00000525207 OLFM4Q6UX06 510 aa12.31□□□□□ -0.44
SF3B2-204ENST00000525207 PPP1R42Q7Z4L9 355 aa12.31□□□□□ -0.44
SF3B2-204ENST00000525207 XAGE3Q8WTP9 111 aa12.31□□□□□ -0.44
SF3B2-204ENST00000525207 MBIPQ9NS73 344 aa12.31□□□□□ -0.44
SF3B2-204ENST00000525207 COL4A5P29400 1685 aa12.3□□□□□ -0.44
SF3B2-204ENST00000525207 ALDH1B1P30837 517 aa12.3□□□□□ -0.44
SF3B2-204ENST00000525207 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-204ENST00000525207 APLP1P51693 650 aa12.3□□□□□ -0.44
SF3B2-204ENST00000525207 FSTL1Q12841 308 aa12.3□□□□□ -0.44
SF3B2-204ENST00000525207 HSP90AB3PQ58FF7 597 aa12.3□□□□□ -0.44
SF3B2-204ENST00000525207 COPS6Q7L5N1 327 aa12.3□□□□□ -0.44
SF3B2-204ENST00000525207 RPGRQ92834 1020 aaKnown RBP12.3□□□□□ -0.44
SF3B2-204ENST00000525207 IFT57Q9NWB7 429 aa12.3□□□□□ -0.44
SF3B2-204ENST00000525207 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
SF3B2-204ENST00000525207 CALD1Q05682 793 aaKnown RBP12.29□□□□□ -0.44
SF3B2-204ENST00000525207 AIMP1Q12904 312 aaKnown RBP12.29□□□□□ -0.44
SF3B2-204ENST00000525207 CCDC184Q52MB2 194 aa12.29□□□□□ -0.44
SF3B2-204ENST00000525207 C3orf67Q6ZVT6 689 aa12.29□□□□□ -0.44
SF3B2-204ENST00000525207 RTKN2Q8IZC4 609 aa12.29□□□□□ -0.44
SF3B2-204ENST00000525207 UTP14AQ9BVJ6 771 aaKnown RBP12.29□□□□□ -0.44
SF3B2-204ENST00000525207 ADAMTSL1Q8N6G6 1762 aa12.28□□□□□ -0.44
SF3B2-204ENST00000525207 TAF1P21675 1872 aa12.28□□□□□ -0.44
SF3B2-204ENST00000525207 VEGFAP15692 232 aaPredicted RBP12.28□□□□□ -0.44
SF3B2-204ENST00000525207 DUSP27Q5VZP5 1158 aa12.28□□□□□ -0.44
SF3B2-204ENST00000525207 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
SF3B2-204ENST00000525207 NLRP10Q86W26 655 aa12.28□□□□□ -0.44
SF3B2-204ENST00000525207 SMC1BQ8NDV3 1235 aa12.28□□□□□ -0.44
SF3B2-204ENST00000525207 ZNF277Q9NRM2 450 aaPredicted RBP12.28□□□□□ -0.44
SF3B2-204ENST00000525207 DBF4Q9UBU7 674 aaPredicted RBP12.28□□□□□ -0.44
SF3B2-204ENST00000525207 POTECB2RU33 542 aa12.27□□□□□ -0.45
SF3B2-204ENST00000525207 IARSP41252 1262 aaKnown RBP12.27□□□□□ -0.45
SF3B2-204ENST00000525207 GNAI1P63096 354 aa12.27□□□□□ -0.45
SF3B2-204ENST00000525207 TCIRG1Q13488 830 aa12.27□□□□□ -0.45
SF3B2-204ENST00000525207 CC2D2BQ6DHV5 1058 aa12.27□□□□□ -0.45
SF3B2-204ENST00000525207 SLC51AQ86UW1 340 aa12.27□□□□□ -0.45
SF3B2-204ENST00000525207 PLBD2Q8NHP8 589 aa12.27□□□□□ -0.45
SF3B2-204ENST00000525207 CRAMP1Q96RY5 1269 aa12.27□□□□□ -0.45
SF3B2-204ENST00000525207 PSMD1Q99460 953 aa12.27□□□□□ -0.45
SF3B2-204ENST00000525207 ZNF541Q9H0D2 1346 aa12.27□□□□□ -0.45
SF3B2-204ENST00000525207 DUOX1Q9NRD9 1551 aa12.26□□□□□ -0.45
SF3B2-204ENST00000525207 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
SF3B2-204ENST00000525207 DDNO94850 711 aaPredicted RBP12.26□□□□□ -0.45
SF3B2-204ENST00000525207 SLC10A5Q5PT55 438 aa12.26□□□□□ -0.45
SF3B2-204ENST00000525207 RBM17Q96I25 401 aaKnown RBP12.26□□□□□ -0.45
SF3B2-204ENST00000525207 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
SF3B2-204ENST00000525207 NLRP3Q96P20 1036 aa12.26□□□□□ -0.45
SF3B2-204ENST00000525207 HYPKQ9NX55 129 aa12.26□□□□□ -0.45
SF3B2-204ENST00000525207 ABCC4O15439 1325 aa12.26□□□□□ -0.45
SF3B2-204ENST00000525207 SH3TC1Q8TE82 1336 aa12.26□□□□□ -0.45
SF3B2-204ENST00000525207 COL4A1P02462 1669 aa12.26□□□□□ -0.45
SF3B2-204ENST00000525207 LTBP1Q14766 1721 aa12.25□□□□□ -0.45
SF3B2-204ENST00000525207 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
SF3B2-204ENST00000525207 HCLS1P14317 486 aaPredicted RBP12.24□□□□□ -0.45
SF3B2-204ENST00000525207 CCDC27Q2M243 656 aa12.24□□□□□ -0.45
SF3B2-204ENST00000525207 GRIPAP1Q4V328 841 aa12.24□□□□□ -0.45
SF3B2-204ENST00000525207 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
SF3B2-204ENST00000525207 SYNE4Q8N205 404 aa12.24□□□□□ -0.45
SF3B2-204ENST00000525207 ISCA1Q9BUE6 129 aa12.24□□□□□ -0.45
SF3B2-204ENST00000525207 MRS2Q9HD23 443 aa12.24□□□□□ -0.45
SF3B2-204ENST00000525207 TRMT112Q9UI30 125 aaKnown RBP12.24□□□□□ -0.45
SF3B2-204ENST00000525207 MYH3P11055 1940 aa12.23□□□□□ -0.45
SF3B2-204ENST00000525207 FZD9O00144 591 aa12.23□□□□□ -0.45
SF3B2-204ENST00000525207 ANP32CO43423 234 aa12.23□□□□□ -0.45
SF3B2-204ENST00000525207 CACNA1FO60840 1977 aa12.23□□□□□ -0.45
SF3B2-204ENST00000525207 IQCA1LA6NCM1 817 aa12.22□□□□□ -0.45
SF3B2-204ENST00000525207 ELL2O00472 640 aaPredicted RBP12.22□□□□□ -0.45
SF3B2-204ENST00000525207 ZBTB22O15209 634 aa12.22□□□□□ -0.45
SF3B2-204ENST00000525207 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
SF3B2-204ENST00000525207 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
SF3B2-204ENST00000525207 HTRA3P83110 453 aa12.22□□□□□ -0.45
SF3B2-204ENST00000525207 GOLGA2Q08379 1002 aa12.22□□□□□ -0.45
SF3B2-204ENST00000525207 DNAJC5GQ8N7S2 189 aa12.22□□□□□ -0.45
SF3B2-204ENST00000525207 C8orf58Q8NAV2 365 aa12.22□□□□□ -0.45
SF3B2-204ENST00000525207 PHAXQ9H814 394 aaKnown RBP12.22□□□□□ -0.45
SF3B2-204ENST00000525207 ATP6V0A2Q9Y487 856 aa12.22□□□□□ -0.45
SF3B2-204ENST00000525207 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.45
SF3B2-204ENST00000525207 GRAPQ13588 217 aa12.21□□□□□ -0.45
SF3B2-204ENST00000525207 WWC1Q8IX03 1113 aa12.21□□□□□ -0.45
SF3B2-204ENST00000525207 TSPYL6Q8N831 410 aa12.21□□□□□ -0.45
SF3B2-204ENST00000525207 GRAPLQ8TC17 118 aaPredicted RBP12.21□□□□□ -0.45
SF3B2-204ENST00000525207 JDP2Q8WYK2 163 aa12.21□□□□□ -0.45
SF3B2-204ENST00000525207 TSR2Q969E8 191 aaKnown RBP12.21□□□□□ -0.45
SF3B2-204ENST00000525207 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
SF3B2-204ENST00000525207 IL16Q14005 1332 aa12.2□□□□□ -0.46
SF3B2-204ENST00000525207 TCERG1O14776 1098 aaKnown RBP12.2□□□□□ -0.46
SF3B2-204ENST00000525207 TRIM28Q13263 835 aaKnown RBP12.2□□□□□ -0.46
SF3B2-204ENST00000525207 CCDC30Q5VVM6 783 aa12.2□□□□□ -0.46
SF3B2-204ENST00000525207 DDX46Q7L014 1031 aaKnown RBP12.2□□□□□ -0.46
SF3B2-204ENST00000525207 RIC3Q7Z5B4 369 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms