RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 HSPA4P34932 840 aa5.92□□□□□ -1.46
CTNNA1-241ENST00000524127 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-241ENST00000524127 AEBP1Q8IUX7 1158 aa5.92□□□□□ -1.46
CTNNA1-241ENST00000524127 LTV1Q96GA3 475 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-241ENST00000524127 ZSCAN31Q96LW9 406 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-241ENST00000524127 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-241ENST00000524127 CCDC171Q6TFL3 1326 aa5.92□□□□□ -1.46
CTNNA1-241ENST00000524127 DLG5Q8TDM6 1919 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 TNS2Q63HR2 1409 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 NUP188Q5SRE5 1749 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 PXDNLA1KZ92 1463 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 N4BP2Q86UW6 1770 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 BTAF1O14981 1849 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 ITGB4P16144 1822 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 RIOK3O14730 519 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 SMARCA5O60264 1052 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 F13A1P00488 732 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 GNAI3P08754 354 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 CCDC192P0DO97 292 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 ATP2B3Q16720 1220 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 TTC14Q96N46 770 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 MEIS3Q99687 375 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 THUMPD2Q9BTF0 503 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 LRRCC1Q9C099 1032 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 TTC12Q9H892 705 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 CGNQ9P2M7 1197 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 THRAP3Q9Y2W1 955 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 PAXBP1Q9Y5B6 917 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 ELP1O95163 1332 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 NHSQ6T4R5 1651 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 FLT4P35916 1363 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 DOT1LQ8TEK3 1739 aa5.91□□□□□ -1.46
CTNNA1-241ENST00000524127 A0A0G2JS52 829 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 ELL2O00472 640 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 KCNQ2O43526 872 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 STX6O43752 255 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 NEMFO60524 1076 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 RAB11FIP3O75154 756 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 TRIM37O94972 964 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 CSB-PGBD3P0DP91 1061 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 CDC25BP30305 580 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 AMPHP49418 695 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 CBX1P83916 185 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 ATP8B2P98198 1209 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 FAM200AQ8TCP9 573 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 KCNB2Q92953 911 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 TM6SF1Q9BZW5 370 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 KCNF1Q9H3M0 494 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 ANO2Q9NQ90 1003 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 PRDM10Q9NQV6 1147 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 SH2B1Q9NRF2 756 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 NLRP2Q9NX02 1062 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 PALD1Q9ULE6 856 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 LIMCH1Q9UPQ0 1083 aa5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 MORC2Q9Y6X9 1032 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-241ENST00000524127 RAD50Q92878 1312 aa5.9□□□□□ -1.47
CTNNA1-241ENST00000524127 OVOS2A0A0G2JMS6 1433 aa5.9□□□□□ -1.47
CTNNA1-241ENST00000524127 HMOX1P09601 288 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 HCLS1P14317 486 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 SYT1P21579 422 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 EN1Q05925 392 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 EIF4A2Q14240 407 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 SLFNL1Q499Z3 407 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 RNF20Q5VTR2 975 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 RBM43Q6ZSC3 357 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 PROM2Q8N271 834 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 RTF1Q92541 710 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 CHAMP1Q96JM3 812 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 ZNF830Q96NB3 372 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 CAMKK2Q96RR4 588 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 EYA1Q99502 592 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 KCND1Q9NSA2 647 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 BABAM1Q9NWV8 329 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 CTNNA3Q9UI47 895 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 DDX41Q9UJV9 622 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 ZHX1Q9UKY1 873 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 PYCARDQ9ULZ3 195 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 SMC3Q9UQE7 1217 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 USP42Q9H9J4 1324 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 BCL9O00512 1426 aa5.89□□□□□ -1.47
CTNNA1-241ENST00000524127 RGPD3A6NKT7 1758 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 RGPD4Q7Z3J3 1758 aa5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 CCDC66A2RUB6 948 aa5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 SGSM2O43147 1006 aa5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 HTATSF1O43719 755 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 IL2RBP14784 551 aa5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 PDCP20941 246 aa5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 NCBP1Q09161 790 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 DHX8Q14562 1220 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 EZH2Q15910 746 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 DDB1Q16531 1140 aa5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 MAP3K11Q16584 847 aa5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 VPS53Q5VIR6 699 aa5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 FOXD4L5Q5VV16 416 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 PLA2G4DQ86XP0 818 aa5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 TDRD7Q8NHU6 1098 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 FOXD4L4Q8WXT5 416 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 LSG1Q9H089 658 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 ALDH8A1Q9H2A2 487 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-241ENST00000524127 DDX19AQ9NUU7 478 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms