RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-208ENST00000523263 CA12O43570 354 aa12.66□□□□□ -0.38
VIRMA-208ENST00000523263 GTF2E1P29083 439 aaPredicted RBP12.66□□□□□ -0.38
VIRMA-208ENST00000523263 PIP4K2AP48426 406 aaPredicted RBP12.66□□□□□ -0.38
VIRMA-208ENST00000523263 SCNN1DP51172 638 aa12.66□□□□□ -0.38
VIRMA-208ENST00000523263 CST9Q5W186 159 aa12.66□□□□□ -0.38
VIRMA-208ENST00000523263 HHIPL1Q96JK4 782 aa12.66□□□□□ -0.38
VIRMA-208ENST00000523263 THSD7BQ9C0I4 1608 aa12.66□□□□□ -0.38
VIRMA-208ENST00000523263 PRKAR2BP31323 418 aa12.65□□□□□ -0.38
VIRMA-208ENST00000523263 EPS15P42566 896 aa12.65□□□□□ -0.38
VIRMA-208ENST00000523263 HLFQ16534 295 aa12.65□□□□□ -0.38
VIRMA-208ENST00000523263 RTF1Q92541 710 aaKnown RBP12.65□□□□□ -0.38
VIRMA-208ENST00000523263 CRAMP1Q96RY5 1269 aa12.65□□□□□ -0.38
VIRMA-208ENST00000523263 IBTKQ9P2D0 1353 aaPredicted RBP12.65□□□□□ -0.38
VIRMA-208ENST00000523263 CYP4F22Q6NT55 531 aa12.64□□□□□ -0.39
VIRMA-208ENST00000523263 PGAP2Q9UHJ9 254 aa12.64□□□□□ -0.39
VIRMA-208ENST00000523263 TAF7Q15545 349 aaPredicted RBP12.63□□□□□ -0.39
VIRMA-208ENST00000523263 LARGE2Q8N3Y3 721 aa12.63□□□□□ -0.39
VIRMA-208ENST00000523263 CFAP53Q96M91 514 aa12.63□□□□□ -0.39
VIRMA-208ENST00000523263 ADARB2Q9NS39 739 aaKnown RBP12.63□□□□□ -0.39
VIRMA-208ENST00000523263 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
VIRMA-208ENST00000523263 GJA3Q9Y6H8 435 aa12.63□□□□□ -0.39
VIRMA-208ENST00000523263 CCDC85CA6NKD9 419 aa12.62□□□□□ -0.39
VIRMA-208ENST00000523263 FAM177BA6PVY3 158 aa12.62□□□□□ -0.39
VIRMA-208ENST00000523263 SAPCD2Q86UD0 394 aa12.62□□□□□ -0.39
VIRMA-208ENST00000523263 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
VIRMA-208ENST00000523263 RPGRQ92834 1020 aaKnown RBP12.62□□□□□ -0.39
VIRMA-208ENST00000523263 RBM17Q96I25 401 aaKnown RBP12.62□□□□□ -0.39
VIRMA-208ENST00000523263 MAP3K15Q6ZN16 1313 aa12.62□□□□□ -0.39
VIRMA-208ENST00000523263 CDHR2Q9BYE9 1310 aa12.62□□□□□ -0.39
VIRMA-208ENST00000523263 COL4A5P29400 1685 aa12.61□□□□□ -0.39
VIRMA-208ENST00000523263 ABCC12Q96J65 1359 aa12.61□□□□□ -0.39
VIRMA-208ENST00000523263 BRPF1P55201 1214 aaPredicted RBP12.61□□□□□ -0.39
VIRMA-208ENST00000523263 FMR1Q06787 632 aaKnown RBP eCLIP12.61□□□□□ -0.39
VIRMA-208ENST00000523263 MCM10Q7L590 875 aa12.61□□□□□ -0.39
VIRMA-208ENST00000523263 NIM1KQ8IY84 436 aa12.61□□□□□ -0.39
VIRMA-208ENST00000523263 RTFDC1Q9BY42 306 aaPredicted RBP12.61□□□□□ -0.39
VIRMA-208ENST00000523263 PCGF6Q9BYE7 350 aa12.61□□□□□ -0.39
VIRMA-208ENST00000523263 GPRC5DQ9NZD1 345 aa12.61□□□□□ -0.39
VIRMA-208ENST00000523263 LTBP1Q14766 1721 aa12.6□□□□□ -0.39
VIRMA-208ENST00000523263 TRAF5O00463 557 aa12.6□□□□□ -0.39
VIRMA-208ENST00000523263 PAXIP1Q6ZW49 1069 aaPredicted RBP12.6□□□□□ -0.39
VIRMA-208ENST00000523263 NUTM1Q86Y26 1132 aa12.6□□□□□ -0.39
VIRMA-208ENST00000523263 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
VIRMA-208ENST00000523263 SUPT20HQ8NEM7 779 aa12.6□□□□□ -0.39
VIRMA-208ENST00000523263 PNISRQ8TF01 805 aaKnown RBP12.6□□□□□ -0.39
VIRMA-208ENST00000523263 PPEF1O14829 653 aaPredicted RBP12.59□□□□□ -0.39
VIRMA-208ENST00000523263 SLC10A5Q5PT55 438 aa12.59□□□□□ -0.39
VIRMA-208ENST00000523263 MCOLN1Q9GZU1 580 aa12.59□□□□□ -0.39
VIRMA-208ENST00000523263 ZNRF3Q9ULT6 936 aa12.59□□□□□ -0.39
VIRMA-208ENST00000523263 ATP6V0A2Q9Y487 856 aa12.59□□□□□ -0.39
VIRMA-208ENST00000523263 CACNA1SQ13698 1873 aa12.59□□□□□ -0.39
VIRMA-208ENST00000523263 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
VIRMA-208ENST00000523263 AOC2O75106 756 aa12.58□□□□□ -0.4
VIRMA-208ENST00000523263 CELF2O95319 508 aaKnown RBP12.58□□□□□ -0.4
VIRMA-208ENST00000523263 NTSR2O95665 410 aa12.58□□□□□ -0.4
VIRMA-208ENST00000523263 CXCL9Q07325 125 aa12.58□□□□□ -0.4
VIRMA-208ENST00000523263 PARP10Q53GL7 1025 aa12.58□□□□□ -0.4
VIRMA-208ENST00000523263 SUSD4Q5VX71 490 aa12.58□□□□□ -0.4
VIRMA-208ENST00000523263 GIGYF2Q6Y7W6 1299 aaKnown RBP12.58□□□□□ -0.4
VIRMA-208ENST00000523263 KIF6Q6ZMV9 814 aa12.58□□□□□ -0.4
VIRMA-208ENST00000523263 TMX4Q9H1E5 349 aaPredicted RBP12.58□□□□□ -0.4
VIRMA-208ENST00000523263 ERBB4Q15303 1308 aa12.58□□□□□ -0.4
VIRMA-208ENST00000523263 UBN2Q6ZU65 1347 aa12.58□□□□□ -0.4
VIRMA-208ENST00000523263 BBOX1O75936 387 aa12.57□□□□□ -0.4
VIRMA-208ENST00000523263 U2AF1L5P0DN76 240 aaPredicted RBP12.57□□□□□ -0.4
VIRMA-208ENST00000523263 U2AF1Q01081 240 aaKnown RBP eCLIP12.57□□□□□ -0.4
VIRMA-208ENST00000523263 DCTN1Q14203 1278 aa12.57□□□□□ -0.4
VIRMA-208ENST00000523263 TTLL7Q6ZT98 887 aa12.57□□□□□ -0.4
VIRMA-208ENST00000523263 CDC37L1Q7L3B6 337 aa12.57□□□□□ -0.4
VIRMA-208ENST00000523263 PPP1R42Q7Z4L9 355 aa12.57□□□□□ -0.4
VIRMA-208ENST00000523263 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
VIRMA-208ENST00000523263 EIF4A1P60842 406 aaKnown RBP12.56□□□□□ -0.4
VIRMA-208ENST00000523263 KIAA2012Q0VF49 1180 aa12.56□□□□□ -0.4
VIRMA-208ENST00000523263 NOGQ13253 232 aa12.56□□□□□ -0.4
VIRMA-208ENST00000523263 GRM1Q13255 1194 aa12.56□□□□□ -0.4
VIRMA-208ENST00000523263 AOC3Q16853 763 aa12.56□□□□□ -0.4
VIRMA-208ENST00000523263 CIAPIN1Q6FI81 312 aa12.56□□□□□ -0.4
VIRMA-208ENST00000523263 SP8Q8IXZ3 490 aa12.56□□□□□ -0.4
VIRMA-208ENST00000523263 GMPSP49915 693 aaPredicted RBP12.55□□□□□ -0.4
VIRMA-208ENST00000523263 TNIP1Q15025 636 aa12.55□□□□□ -0.4
VIRMA-208ENST00000523263 GLIS2Q9BZE0 524 aaPredicted RBP12.55□□□□□ -0.4
VIRMA-208ENST00000523263 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
VIRMA-208ENST00000523263 RRP7AQ9Y3A4 280 aaKnown RBP12.55□□□□□ -0.4
VIRMA-208ENST00000523263 GPTP24298 496 aa12.54□□□□□ -0.4
VIRMA-208ENST00000523263 HIRAP54198 1017 aaPredicted RBP12.54□□□□□ -0.4
VIRMA-208ENST00000523263 DGKZQ13574 1117 aa12.54□□□□□ -0.4
VIRMA-208ENST00000523263 C3orf67Q6ZVT6 689 aa12.54□□□□□ -0.4
VIRMA-208ENST00000523263 NGEFQ8N5V2 710 aa12.54□□□□□ -0.4
VIRMA-208ENST00000523263 SAGE1Q9NXZ1 904 aa12.54□□□□□ -0.4
VIRMA-208ENST00000523263 MIS18AQ9NYP9 233 aa12.54□□□□□ -0.4
VIRMA-208ENST00000523263 PPP2R1AP30153 589 aa12.53□□□□□ -0.4
VIRMA-208ENST00000523263 TMC4Q7Z404 712 aa12.53□□□□□ -0.4
VIRMA-208ENST00000523263 MPNDQ8N594 471 aa12.53□□□□□ -0.4
VIRMA-208ENST00000523263 DPF2Q92785 391 aa12.53□□□□□ -0.4
VIRMA-208ENST00000523263 UTP14AQ9BVJ6 771 aaKnown RBP12.53□□□□□ -0.4
VIRMA-208ENST00000523263 ZBTB3Q9H5J0 574 aa12.53□□□□□ -0.4
VIRMA-208ENST00000523263 H7C1D1 291 aa12.52□□□□□ -0.41
VIRMA-208ENST00000523263 TCERG1O14776 1098 aaKnown RBP12.52□□□□□ -0.41
VIRMA-208ENST00000523263 DPP8Q6V1X1 898 aaPredicted RBP12.52□□□□□ -0.41
VIRMA-208ENST00000523263 LRP10Q7Z4F1 713 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms