RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 PARP10Q53GL7 1025 aa16.12■□□□□ 0.17
VEGFA-223ENST00000523125 HDGFL1Q5TGJ6 251 aa16.12■□□□□ 0.17
VEGFA-223ENST00000523125 DUSP27Q5VZP5 1158 aa16.12■□□□□ 0.17
VEGFA-223ENST00000523125 C3orf67Q6ZVT6 689 aa16.12■□□□□ 0.17
VEGFA-223ENST00000523125 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
VEGFA-223ENST00000523125 TAF1P21675 1872 aa16.12■□□□□ 0.17
VEGFA-223ENST00000523125 CCDC93Q567U6 631 aa16.11■□□□□ 0.17
VEGFA-223ENST00000523125 PPP1R42Q7Z4L9 355 aa16.11■□□□□ 0.17
VEGFA-223ENST00000523125 RBM46Q8TBY0 533 aaKnown RBP16.11■□□□□ 0.17
VEGFA-223ENST00000523125 DDX60Q8IY21 1712 aaKnown RBP16.11■□□□□ 0.17
VEGFA-223ENST00000523125 POTECB2RU33 542 aa16.1■□□□□ 0.17
VEGFA-223ENST00000523125 GNAI1P63096 354 aa16.1■□□□□ 0.17
VEGFA-223ENST00000523125 TCIRG1Q13488 830 aa16.1■□□□□ 0.17
VEGFA-223ENST00000523125 SLC10A5Q5PT55 438 aa16.1■□□□□ 0.17
VEGFA-223ENST00000523125 NLRP10Q86W26 655 aa16.1■□□□□ 0.17
VEGFA-223ENST00000523125 DBF4Q9UBU7 674 aaPredicted RBP16.1■□□□□ 0.17
VEGFA-223ENST00000523125 FKBP4Q02790 459 aaKnown RBP eCLIP16.09■□□□□ 0.17
VEGFA-223ENST00000523125 CALD1Q05682 793 aaKnown RBP16.09■□□□□ 0.17
VEGFA-223ENST00000523125 HSP90AB3PQ58FF7 597 aa16.09■□□□□ 0.17
VEGFA-223ENST00000523125 SYNE4Q8N205 404 aa16.09■□□□□ 0.17
VEGFA-223ENST00000523125 UTP14AQ9BVJ6 771 aaKnown RBP16.09■□□□□ 0.17
VEGFA-223ENST00000523125 VEGFAP15692 232 aaPredicted RBP16.08■□□□□ 0.16
VEGFA-223ENST00000523125 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
VEGFA-223ENST00000523125 SLC51AQ86UW1 340 aa16.08■□□□□ 0.16
VEGFA-223ENST00000523125 C16orf71Q8IYS4 520 aaPredicted RBP16.08■□□□□ 0.16
VEGFA-223ENST00000523125 RTKN2Q8IZC4 609 aa16.08■□□□□ 0.16
VEGFA-223ENST00000523125 C8orf58Q8NAV2 365 aa16.08■□□□□ 0.16
VEGFA-223ENST00000523125 PLBD2Q8NHP8 589 aa16.08■□□□□ 0.16
VEGFA-223ENST00000523125 RPGRQ92834 1020 aaKnown RBP16.08■□□□□ 0.16
VEGFA-223ENST00000523125 CRAMP1Q96RY5 1269 aa16.08■□□□□ 0.16
VEGFA-223ENST00000523125 ELL2O00472 640 aaPredicted RBP16.07■□□□□ 0.16
VEGFA-223ENST00000523125 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
VEGFA-223ENST00000523125 ZNF277Q9NRM2 450 aaPredicted RBP16.07■□□□□ 0.16
VEGFA-223ENST00000523125 HYPKQ9NX55 129 aa16.07■□□□□ 0.16
VEGFA-223ENST00000523125 RNF123Q5XPI4 1314 aa16.07■□□□□ 0.16
VEGFA-223ENST00000523125 SCN4AP35499 1836 aa16.06■□□□□ 0.16
VEGFA-223ENST00000523125 ANP32CO43423 234 aa16.06■□□□□ 0.16
VEGFA-223ENST00000523125 FSTL1Q12841 308 aa16.06■□□□□ 0.16
VEGFA-223ENST00000523125 CCDC27Q2M243 656 aa16.06■□□□□ 0.16
VEGFA-223ENST00000523125 NLRP3Q96P20 1036 aa16.06■□□□□ 0.16
VEGFA-223ENST00000523125 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
VEGFA-223ENST00000523125 COL4A5P29400 1685 aa16.05■□□□□ 0.16
VEGFA-223ENST00000523125 DDNO94850 711 aaPredicted RBP16.05■□□□□ 0.16
VEGFA-223ENST00000523125 WWC1Q8IX03 1113 aa16.05■□□□□ 0.16
VEGFA-223ENST00000523125 ZNF428Q96B54 188 aa16.05■□□□□ 0.16
VEGFA-223ENST00000523125 RBM17Q96I25 401 aaKnown RBP16.05■□□□□ 0.16
VEGFA-223ENST00000523125 PSMD1Q99460 953 aa16.05■□□□□ 0.16
VEGFA-223ENST00000523125 ISCA1Q9BUE6 129 aa16.05■□□□□ 0.16
VEGFA-223ENST00000523125 TRMT112Q9UI30 125 aaKnown RBP16.05■□□□□ 0.16
VEGFA-223ENST00000523125 HCLS1P14317 486 aaPredicted RBP16.04■□□□□ 0.16
VEGFA-223ENST00000523125 APLP1P51693 650 aa16.04■□□□□ 0.16
VEGFA-223ENST00000523125 CC2D2BQ6DHV5 1058 aa16.04■□□□□ 0.16
VEGFA-223ENST00000523125 TSPYL6Q8N831 410 aa16.04■□□□□ 0.16
VEGFA-223ENST00000523125 PHAXQ9H814 394 aaKnown RBP16.04■□□□□ 0.16
VEGFA-223ENST00000523125 SH3TC1Q8TE82 1336 aa16.03■□□□□ 0.16
VEGFA-223ENST00000523125 ATP5J2-PTCD1G3V325 749 aa16.03■□□□□ 0.16
VEGFA-223ENST00000523125 PPEF1O14829 653 aaPredicted RBP16.03■□□□□ 0.16
VEGFA-223ENST00000523125 IARSP41252 1262 aaKnown RBP16.03■□□□□ 0.16
VEGFA-223ENST00000523125 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
VEGFA-223ENST00000523125 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
VEGFA-223ENST00000523125 CACNA1FO60840 1977 aa16.03■□□□□ 0.16
VEGFA-223ENST00000523125 ABCC4O15439 1325 aa16.02■□□□□ 0.16
VEGFA-223ENST00000523125 ZNF541Q9H0D2 1346 aa16.02■□□□□ 0.16
VEGFA-223ENST00000523125 TRIM28Q13263 835 aaKnown RBP16.02■□□□□ 0.16
VEGFA-223ENST00000523125 DNAJC5GQ8N7S2 189 aa16.02■□□□□ 0.16
VEGFA-223ENST00000523125 SMC1BQ8NDV3 1235 aa16.02■□□□□ 0.16
VEGFA-223ENST00000523125 LRRC37AA6NMS7 1700 aa16.02■□□□□ 0.15
VEGFA-223ENST00000523125 FZD9O00144 591 aa16.01■□□□□ 0.15
VEGFA-223ENST00000523125 TCERG1O14776 1098 aaKnown RBP16.01■□□□□ 0.15
VEGFA-223ENST00000523125 GRIPAP1Q4V328 841 aa16.01■□□□□ 0.15
VEGFA-223ENST00000523125 FAM89AQ96GI7 184 aa16.01■□□□□ 0.15
VEGFA-223ENST00000523125 ATP6V0A2Q9Y487 856 aa16.01■□□□□ 0.15
VEGFA-223ENST00000523125 COL4A1P02462 1669 aa16.01■□□□□ 0.15
VEGFA-223ENST00000523125 L3MBTL3Q96JM7 780 aaPredicted RBP16■□□□□ 0.15
VEGFA-223ENST00000523125 IL16Q14005 1332 aa15.99■□□□□ 0.15
VEGFA-223ENST00000523125 BBOX1O75936 387 aa15.99■□□□□ 0.15
VEGFA-223ENST00000523125 HTRA3P83110 453 aa15.99■□□□□ 0.15
VEGFA-223ENST00000523125 CCDC30Q5VVM6 783 aa15.99■□□□□ 0.15
VEGFA-223ENST00000523125 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
VEGFA-223ENST00000523125 ADAMTSL1Q8N6G6 1762 aa15.98■□□□□ 0.15
VEGFA-223ENST00000523125 POTEIP0CG38 1075 aa15.98■□□□□ 0.15
VEGFA-223ENST00000523125 POTEJP0CG39 1038 aa15.98■□□□□ 0.15
VEGFA-223ENST00000523125 GOLGA2Q08379 1002 aa15.98■□□□□ 0.15
VEGFA-223ENST00000523125 SP8Q8IXZ3 490 aa15.98■□□□□ 0.15
VEGFA-223ENST00000523125 LTBP1Q14766 1721 aa15.97■□□□□ 0.15
VEGFA-223ENST00000523125 GRAPQ13588 217 aa15.97■□□□□ 0.15
VEGFA-223ENST00000523125 SF3B3Q15393 1217 aaKnown RBP15.97■□□□□ 0.15
VEGFA-223ENST00000523125 RTL5Q5HYW3 569 aaPredicted RBP15.97■□□□□ 0.15
VEGFA-223ENST00000523125 DDX46Q7L014 1031 aaKnown RBP15.97■□□□□ 0.15
VEGFA-223ENST00000523125 GRAPLQ8TC17 118 aaPredicted RBP15.97■□□□□ 0.15
VEGFA-223ENST00000523125 RTFDC1Q9BY42 306 aaPredicted RBP15.97■□□□□ 0.15
VEGFA-223ENST00000523125 MYH3P11055 1940 aa15.97■□□□□ 0.15
VEGFA-223ENST00000523125 PCNTO95613 3336 aa15.97■□□□□ 0.15
VEGFA-223ENST00000523125 DUOX1Q9NRD9 1551 aa15.96■□□□□ 0.15
VEGFA-223ENST00000523125 TWISTNBQ3B726 338 aaPredicted RBP15.96■□□□□ 0.15
VEGFA-223ENST00000523125 JDP2Q8WYK2 163 aa15.96■□□□□ 0.15
VEGFA-223ENST00000523125 MYD88Q99836 296 aa15.96■□□□□ 0.15
VEGFA-223ENST00000523125 METTL22Q9BUU2 404 aaPredicted RBP15.96■□□□□ 0.15
VEGFA-223ENST00000523125 CHMP4AQ9BY43 222 aa15.96■□□□□ 0.15
VEGFA-223ENST00000523125 TAF1DQ9H5J8 278 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms